| Definition | Anaeromyxobacter sp. Fw109-5 chromosome, complete genome. |
|---|---|
| Accession | NC_009675 |
| Length | 5,277,990 |
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The map label for this gene is iorA [H]
Identifier: 153002922
GI number: 153002922
Start: 56303
End: 57922
Strand: Reverse
Name: iorA [H]
Synonym: Anae109_0043
Alternate gene names: 153002922
Gene position: 57922-56303 (Counterclockwise)
Preceding gene: 153002925
Following gene: 153002921
Centisome position: 1.1
GC content: 74.14
Gene sequence:
>1620_bases ATGGAACGACGGCTTCTTTCCGGTGACGAGGCGGTGGCCGCCGCCGCGATGGACGGCGGCGTGCACCTCGGCACCGGGTA CCCCGGCACGCCCTCGACCGAGATCCTCGAGGCGTTCTCGGCGCTCGGCGGCCGCGCCCAGTGGGCGCCGAACGAGAAGG TCGCGCTCGAGGTCGGCCTCGGCGCGGCCTTCGCCGGCGCGCGCGCCGTCGTCACCATGAAGCACGTCGGCCTGAACGTC GCCGCCGACCCGCTCTTCACCGCCGCGTACACCGGCGTCTCGGGCGCGCTCGTGGTGGTCGCCGCGGACGACCCGGGCAT GGCGTCCTCCCAGAACGAGCAGGACAGCCGCCGCTACGCCATCGCCGCCGGCCTCCCCATGCTCGAGCCCGCCGACTCGC AGGAGGCCTACGAGCTCGCCCTCGCCGCGCTCGAGCTGTCGCAGCGCTGGCAGCTGCCGGTGCTGCTGCGCATGACGACG CGCGTCTGCCACTCGAAGTCGATCGTCACCCGGCAGTCCGCCGTCGCCCCCGCGCCGGTGCCGCGCTTCGCGCGCGACGT CGCCTCGCGCGTGATGATCCCCGCCTACGCCCGCCCCGCCCACCGCCGCCTGCGCAAGAAGCTCGAGAGCCTCGAGGCGT GGGGCGAGACCGCGCCGCTCGCGATCTGGCGCGAGGGGAGCAAGGCGCTCGGGGTGATCGCCAACGGCGTGACGGCCCGG CACGTCCGGGAGGCCGCGCCGGAGGCGAGCCTGCTCGAGCTGAAGCTCGTGCACCCCCTCCCCCTCGAGAAGATCCGCGC CTTCGCCGCCTCGGTGGAGCGCTGCGTGGTGATCGAGGAGGGCGACCCGGTCATCGCCGACGCGGTCCGGGCCGCGGGCA TCCCGGTGGAGGGCAAGGCACCCTCCTTCCGCTTCGGCGAGCTCGACGTCCCGCGCGTGCGGCGGATCCTGGCGCGCGAC CTCTCGCCCGAGCCGGAGGCGCCGAAGGGCAAGCCCCCGCAGCTCTGCGAGGCGTGCCCGTACCACCCGGTCTACTCCAC CCTGAAGAAGCTCGGCTGCATCGTGGCCGGCGACATCGGCTGCTACACGCTCGGCGTGCTGCCGCCGTACGAGGGGATGG ACACCTGCGTGGCGATGGGCGCGTCGCTCGGCGTCGGGCTGGGGCTGCGCCACGTGCTGCCCGAGGAGGACGCCCGCAAG GTGGTGTCCATCATCGGCGACTCGACCTTCGTCCACACCGGGCTGAACGGGCTCGTGGAGATGGTCTACAACCCGCCGCC CACCGGCCACGTGCTCGTGGTGCTCGACAACGGCACCACCGCCATGACCGGGCAGCAGGAGCACCCGGGCACGGGGCGCA CGCTCGATCACGAGCCCACCGCCAAGCTCTCGATCGAGGGGCTCGCGCGCGCCCTCGGGGTCGCGAACGTGGACGTGGTG GACCCCATCGCCGATCCGGCCGGGTTCGAGCGGCTCCTCGCGGGCCGGCTCTCCCGCCCGCAGCTCTCCGTCATCGTCGC GCGCCGCCCCTGCATCCTCGCCGCCGCGGACATCCGCAAGTACGAGAAGGCGGCGGCCGCCGCGGGCTGCGCGGCCTGCC CGGAGGTGGAGAATGTCTGA
Upstream 100 bases:
>100_bases TGCCCGGAATCGCGCACGGGCCGGCCGGCTTTTACCCCGGACGGCGGCGCCCCGCACGTCCCGTGATGTGGCGCGCGCGA TCACGAGGAGAGCGCGAACG
Downstream 100 bases:
>100_bases CGTGGTGAACGTCGTGTTCGCGGGCCTCGGGGGCCAGGGCGTCATCAAGGCGTCGGACATCCTCGCGGACGCCGCCTTCC GGGCCGGGCGAGACGTGAAG
Product: thiamine pyrophosphate binding domain-containing protein
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MERRLLSGDEAVAAAAMDGGVHLGTGYPGTPSTEILEAFSALGGRAQWAPNEKVALEVGLGAAFAGARAVVTMKHVGLNV AADPLFTAAYTGVSGALVVVAADDPGMASSQNEQDSRRYAIAAGLPMLEPADSQEAYELALAALELSQRWQLPVLLRMTT RVCHSKSIVTRQSAVAPAPVPRFARDVASRVMIPAYARPAHRRLRKKLESLEAWGETAPLAIWREGSKALGVIANGVTAR HVREAAPEASLLELKLVHPLPLEKIRAFAASVERCVVIEEGDPVIADAVRAAGIPVEGKAPSFRFGELDVPRVRRILARD LSPEPEAPKGKPPQLCEACPYHPVYSTLKKLGCIVAGDIGCYTLGVLPPYEGMDTCVAMGASLGVGLGLRHVLPEEDARK VVSIIGDSTFVHTGLNGLVEMVYNPPPTGHVLVVLDNGTTAMTGQQEHPGTGRTLDHEPTAKLSIEGLARALGVANVDVV DPIADPAGFERLLAGRLSRPQLSVIVARRPCILAAADIRKYEKAAAAAGCAACPEVENV
Sequences:
>Translated_539_residues MERRLLSGDEAVAAAAMDGGVHLGTGYPGTPSTEILEAFSALGGRAQWAPNEKVALEVGLGAAFAGARAVVTMKHVGLNV AADPLFTAAYTGVSGALVVVAADDPGMASSQNEQDSRRYAIAAGLPMLEPADSQEAYELALAALELSQRWQLPVLLRMTT RVCHSKSIVTRQSAVAPAPVPRFARDVASRVMIPAYARPAHRRLRKKLESLEAWGETAPLAIWREGSKALGVIANGVTAR HVREAAPEASLLELKLVHPLPLEKIRAFAASVERCVVIEEGDPVIADAVRAAGIPVEGKAPSFRFGELDVPRVRRILARD LSPEPEAPKGKPPQLCEACPYHPVYSTLKKLGCIVAGDIGCYTLGVLPPYEGMDTCVAMGASLGVGLGLRHVLPEEDARK VVSIIGDSTFVHTGLNGLVEMVYNPPPTGHVLVVLDNGTTAMTGQQEHPGTGRTLDHEPTAKLSIEGLARALGVANVDVV DPIADPAGFERLLAGRLSRPQLSVIVARRPCILAAADIRKYEKAAAAAGCAACPEVENV >Mature_539_residues MERRLLSGDEAVAAAAMDGGVHLGTGYPGTPSTEILEAFSALGGRAQWAPNEKVALEVGLGAAFAGARAVVTMKHVGLNV AADPLFTAAYTGVSGALVVVAADDPGMASSQNEQDSRRYAIAAGLPMLEPADSQEAYELALAALELSQRWQLPVLLRMTT RVCHSKSIVTRQSAVAPAPVPRFARDVASRVMIPAYARPAHRRLRKKLESLEAWGETAPLAIWREGSKALGVIANGVTAR HVREAAPEASLLELKLVHPLPLEKIRAFAASVERCVVIEEGDPVIADAVRAAGIPVEGKAPSFRFGELDVPRVRRILARD LSPEPEAPKGKPPQLCEACPYHPVYSTLKKLGCIVAGDIGCYTLGVLPPYEGMDTCVAMGASLGVGLGLRHVLPEEDARK VVSIIGDSTFVHTGLNGLVEMVYNPPPTGHVLVVLDNGTTAMTGQQEHPGTGRTLDHEPTAKLSIEGLARALGVANVDVV DPIADPAGFERLLAGRLSRPQLSVIVARRPCILAAADIRKYEKAAAAAGCAACPEVENV
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 56814; Mature: 56814
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRLLSGDEAVAAAAMDGGVHLGTGYPGTPSTEILEAFSALGGRAQWAPNEKVALEVGL CCCCCCCCCHHHEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC GAAFAGARAVVTMKHVGLNVAADPLFTAAYTGVSGALVVVAADDPGMASSQNEQDSRRYA CHHHHCCEEEEEEECCCCCEECCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHEEE IAAGLPMLEPADSQEAYELALAALELSQRWQLPVLLRMTTRVCHSKSIVTRQSAVAPAPV EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC PRFARDVASRVMIPAYARPAHRRLRKKLESLEAWGETAPLAIWREGSKALGVIANGVTAR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHCCCCHHH HVREAAPEASLLELKLVHPLPLEKIRAFAASVERCVVIEEGDPVIADAVRAAGIPVEGKA HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCCCCC PSFRFGELDVPRVRRILARDLSPEPEAPKGKPPQLCEACPYHPVYSTLKKLGCIVAGDIG CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCEEECCCC CYTLGVLPPYEGMDTCVAMGASLGVGLGLRHVLPEEDARKVVSIIGDSTFVHTGLNGLVE EEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCHHHHHCHHHHHH MVYNPPPTGHVLVVLDNGTTAMTGQQEHPGTGRTLDHEPTAKLSIEGLARALGVANVDVV HHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCC DPIADPAGFERLLAGRLSRPQLSVIVARRPCILAAADIRKYEKAAAAAGCAACPEVENV CCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MERRLLSGDEAVAAAAMDGGVHLGTGYPGTPSTEILEAFSALGGRAQWAPNEKVALEVGL CCCCCCCCCHHHEEEECCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC GAAFAGARAVVTMKHVGLNVAADPLFTAAYTGVSGALVVVAADDPGMASSQNEQDSRRYA CHHHHCCEEEEEEECCCCCEECCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHEEE IAAGLPMLEPADSQEAYELALAALELSQRWQLPVLLRMTTRVCHSKSIVTRQSAVAPAPV EEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC PRFARDVASRVMIPAYARPAHRRLRKKLESLEAWGETAPLAIWREGSKALGVIANGVTAR HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEHHCCCCHHH HVREAAPEASLLELKLVHPLPLEKIRAFAASVERCVVIEEGDPVIADAVRAAGIPVEGKA HHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHCCCCCCCCC PSFRFGELDVPRVRRILARDLSPEPEAPKGKPPQLCEACPYHPVYSTLKKLGCIVAGDIG CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCCEEECCCC CYTLGVLPPYEGMDTCVAMGASLGVGLGLRHVLPEEDARKVVSIIGDSTFVHTGLNGLVE EEEEECCCCCCCHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCHHHHHCHHHHHH MVYNPPPTGHVLVVLDNGTTAMTGQQEHPGTGRTLDHEPTAKLSIEGLARALGVANVDVV HHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCC DPIADPAGFERLLAGRLSRPQLSVIVARRPCILAAADIRKYEKAAAAAGCAACPEVENV CCCCCCHHHHHHHHHCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]