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The map label for this gene is yfiY [H]

Identifier: 152977563

GI number: 152977563

Start: 3956294

End: 3957235

Strand: Reverse

Name: yfiY [H]

Synonym: Bcer98_3901

Alternate gene names: 152977563

Gene position: 3957235-3956294 (Counterclockwise)

Preceding gene: 152977564

Following gene: 152977562

Centisome position: 96.82

GC content: 34.5

Gene sequence:

>942_bases
ATGAAGAGATTCAAACTAACATTATTAGCAATGGTACTTGTTGTTACTTCTGTATTATTTGCAGCTTGTTCTTCTGATAA
GAAGGAAGAAAAGAAAGCTGACGCAAATGCGAAAGAGCGCACTGTACAGCATGCAAAAGGGGAAATAAAAATTCCTGCAA
AACCAAAGAAAATTGCTGACCTTAGTGGTTCGACGGAAGAATTATTAATCTTTGGAATGAAACCAATTATTACTGCAAAT
ACGTCTCAAGAAAAAATTGATGCTCATATTGCAGATAAATTAAAAGGTGTAAAACCAGTTGGCTCTGCTTGGGGCGACAA
AATCAACATTGAGGCAGTAGCTGCTGCAAAACCAGATTTAATTCTTGTGAATAATCGTCAAGAAAAAATCTATGATCAAC
TATCTAAAATTGCACCAACTGTTATGTTAAAAACTCCATTAGATCAATGGCGTCCGAAGTTTAAAGAATTAGGTAAAATC
TTTGATAAAGAAAAAGAAACAAAAGAATGGTTTAAAAAGTATGATGATAAAGCAAGCAAATTACATGATAAAATCGTTGC
GAAAACTGGCGATGCGAAGTTCATGAAAATGGCTGCATATCCAAATGCATTCCGTGTATATGGTGATTACGGTTACGGTA
GCGTAATCTTTACAGATTTAAAATTACCGGCAGTTGCAGGGACACCAATGGATAAACCGTTAGTACAAGTACAAAAAGAA
GCATTAATCGACTACAATCCAGATTACTTATTCGTATTTACAACAGGTGACGGTTCTCAGCGCTTAAAAGAATTCCAAGA
AGAAACAATTTGGAAAAATATGAACGCTGTTAAGAACAACCACGTATTTACAATTAAAAATGATGCAGTAAACAAAGGAT
ACTTCCCACTTGGTAAAGAAATGATTTTAGACGAAGTTGCGAACTTTGTTTTAGGGAAATAA

Upstream 100 bases:

>100_bases
ACGAAACTTATAATAGGGATATATTGATAAATTGCTTTTATTGTTTCGTATAGTGATATACAGCTTATAAAGAAAATGAT
ATCCAGGAGGAGAAAAGAAT

Downstream 100 bases:

>100_bases
TAAAAAAGAAATCACTTTCGGAATCGTGAAAGTGATTTCTTTTTTATATAACAGTATTTTTATACAGTCTTTCATTTCTT
TCTCTTTCCTATTTCGTTTA

Product: periplasmic binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MKRFKLTLLAMVLVVTSVLFAACSSDKKEEKKADANAKERTVQHAKGEIKIPAKPKKIADLSGSTEELLIFGMKPIITAN
TSQEKIDAHIADKLKGVKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFKELGKI
FDKEKETKEWFKKYDDKASKLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFTDLKLPAVAGTPMDKPLVQVQKE
ALIDYNPDYLFVFTTGDGSQRLKEFQEETIWKNMNAVKNNHVFTIKNDAVNKGYFPLGKEMILDEVANFVLGK

Sequences:

>Translated_313_residues
MKRFKLTLLAMVLVVTSVLFAACSSDKKEEKKADANAKERTVQHAKGEIKIPAKPKKIADLSGSTEELLIFGMKPIITAN
TSQEKIDAHIADKLKGVKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFKELGKI
FDKEKETKEWFKKYDDKASKLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFTDLKLPAVAGTPMDKPLVQVQKE
ALIDYNPDYLFVFTTGDGSQRLKEFQEETIWKNMNAVKNNHVFTIKNDAVNKGYFPLGKEMILDEVANFVLGK
>Mature_313_residues
MKRFKLTLLAMVLVVTSVLFAACSSDKKEEKKADANAKERTVQHAKGEIKIPAKPKKIADLSGSTEELLIFGMKPIITAN
TSQEKIDAHIADKLKGVKPVGSAWGDKINIEAVAAAKPDLILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFKELGKI
FDKEKETKEWFKKYDDKASKLHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFTDLKLPAVAGTPMDKPLVQVQKE
ALIDYNPDYLFVFTTGDGSQRLKEFQEETIWKNMNAVKNNHVFTIKNDAVNKGYFPLGKEMILDEVANFVLGK

Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen. Binds the siderophores and delivers them to the surface of yfiZ/yfhA (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable). Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 35151; Mature: 35151

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRFKLTLLAMVLVVTSVLFAACSSDKKEEKKADANAKERTVQHAKGEIKIPAKPKKIAD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCEECCCCCCHHHC
LSGSTEELLIFGMKPIITANTSQEKIDAHIADKLKGVKPVGSAWGDKINIEAVAAAKPDL
CCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCE
ILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFKELGKIFDKEKETKEWFKKYDDKASK
EEECCCHHHHHHHHHHHCCCEEEECCHHHHCHHHHHHHHHHCCCHHHHHHHHHHCHHHHH
LHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFTDLKLPAVAGTPMDKPLVQVQKE
HHHHHHHCCCCHHHEEECCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCHHHHHHHH
ALIDYNPDYLFVFTTGDGSQRLKEFQEETIWKNMNAVKNNHVFTIKNDAVNKGYFPLGKE
HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHH
MILDEVANFVLGK
HHHHHHHHHHCCC
>Mature Secondary Structure
MKRFKLTLLAMVLVVTSVLFAACSSDKKEEKKADANAKERTVQHAKGEIKIPAKPKKIAD
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCEECCCCCCHHHC
LSGSTEELLIFGMKPIITANTSQEKIDAHIADKLKGVKPVGSAWGDKINIEAVAAAKPDL
CCCCCCCEEEECCCCEEECCCCHHHHHHHHHHHHCCCCCCHHHCCCCEEEEEEECCCCCE
ILVNNRQEKIYDQLSKIAPTVMLKTPLDQWRPKFKELGKIFDKEKETKEWFKKYDDKASK
EEECCCHHHHHHHHHHHCCCEEEECCHHHHCHHHHHHHHHHCCCHHHHHHHHHHCHHHHH
LHDKIVAKTGDAKFMKMAAYPNAFRVYGDYGYGSVIFTDLKLPAVAGTPMDKPLVQVQKE
HHHHHHHCCCCHHHEEECCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCHHHHHHHH
ALIDYNPDYLFVFTTGDGSQRLKEFQEETIWKNMNAVKNNHVFTIKNDAVNKGYFPLGKE
HHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHH
MILDEVANFVLGK
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]