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The map label for this gene is yybT [H]

Identifier: 152977669

GI number: 152977669

Start: 4069928

End: 4071901

Strand: Reverse

Name: yybT [H]

Synonym: Bcer98_4010

Alternate gene names: 152977669

Gene position: 4071901-4069928 (Counterclockwise)

Preceding gene: 152977670

Following gene: 152977668

Centisome position: 99.63

GC content: 38.15

Gene sequence:

>1974_bases
ATGCCTGAATTTTATAAAAGACAGCGGTTTTTATATCCTGTTTATGTGTTGGCCTTTTTTATGTTTGTACTTATAGCCAT
TCTTAGTTTCTTTCATTGGTTTATGGGAATGGTGGCCTTTTTTATTTTTTGTATTGTGCTTTTTTTTGCCATACGTTTTG
AGTTAACTTTTCAAAAAAAGCTTGAAAAGTATACGACTGATATGATTACGAGGGTAAAGAAAGTAAGTAATGAAGCCTTT
AATCAAATGCCGATTGGTATCTTACTATACAATAAGGAGTATGGAATTGATTGGGCAAACCCTTACTTATCTTCCTGCTT
GGGGCAACATTCTTTGGCGGGTTGGCATCTATATGATGTATCAGAAACATTACTTCTTTTTATAAAAGGGGAAAGTTCTG
ATGATATTGTATCTTTAAATAATCGTAAGTTTCGTGTGTTCGTTAGAAAAGAAGAGAAATTAATCTATTTCTTTGATGTA
ACGGAGCAAACAGAGATTGAAAAAATGTATGAGGATCAACGCACAGTTTTAGCGATTATTTACTTGGATAACTACGATGA
AGTTACCCAAGGATTAGATGATCAATTGCGCACGAATATAACGAGTCTTGTAACATCGCGCTTAAATGAATGGGCACTGA
AATATGGAGCGTATTTAAAACGAGCTTCTTCAGAGCGGTTCTTCGTTGTATTAAATGAAAGCATTTTAATGCAAATGGAG
AAAGGGAAATTTGATATTTTAGATCAAGTGCGTGAAGAAACATCGAAAAGGAATATTCCGCTTACATTAAGTATTGGTGT
CGGATCAGGTGACTTGTCTTTATCTGAGCTTGGAGCAATGGCACAATCTGGTTTAGACCTTGCATTGGGACGAGGGGGAG
ATCAGGTAGCAATTAAGCAAGCGACAGGTAAGGTGAAGTTTTATGGGGGTAAGACAAATCCTGTTGAAAAGCGGACACGT
GTAAGAGCAAGAGTGATTTCTCATGCGTTAAAAGATTTAGTAATTGAAAGTAGCAACGTGATGATAATGGGGCATAGAGC
ACCGGATATGGATGCAATTGGTGCCGCTATTGGTATTTTAAAAGTAGCTCAATTAAACGAGCGTGAAGGGTATATCGTGT
TAGATGAGAATGACTCGGATAAAGGGATAAAACGTTTAATGGAGAAAGTAAAGCAAAATAAGGACTTATGGTCTCGTTTT
ATTACACCCCAGCAGGCTATGGAATTTGCGACAGATGATTCATTACTCGTTGTTGTGGATACGCATAAACCTTCCATGGT
GATGGAGGAGAAGCTACTACACAAAATTGAGAATGTAGTTGTAATCGACCACCATCGACGTGGTGAGGAATTTATTGAAG
ATCCATTGCTTGTCTATATGGAGCCATATGCTTCGTCTACAGCGGAGCTCGTAACGGAATTACTTGAATACCAGCCGAAA
CGTTTAAAGATGACGATGCTAGAAGCGACGGCATTACTTGCGGGGATTATTGTAGATACGAAAAGTTTTACATTCCGTAC
AGGCGCTCGTACGTTTGATGCCGCCTCTTATTTACGGTCGCACGGGGCGGATACAGTTCTTGTACAAGAATTGTTAAAAG
AAGATATGCAGCAGTATTTACGAGTTGCAAAAACAATTCAAAATGCGTACATTTATAAAAATGGAATTGCGATTGCCAAG
GTAGATAGTGATGAATATTGTGACCAAGTATTGATTGCGCAATCTGCTGATACATTACTGACAATGACAGGGATCATTGC
CTCTTTTGTTATTGCAAAACGCGGGGAAAACTTCATCGGAATTAGTGGACGTTCTTTAGGCGAAGTGAATGTACAACTCA
TTATGGAAAACCTAGGTGGCGGTGGTCATTTAACAAATGCTGCTACACAGATAAAAAATACAACAATCGATGAAGCGGAA
GAGAAGCTTCAATTGGTTATTGAGGATTATTTAAAGGGAGGCACACAATCATGA

Upstream 100 bases:

>100_bases
ATGGGAATCTGTAATGAACGTTGCTTAGGCTGACGTTTAATTTGTTCAACTAACGTGTGAGTATCATCTATGTTAGTTTT
ACTTTATAGGAGTTGGATTC

Downstream 100 bases:

>100_bases
AGGTAATTTTTCTAAAAGATGTAAAAGGTAAAGGAAAAAAAGGGGAAATCAAAAACGTACCAGATGGTTATGCGAATAAC
TTTTTATTAAAGCAAGGATT

Product: diguanylate cyclase and phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 657; Mature: 656

Protein sequence:

>657_residues
MPEFYKRQRFLYPVYVLAFFMFVLIAILSFFHWFMGMVAFFIFCIVLFFAIRFELTFQKKLEKYTTDMITRVKKVSNEAF
NQMPIGILLYNKEYGIDWANPYLSSCLGQHSLAGWHLYDVSETLLLFIKGESSDDIVSLNNRKFRVFVRKEEKLIYFFDV
TEQTEIEKMYEDQRTVLAIIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWALKYGAYLKRASSERFFVVLNESILMQME
KGKFDILDQVREETSKRNIPLTLSIGVGSGDLSLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKFYGGKTNPVEKRTR
VRARVISHALKDLVIESSNVMIMGHRAPDMDAIGAAIGILKVAQLNEREGYIVLDENDSDKGIKRLMEKVKQNKDLWSRF
ITPQQAMEFATDDSLLVVVDTHKPSMVMEEKLLHKIENVVVIDHHRRGEEFIEDPLLVYMEPYASSTAELVTELLEYQPK
RLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMQQYLRVAKTIQNAYIYKNGIAIAK
VDSDEYCDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNAATQIKNTTIDEAE
EKLQLVIEDYLKGGTQS

Sequences:

>Translated_657_residues
MPEFYKRQRFLYPVYVLAFFMFVLIAILSFFHWFMGMVAFFIFCIVLFFAIRFELTFQKKLEKYTTDMITRVKKVSNEAF
NQMPIGILLYNKEYGIDWANPYLSSCLGQHSLAGWHLYDVSETLLLFIKGESSDDIVSLNNRKFRVFVRKEEKLIYFFDV
TEQTEIEKMYEDQRTVLAIIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWALKYGAYLKRASSERFFVVLNESILMQME
KGKFDILDQVREETSKRNIPLTLSIGVGSGDLSLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKFYGGKTNPVEKRTR
VRARVISHALKDLVIESSNVMIMGHRAPDMDAIGAAIGILKVAQLNEREGYIVLDENDSDKGIKRLMEKVKQNKDLWSRF
ITPQQAMEFATDDSLLVVVDTHKPSMVMEEKLLHKIENVVVIDHHRRGEEFIEDPLLVYMEPYASSTAELVTELLEYQPK
RLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMQQYLRVAKTIQNAYIYKNGIAIAK
VDSDEYCDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNAATQIKNTTIDEAE
EKLQLVIEDYLKGGTQS
>Mature_656_residues
PEFYKRQRFLYPVYVLAFFMFVLIAILSFFHWFMGMVAFFIFCIVLFFAIRFELTFQKKLEKYTTDMITRVKKVSNEAFN
QMPIGILLYNKEYGIDWANPYLSSCLGQHSLAGWHLYDVSETLLLFIKGESSDDIVSLNNRKFRVFVRKEEKLIYFFDVT
EQTEIEKMYEDQRTVLAIIYLDNYDEVTQGLDDQLRTNITSLVTSRLNEWALKYGAYLKRASSERFFVVLNESILMQMEK
GKFDILDQVREETSKRNIPLTLSIGVGSGDLSLSELGAMAQSGLDLALGRGGDQVAIKQATGKVKFYGGKTNPVEKRTRV
RARVISHALKDLVIESSNVMIMGHRAPDMDAIGAAIGILKVAQLNEREGYIVLDENDSDKGIKRLMEKVKQNKDLWSRFI
TPQQAMEFATDDSLLVVVDTHKPSMVMEEKLLHKIENVVVIDHHRRGEEFIEDPLLVYMEPYASSTAELVTELLEYQPKR
LKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMQQYLRVAKTIQNAYIYKNGIAIAKV
DSDEYCDQVLIAQSADTLLTMTGIIASFVIAKRGENFIGISGRSLGEVNVQLIMENLGGGGHLTNAATQIKNTTIDEAEE
KLQLVIEDYLKGGTQS

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 74562; Mature: 74431

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEFYKRQRFLYPVYVLAFFMFVLIAILSFFHWFMGMVAFFIFCIVLFFAIRFELTFQKK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKYTTDMITRVKKVSNEAFNQMPIGILLYNKEYGIDWANPYLSSCLGQHSLAGWHLYDV
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEC
SETLLLFIKGESSDDIVSLNNRKFRVFVRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAII
CCEEEEEEECCCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEE
YLDNYDEVTQGLDDQLRTNITSLVTSRLNEWALKYGAYLKRASSERFFVVLNESILMQME
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
KGKFDILDQVREETSKRNIPLTLSIGVGSGDLSLSELGAMAQSGLDLALGRGGDQVAIKQ
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEE
ATGKVKFYGGKTNPVEKRTRVRARVISHALKDLVIESSNVMIMGHRAPDMDAIGAAIGIL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
KVAQLNEREGYIVLDENDSDKGIKRLMEKVKQNKDLWSRFITPQQAMEFATDDSLLVVVD
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCEEEEEE
THKPSMVMEEKLLHKIENVVVIDHHRRGEEFIEDPLLVYMEPYASSTAELVTELLEYQPK
CCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCH
RLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMQQYL
HHHHHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RVAKTIQNAYIYKNGIAIAKVDSDEYCDQVLIAQSADTLLTMTGIIASFVIAKRGENFIG
HHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE
ISGRSLGEVNVQLIMENLGGGGHLTNAATQIKNTTIDEAEEKLQLVIEDYLKGGTQS
ECCCCCCHHHHHHHEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PEFYKRQRFLYPVYVLAFFMFVLIAILSFFHWFMGMVAFFIFCIVLFFAIRFELTFQKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LEKYTTDMITRVKKVSNEAFNQMPIGILLYNKEYGIDWANPYLSSCLGQHSLAGWHLYDV
HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCEEEEEC
SETLLLFIKGESSDDIVSLNNRKFRVFVRKEEKLIYFFDVTEQTEIEKMYEDQRTVLAII
CCEEEEEEECCCCCCEEEECCCEEEEEEEECCCEEEEEECCCHHHHHHHHCCCCEEEEEE
YLDNYDEVTQGLDDQLRTNITSLVTSRLNEWALKYGAYLKRASSERFFVVLNESILMQME
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
KGKFDILDQVREETSKRNIPLTLSIGVGSGDLSLSELGAMAQSGLDLALGRGGDQVAIKQ
CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEE
ATGKVKFYGGKTNPVEKRTRVRARVISHALKDLVIESSNVMIMGHRAPDMDAIGAAIGIL
CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHH
KVAQLNEREGYIVLDENDSDKGIKRLMEKVKQNKDLWSRFITPQQAMEFATDDSLLVVVD
HHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCHHHHHHHCCHHHHHHHCCCCCEEEEEE
THKPSMVMEEKLLHKIENVVVIDHHRRGEEFIEDPLLVYMEPYASSTAELVTELLEYQPK
CCCCCHHHHHHHHHHHCCEEEEECCCCCHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCH
RLKMTMLEATALLAGIIVDTKSFTFRTGARTFDAASYLRSHGADTVLVQELLKEDMQQYL
HHHHHHHHHHHHHHHHHEECCCEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
RVAKTIQNAYIYKNGIAIAKVDSDEYCDQVLIAQSADTLLTMTGIIASFVIAKRGENFIG
HHHHHHHHHHEEECCEEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEE
ISGRSLGEVNVQLIMENLGGGGHLTNAATQIKNTTIDEAEEKLQLVIEDYLKGGTQS
ECCCCCCHHHHHHHEECCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]