| Definition | Anaeromyxobacter sp. Fw109-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009675 |
| Length | 5,277,990 |
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The map label for this gene is 153003045
Identifier: 153003045
GI number: 153003045
Start: 195437
End: 196198
Strand: Reverse
Name: 153003045
Synonym: Anae109_0168
Alternate gene names: NA
Gene position: 196198-195437 (Counterclockwise)
Preceding gene: 153003046
Following gene: 153003039
Centisome position: 3.72
GC content: 79.66
Gene sequence:
>762_bases ATGGGGCGCCTCCCGCCGCCGCTCGCCTACGCCGTCTCCGCCGCGCTCCACCTCGCGGCGCTCGCCGGCCTCGCGCGCCT GCCGCCCCTTCCGGCCCTCGGTGACGAGGTCGCCGTGGAGGTCGTCGACGTCGCGCCGCCCCCGCCCCCACCTCCCGCGC CCGCGCCCGCGCCTGCCCCCACCCCGGCGCCCGAGCCGGAGCCGCTCGGGCCCGCGCCGCGCCGCGCGCCGGTGAAGGCG CCGCCGCTCGCACCGCGGGCCGCGCGCCCCGATCCCGCCCCGCCGCCGCCCAGCGCCGAGCCGCCCGCGGACGCGCCGAG GCGCGCGGCGGTCCGCGTCGGGGTGGCCATGTCGGCCACGACCGAGGGCGGCTCCTTCTCTGCGCCCTCCGGCAACACGC TCCACGGCGAGATGCCGCGCACCGCGCCCGACCCGCAGGACGTGCAGCCGTATCGCTCCGAGCGCTACGCGTCACCCGCT CAGGTGACGGTGCTGCCCCGCCCGATCTCCTGCGAGATCCCGCAGGCCGAGTACCCGGAGGCGGCTCGCCGCGCCGGAGT GGAGGGTCGCGTGGTGCTCACGCTCCTCGTGGACGAGGCCGGGCGCGTCGCGGACGCGAAGGTGGTGGAGTCGCCCGGCC ACGGCCTCGGAGAGGCCGCCGTCGCCGGCGTGAAGCGCCACTGCCGCTTCGACCCCGCGCGCAGGGGCGAGGAGCGCGTC GCGACGAGGCTCCGCTACACGGTGCGCTACGAATTGCCGTGA
Upstream 100 bases:
>100_bases CAAGGGTGCGCTGCACGGGGCGGTGGTGCGCGCCATCGACCTCGTGCGCGACGGCGGGGTGACCCGCTTCGCGATCCACG TCGAGCGGGAGCGGTGACGG
Downstream 100 bases:
>100_bases GCCTAGGGCAACACGGCGGCGCCGATCACGCCCGCATCGTCTCCCAGCCACGCGTGCTCGATGCTGAGCCCCTTCCCCGC GGACTTGGAGACCTTCGCGT
Product: TonB family protein
Products: NA
Alternate protein names: NB-Like Protein; NB-Dependent Receptor
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MGRLPPPLAYAVSAALHLAALAGLARLPPLPALGDEVAVEVVDVAPPPPPPPAPAPAPAPTPAPEPEPLGPAPRRAPVKA PPLAPRAARPDPAPPPPSAEPPADAPRRAAVRVGVAMSATTEGGSFSAPSGNTLHGEMPRTAPDPQDVQPYRSERYASPA QVTVLPRPISCEIPQAEYPEAARRAGVEGRVVLTLLVDEAGRVADAKVVESPGHGLGEAAVAGVKRHCRFDPARRGEERV ATRLRYTVRYELP
Sequences:
>Translated_253_residues MGRLPPPLAYAVSAALHLAALAGLARLPPLPALGDEVAVEVVDVAPPPPPPPAPAPAPAPTPAPEPEPLGPAPRRAPVKA PPLAPRAARPDPAPPPPSAEPPADAPRRAAVRVGVAMSATTEGGSFSAPSGNTLHGEMPRTAPDPQDVQPYRSERYASPA QVTVLPRPISCEIPQAEYPEAARRAGVEGRVVLTLLVDEAGRVADAKVVESPGHGLGEAAVAGVKRHCRFDPARRGEERV ATRLRYTVRYELP >Mature_252_residues GRLPPPLAYAVSAALHLAALAGLARLPPLPALGDEVAVEVVDVAPPPPPPPAPAPAPAPTPAPEPEPLGPAPRRAPVKAP PLAPRAARPDPAPPPPSAEPPADAPRRAAVRVGVAMSATTEGGSFSAPSGNTLHGEMPRTAPDPQDVQPYRSERYASPAQ VTVLPRPISCEIPQAEYPEAARRAGVEGRVVLTLLVDEAGRVADAKVVESPGHGLGEAAVAGVKRHCRFDPARRGEERVA TRLRYTVRYELP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26250; Mature: 26119
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRLPPPLAYAVSAALHLAALAGLARLPPLPALGDEVAVEVVDVAPPPPPPPAPAPAPAP CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC TPAPEPEPLGPAPRRAPVKAPPLAPRAARPDPAPPPPSAEPPADAPRRAAVRVGVAMSAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECEEEEEC TEGGSFSAPSGNTLHGEMPRTAPDPQDVQPYRSERYASPAQVTVLPRPISCEIPQAEYPE CCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCH AARRAGVEGRVVLTLLVDEAGRVADAKVVESPGHGLGEAAVAGVKRHCRFDPARRGEERV HHHHCCCCCEEEEEEEECCCCCCCCHHEECCCCCCHHHHHHHHHHHHHCCCHHHCCHHHH ATRLRYTVRYELP HHHHEEEEEEECC >Mature Secondary Structure GRLPPPLAYAVSAALHLAALAGLARLPPLPALGDEVAVEVVDVAPPPPPPPAPAPAPAP CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC TPAPEPEPLGPAPRRAPVKAPPLAPRAARPDPAPPPPSAEPPADAPRRAAVRVGVAMSAT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECEEEEEC TEGGSFSAPSGNTLHGEMPRTAPDPQDVQPYRSERYASPAQVTVLPRPISCEIPQAEYPE CCCCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCH AARRAGVEGRVVLTLLVDEAGRVADAKVVESPGHGLGEAAVAGVKRHCRFDPARRGEERV HHHHCCCCCEEEEEEEECCCCCCCCHHEECCCCCCHHHHHHHHHHHHHCCCHHHCCHHHH ATRLRYTVRYELP HHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA