| Definition | Yersinia pseudotuberculosis IP 31758 plasmid_59kb, complete sequence. |
|---|---|
| Accession | NC_009704 |
| Length | 58,679 |
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The map label for this gene is 153930590
Identifier: 153930590
GI number: 153930590
Start: 519
End: 1556
Strand: Reverse
Name: 153930590
Synonym: YpsIP31758_A0041
Alternate gene names: NA
Gene position: 1556-519 (Counterclockwise)
Preceding gene: 153930598
Following gene: NA
Centisome position: 2.65
GC content: 42.2
Gene sequence:
>1038_bases GTGCATAGACAGAATTCACCAAGCATCTTTAACGATGCACAATTTATTCATACACAAGAGAAAACTCGGCGCGGAGAAGC TAATGCTCTTCGTAAAGGGGTATCTAAGATTCATCGACGCTATATACCCGCATTTAATGACTCAGTGCCTCGGGGAGCTG CTGGTCAAGTAGTCGCACGTATGCGTAATCATGATTGGAAGCGCAATCAGGCATTATGCGAACTCCGAAAATCGGGCTAT ACCCCATTTAAGAAACGAACTGACCCTAATTTCGTTCCTAAGCCTATGCGCATAACGCCAAGAAGCGAATGCAGAGAAGC ATTAACAGCTCTATCACTTGCATTGGCTGCAAACTGTAACTATGACCCTACGGCTGAGTACCCTTTTGAAGTGATGTGCT CTATTGAGGATTTGGCTCGGAGCATGGGGGTGTTACATGTTTATGAGGATGGCCGTAAGGCTTACGATATTTTACTCAAT GCTTTATCGGTCATTGAACAATTGAATTATTGTGTTGTTCACCGTGAAATTGATCCTGATGTTGGCCAATACAAGCCGAT CAGAATGTGGTTAACCCCACAGTTCTTCTTGTCTCGGGGTTTCCAGATGGATGAGGTTCGGGAGTTATTAAATAAATACC GGCAATGGGCCATAAAAAATGGCTTGAGTGAAAGCCTCAAGAAGAAGTATCAAAGACATTTATTGCGTATGGCTAGATTG GGTATCGATATTGAAAGACGGCACTCACTAAAAAATCTATTACGTAAAATTAAACGTCAGGTTGTTAGTGCTGATTTACA AGATGAGAAAAAAGCGGCTGTTGTCGATATTGGCCAATACCTTGATAAACTGGCTAAAGCGCCTAAAAAAATAAAGAAAG CATCTTTAACACCGTATGAAACTGCATACCAGAGGTGGGCTGAGTCTATGCCTAGATCTGACATTTATAGAATGAAATGG GCAATAGAAAAGGAATATCCAGATCTCAGAGGAGAGGCATACTATAAACTCCTGTTAGAACGAGCTGGAGCCATCTGA
Upstream 100 bases:
>100_bases GAAGGTGACTAGACATCGAGGGGTTAGGTATAAACCTATGAAGGATTATAACGCATGTTTGCTCTAAAACAACCCCATTC TGCCATAAGCACAGGATTAG
Downstream 100 bases:
>100_bases GAGCCACAAACCTCCCCTTCCTATACATAGTGACCGCGATATTTCGCGGTGCTTCTGCTGGCTCGTATAAGCAAATTCAG CCAATTTAGGCGATCTAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MHRQNSPSIFNDAQFIHTQEKTRRGEANALRKGVSKIHRRYIPAFNDSVPRGAAGQVVARMRNHDWKRNQALCELRKSGY TPFKKRTDPNFVPKPMRITPRSECREALTALSLALAANCNYDPTAEYPFEVMCSIEDLARSMGVLHVYEDGRKAYDILLN ALSVIEQLNYCVVHREIDPDVGQYKPIRMWLTPQFFLSRGFQMDEVRELLNKYRQWAIKNGLSESLKKKYQRHLLRMARL GIDIERRHSLKNLLRKIKRQVVSADLQDEKKAAVVDIGQYLDKLAKAPKKIKKASLTPYETAYQRWAESMPRSDIYRMKW AIEKEYPDLRGEAYYKLLLERAGAI
Sequences:
>Translated_345_residues MHRQNSPSIFNDAQFIHTQEKTRRGEANALRKGVSKIHRRYIPAFNDSVPRGAAGQVVARMRNHDWKRNQALCELRKSGY TPFKKRTDPNFVPKPMRITPRSECREALTALSLALAANCNYDPTAEYPFEVMCSIEDLARSMGVLHVYEDGRKAYDILLN ALSVIEQLNYCVVHREIDPDVGQYKPIRMWLTPQFFLSRGFQMDEVRELLNKYRQWAIKNGLSESLKKKYQRHLLRMARL GIDIERRHSLKNLLRKIKRQVVSADLQDEKKAAVVDIGQYLDKLAKAPKKIKKASLTPYETAYQRWAESMPRSDIYRMKW AIEKEYPDLRGEAYYKLLLERAGAI >Mature_345_residues MHRQNSPSIFNDAQFIHTQEKTRRGEANALRKGVSKIHRRYIPAFNDSVPRGAAGQVVARMRNHDWKRNQALCELRKSGY TPFKKRTDPNFVPKPMRITPRSECREALTALSLALAANCNYDPTAEYPFEVMCSIEDLARSMGVLHVYEDGRKAYDILLN ALSVIEQLNYCVVHREIDPDVGQYKPIRMWLTPQFFLSRGFQMDEVRELLNKYRQWAIKNGLSESLKKKYQRHLLRMARL GIDIERRHSLKNLLRKIKRQVVSADLQDEKKAAVVDIGQYLDKLAKAPKKIKKASLTPYETAYQRWAESMPRSDIYRMKW AIEKEYPDLRGEAYYKLLLERAGAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40233; Mature: 40233
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRQNSPSIFNDAQFIHTQEKTRRGEANALRKGVSKIHRRYIPAFNDSVPRGAAGQVVAR CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH MRNHDWKRNQALCELRKSGYTPFKKRTDPNFVPKPMRITPRSECREALTALSLALAANCN HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC YDPTAEYPFEVMCSIEDLARSMGVLHVYEDGRKAYDILLNALSVIEQLNYCVVHREIDPD CCCCCCCCHHHHHHHHHHHHHHCEEEEHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCC VGQYKPIRMWLTPQFFLSRGFQMDEVRELLNKYRQWAIKNGLSESLKKKYQRHLLRMARL CCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIDIERRHSLKNLLRKIKRQVVSADLQDEKKAAVVDIGQYLDKLAKAPKKIKKASLTPYE CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TAYQRWAESMPRSDIYRMKWAIEKEYPDLRGEAYYKLLLERAGAI HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHRQNSPSIFNDAQFIHTQEKTRRGEANALRKGVSKIHRRYIPAFNDSVPRGAAGQVVAR CCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH MRNHDWKRNQALCELRKSGYTPFKKRTDPNFVPKPMRITPRSECREALTALSLALAANCN HHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC YDPTAEYPFEVMCSIEDLARSMGVLHVYEDGRKAYDILLNALSVIEQLNYCVVHREIDPD CCCCCCCCHHHHHHHHHHHHHHCEEEEHHCCHHHHHHHHHHHHHHHHHHHHEEECCCCCC VGQYKPIRMWLTPQFFLSRGFQMDEVRELLNKYRQWAIKNGLSESLKKKYQRHLLRMARL CCCCCCEEEEECHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIDIERRHSLKNLLRKIKRQVVSADLQDEKKAAVVDIGQYLDKLAKAPKKIKKASLTPYE CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH TAYQRWAESMPRSDIYRMKWAIEKEYPDLRGEAYYKLLLERAGAI HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA