| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is 153930594
Identifier: 153930594
GI number: 153930594
Start: 32134
End: 32799
Strand: Reverse
Name: 153930594
Synonym: YpsIP31758_A0010
Alternate gene names: NA
Gene position: 32799-32134 (Counterclockwise)
Preceding gene: 153930601
Following gene: 153930566
Centisome position: 55.9
GC content: 36.04
Gene sequence:
>666_bases ATGTCAGCTGCGGAAGTATTTAAAGCTCATTGCCCCACTTGTGATGGAGTTCGTAACTGTCAAGTTCACGGGAAAATAGA AAAAAACTATGAAATTGATAATGATAATGGTTATATGTCAGTCCAAAGTGAACATAAATTATTGGAGTGTATGGGGTGTG AGAGTATTTTCTATCATGAAATATTAACCAGTAATGAAGGTATAGATTACGATAATTGCCCTCACGGAAATACAGTATTA AATCCTATGGAAAGCACTGTGACATTTCCCTCGCCGAGACAACAAGCCGTTCGTCCGGAGTGGCTATTTGGCTTATTAAC TATTGATAGGCAGTTGTATAATATATTTTGCGAGGTTTATTCAGCTTGTGAACATAAATTATATATCTCAGCATCGATTG GATTACGTACTATATTAGACAGGATAACAGAAATATTAGAAATATATCCCACATTATCATTGGAAGAAAAAATGGAGAAA CTACAAGAAGAGGGACTAATTGTGGCGGTTGAAAAACAACAACTCTTGATTGTTACTAACGCCGAAAATGCAGTTACGCA CGGTTCTTGGTCGCCTAACGAGGCTACATTCATATCTCTTTTGCTTATTGTTGAAGATATTACCCGTAGAATGTTGTTGA ATGATGATAATATAAGCAAAGCATGA
Upstream 100 bases:
>100_bases TACACCGGAAGATGTTGAAATAGAAAAGTTGGCTGGCGCGATTGAAGCCTATGAAAATATACATTATCCAATCAATGATA AAATCTAAATGGAGACTAAA
Downstream 100 bases:
>100_bases ATAACAAATCGCCGCCGTAAGGCGGCATTACTATGCATTTCGTTTCTAGTCGCTAAGTACGATTTTTGACCGATTGTGTC AGGTTGACTTCTAAGATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 220
Protein sequence:
>221_residues MSAAEVFKAHCPTCDGVRNCQVHGKIEKNYEIDNDNGYMSVQSEHKLLECMGCESIFYHEILTSNEGIDYDNCPHGNTVL NPMESTVTFPSPRQQAVRPEWLFGLLTIDRQLYNIFCEVYSACEHKLYISASIGLRTILDRITEILEIYPTLSLEEKMEK LQEEGLIVAVEKQQLLIVTNAENAVTHGSWSPNEATFISLLLIVEDITRRMLLNDDNISKA
Sequences:
>Translated_221_residues MSAAEVFKAHCPTCDGVRNCQVHGKIEKNYEIDNDNGYMSVQSEHKLLECMGCESIFYHEILTSNEGIDYDNCPHGNTVL NPMESTVTFPSPRQQAVRPEWLFGLLTIDRQLYNIFCEVYSACEHKLYISASIGLRTILDRITEILEIYPTLSLEEKMEK LQEEGLIVAVEKQQLLIVTNAENAVTHGSWSPNEATFISLLLIVEDITRRMLLNDDNISKA >Mature_220_residues SAAEVFKAHCPTCDGVRNCQVHGKIEKNYEIDNDNGYMSVQSEHKLLECMGCESIFYHEILTSNEGIDYDNCPHGNTVLN PMESTVTFPSPRQQAVRPEWLFGLLTIDRQLYNIFCEVYSACEHKLYISASIGLRTILDRITEILEIYPTLSLEEKMEKL QEEGLIVAVEKQQLLIVTNAENAVTHGSWSPNEATFISLLLIVEDITRRMLLNDDNISKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25089; Mature: 24958
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAEVFKAHCPTCDGVRNCQVHGKIEKNYEIDNDNGYMSVQSEHKLLECMGCESIFYHE CCHHHHHHHCCCCCCCCCCCEEECEEECCEEECCCCCEEEECHHHHHHHHHCCHHHHHHH ILTSNEGIDYDNCPHGNTVLNPMESTVTFPSPRQQAVRPEWLFGLLTIDRQLYNIFCEVY HHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH SACEHKLYISASIGLRTILDRITEILEIYPTLSLEEKMEKLQEEGLIVAVEKQQLLIVTN HHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCEEEEEEC AENAVTHGSWSPNEATFISLLLIVEDITRRMLLNDDNISKA CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SAAEVFKAHCPTCDGVRNCQVHGKIEKNYEIDNDNGYMSVQSEHKLLECMGCESIFYHE CHHHHHHHCCCCCCCCCCCEEECEEECCEEECCCCCEEEECHHHHHHHHHCCHHHHHHH ILTSNEGIDYDNCPHGNTVLNPMESTVTFPSPRQQAVRPEWLFGLLTIDRQLYNIFCEVY HHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHH SACEHKLYISASIGLRTILDRITEILEIYPTLSLEEKMEKLQEEGLIVAVEKQQLLIVTN HHHCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEEECCEEEEEEC AENAVTHGSWSPNEATFISLLLIVEDITRRMLLNDDNISKA CCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA