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The map label for this gene is yuxN [H]

Identifier: 152977614

GI number: 152977614

Start: 4009288

End: 4010163

Strand: Reverse

Name: yuxN [H]

Synonym: Bcer98_3952

Alternate gene names: 152977614

Gene position: 4010163-4009288 (Counterclockwise)

Preceding gene: 152977616

Following gene: 152977608

Centisome position: 98.12

GC content: 30.02

Gene sequence:

>876_bases
ATGAAAGAAAAAGAACGCTTAATTATTGAAATGGCAATGAAGTTATTTGCAGCGAAAGGTGTTAACGCAACATCCGTACA
AGAAATCGTGACAGCGTGCGGGATATCAAAAGGAGCTTTTTATTTATATTTCAAATCAAAAGACGAATTGCTTCTAGCTA
CTCTTAAATATTATTATGAAAAAATTCAAAGTAAAATGATGAAAATTGACAAAGAATCATTACTACCACGCGAAAAATTT
GTCAAACAATTATATTGTCAGTTTCATGATATACAAACGCATAAGGAATTTATTATTATGCATGCAAGGGAGAATGCAAT
TCCATTTAATAAAGAAGTAGAAGCATTTATGATGAACATGAAAATGGAGTCACATGCATTTTATCGAAATAGTATATTGT
CTATTTATGGTGAAAAGGTCACTCCGTATTTGTTAGATCTTGTAGTGATAGTAGAAGGGATTTCCCGAGCGTATTTAGAA
TTAATCATTTTAAATGAAACAGAAATTAATTTAAATCATGTTTCCACATTTATTTTAAAAAGAATGGATGACATTGTAGA
AGGTCTTGTAAATTCTGGTGAGGAACCTGTTTTGCATGAAGAACAATTAGGACAACTTCTTTGCAGTTCAGACTTAATAA
AAGAGCAAGTGAAGGAACAATTTCTACAGGAAATTATTATGTTTAAACGTAATTTAGCTGATGAATTAGAAAATGATGAG
TTATTAGTTACATTGGATGTTTTAGAAGCAGAAATGAGAGTAGCAAATCCAAGAATACCAGTGATTCAAGGAATGTTAGC
AAATTTAAAGCGTTACGATAATTTAATGGATTTTCGACTTCGATTAGCGAAATATTATGAGATAGATATAATTTAA

Upstream 100 bases:

>100_bases
AGTCGTCAATAAAAAGAAATGTTATAATACTGTTAAGATAAAGTGGAAATAACAACTATAATGTAAAATTATGATGTAAA
GTTCTATTAGGAGAGAAAAT

Downstream 100 bases:

>100_bases
AATCAATAGAGGTGAATCATAACAGATCCACCTCTATTGATTATTTGTCAGATTGTGCCCATTCTTCTACATTCCAAACT
TTTGTTACCCAATCTTGGTA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKEKERLIIEMAMKLFAAKGVNATSVQEIVTACGISKGAFYLYFKSKDELLLATLKYYYEKIQSKMMKIDKESLLPREKF
VKQLYCQFHDIQTHKEFIIMHARENAIPFNKEVEAFMMNMKMESHAFYRNSILSIYGEKVTPYLLDLVVIVEGISRAYLE
LIILNETEINLNHVSTFILKRMDDIVEGLVNSGEEPVLHEEQLGQLLCSSDLIKEQVKEQFLQEIIMFKRNLADELENDE
LLVTLDVLEAEMRVANPRIPVIQGMLANLKRYDNLMDFRLRLAKYYEIDII

Sequences:

>Translated_291_residues
MKEKERLIIEMAMKLFAAKGVNATSVQEIVTACGISKGAFYLYFKSKDELLLATLKYYYEKIQSKMMKIDKESLLPREKF
VKQLYCQFHDIQTHKEFIIMHARENAIPFNKEVEAFMMNMKMESHAFYRNSILSIYGEKVTPYLLDLVVIVEGISRAYLE
LIILNETEINLNHVSTFILKRMDDIVEGLVNSGEEPVLHEEQLGQLLCSSDLIKEQVKEQFLQEIIMFKRNLADELENDE
LLVTLDVLEAEMRVANPRIPVIQGMLANLKRYDNLMDFRLRLAKYYEIDII
>Mature_291_residues
MKEKERLIIEMAMKLFAAKGVNATSVQEIVTACGISKGAFYLYFKSKDELLLATLKYYYEKIQSKMMKIDKESLLPREKF
VKQLYCQFHDIQTHKEFIIMHARENAIPFNKEVEAFMMNMKMESHAFYRNSILSIYGEKVTPYLLDLVVIVEGISRAYLE
LIILNETEINLNHVSTFILKRMDDIVEGLVNSGEEPVLHEEQLGQLLCSSDLIKEQVKEQFLQEIIMFKRNLADELENDE
LLVTLDVLEAEMRVANPRIPVIQGMLANLKRYDNLMDFRLRLAKYYEIDII

Specific function: Potential Regulator Protein For The Acrab Genes. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 34010; Mature: 34010

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKERLIIEMAMKLFAAKGVNATSVQEIVTACGISKGAFYLYFKSKDELLLATLKYYYE
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
KIQSKMMKIDKESLLPREKFVKQLYCQFHDIQTHKEFIIMHARENAIPFNKEVEAFMMNM
HHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCHHHHHHHHHH
KMESHAFYRNSILSIYGEKVTPYLLDLVVIVEGISRAYLELIILNETEINLNHVSTFILK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHH
RMDDIVEGLVNSGEEPVLHEEQLGQLLCSSDLIKEQVKEQFLQEIIMFKRNLADELENDE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LLVTLDVLEAEMRVANPRIPVIQGMLANLKRYDNLMDFRLRLAKYYEIDII
EEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MKEKERLIIEMAMKLFAAKGVNATSVQEIVTACGISKGAFYLYFKSKDELLLATLKYYYE
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
KIQSKMMKIDKESLLPREKFVKQLYCQFHDIQTHKEFIIMHARENAIPFNKEVEAFMMNM
HHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCCCHHHHHHHHHH
KMESHAFYRNSILSIYGEKVTPYLLDLVVIVEGISRAYLELIILNETEINLNHVSTFILK
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHH
RMDDIVEGLVNSGEEPVLHEEQLGQLLCSSDLIKEQVKEQFLQEIIMFKRNLADELENDE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LLVTLDVLEAEMRVANPRIPVIQGMLANLKRYDNLMDFRLRLAKYYEIDII
EEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9353931; 9384377; 3923430 [H]