Click here to switch to the map view.

The map label for this gene is yknX [H]

Identifier: 152977455

GI number: 152977455

Start: 3847553

End: 3848740

Strand: Reverse

Name: yknX [H]

Synonym: Bcer98_3787

Alternate gene names: 152977455

Gene position: 3848740-3847553 (Counterclockwise)

Preceding gene: 152977456

Following gene: 152977454

Centisome position: 94.17

GC content: 37.63

Gene sequence:

>1188_bases
ATGTTACCAAACACGGTTCGTACTCCAAACAAAAAAAAGAAATGGATGATCATTGGGATTATTACATTAATTGTTGTCGT
TGCAGCGATTAACATTTTCGTCATGCAAAATAAGAAGGGCGAGGCGAAGGCGGATGCTATTAGTTTCGAAAAAGTAACAG
AGCGTAAGCTAAATAATACGAAATTAATTGCAGGACAAGTAAAGCCAGGAAATATCGAAAGTTTCTATGCAGATCCAACA
AAAGGGAAAGTGAAAGATATTGCCGTAAAAGAAGGGCAAGAAGTTGAAAAGGGAACGAAGTTATTCTCTTATGATAATGA
AGAAATCAATTTGCAAATACAACAAGCCGAGCTTGAGCAAAAAATGGCAACGATGCGTTATGATCAGACGCAGAAGAAAA
TAGATTCATTGAAGAAAGAGGTTAAGAAAGCGAAAGACAGCGGCGCTGGAAAAGAAGTGACAGAGCCGATGGAAGAGCAA
GTAAGTGAATTAGAATTACAGCAAAAAACAGCGGATCTTGAAAAAGAAAAAGGTAAGTTGCAGGTAGAAGAATTACAGAA
AAAACAGAAAGAACTTACGATTTATAGCAACTTTGCAGGTGTTGTACAAAAGCTAGATAAAGATGCAGCGCAAAGTTCCT
CACAAGCGATGGGTGGACAAGGAAAAGCATTTTTACAAATCGCTTCTAAAGAGCCATTCCAAATTCAAGGGACATTAACG
GAGCTTCAAAAATCACAAATTCAAAAAGATCAAACATTTACTGTAACAGCGAAAGCAAACAGTAAGAAAAAATGGACAGG
TAAGATTATAGAGGTAAGTGAGTTCCCAACAAGTGCAGAGATGGCACAAGCGGCAGGAGCAGGTGAAGCGACGCAAAATA
TGTCTCAATATACATATAAAGCAAGCCTTGATAGTCAAGATGGTTTATCTCCAGGTTATCATGTGTCACTTCAAGTCAAT
TTAGAAAATAAGAAAATGATTGCTGTTCCAAGCAAGAGCATTGTTGAAAAAGGTGACGATGCATTTGTATATGTAGAAGA
AAAAGGAAAGCTTCGTAAGCAAAATGTGAAGAAAGGGTCTACTGATGGAGATTGGACAGAAGTTCTTGAAGGTGTAACAG
TGGGACAAAAGGTGGTTAAAAATCCTTCCGACAAAGTGTATGACGGAATGGAAGTGAAAGAAAAATGA

Upstream 100 bases:

>100_bases
TTGTAAAAAAGGCGTAATGGTAGAAAAGGTTTCGTTATGTTTTTCTGAAAGTTTTGTATTATGTTGTTATTATCATATCA
ATATAAAAAGGAGAGAGAAT

Downstream 100 bases:

>100_bases
TTACACTAAATAATATTCAAAAAACGTATTATCAAGGAAAATTGGCAGTACCCATTCTACACGGCATTAGTTTAACGATT
CAAAATGGTGAATTTGTATC

Product: RND family efflux transporter MFP subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MLPNTVRTPNKKKKWMIIGIITLIVVVAAINIFVMQNKKGEAKADAISFEKVTERKLNNTKLIAGQVKPGNIESFYADPT
KGKVKDIAVKEGQEVEKGTKLFSYDNEEINLQIQQAELEQKMATMRYDQTQKKIDSLKKEVKKAKDSGAGKEVTEPMEEQ
VSELELQQKTADLEKEKGKLQVEELQKKQKELTIYSNFAGVVQKLDKDAAQSSSQAMGGQGKAFLQIASKEPFQIQGTLT
ELQKSQIQKDQTFTVTAKANSKKKWTGKIIEVSEFPTSAEMAQAAGAGEATQNMSQYTYKASLDSQDGLSPGYHVSLQVN
LENKKMIAVPSKSIVEKGDDAFVYVEEKGKLRKQNVKKGSTDGDWTEVLEGVTVGQKVVKNPSDKVYDGMEVKEK

Sequences:

>Translated_395_residues
MLPNTVRTPNKKKKWMIIGIITLIVVVAAINIFVMQNKKGEAKADAISFEKVTERKLNNTKLIAGQVKPGNIESFYADPT
KGKVKDIAVKEGQEVEKGTKLFSYDNEEINLQIQQAELEQKMATMRYDQTQKKIDSLKKEVKKAKDSGAGKEVTEPMEEQ
VSELELQQKTADLEKEKGKLQVEELQKKQKELTIYSNFAGVVQKLDKDAAQSSSQAMGGQGKAFLQIASKEPFQIQGTLT
ELQKSQIQKDQTFTVTAKANSKKKWTGKIIEVSEFPTSAEMAQAAGAGEATQNMSQYTYKASLDSQDGLSPGYHVSLQVN
LENKKMIAVPSKSIVEKGDDAFVYVEEKGKLRKQNVKKGSTDGDWTEVLEGVTVGQKVVKNPSDKVYDGMEVKEK
>Mature_395_residues
MLPNTVRTPNKKKKWMIIGIITLIVVVAAINIFVMQNKKGEAKADAISFEKVTERKLNNTKLIAGQVKPGNIESFYADPT
KGKVKDIAVKEGQEVEKGTKLFSYDNEEINLQIQQAELEQKMATMRYDQTQKKIDSLKKEVKKAKDSGAGKEVTEPMEEQ
VSELELQQKTADLEKEKGKLQVEELQKKQKELTIYSNFAGVVQKLDKDAAQSSSQAMGGQGKAFLQIASKEPFQIQGTLT
ELQKSQIQKDQTFTVTAKANSKKKWTGKIIEVSEFPTSAEMAQAAGAGEATQNMSQYTYKASLDSQDGLSPGYHVSLQVN
LENKKMIAVPSKSIVEKGDDAFVYVEEKGKLRKQNVKKGSTDGDWTEVLEGVTVGQKVVKNPSDKVYDGMEVKEK

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43841; Mature: 43841

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPNTVRTPNKKKKWMIIGIITLIVVVAAINIFVMQNKKGEAKADAISFEKVTERKLNNT
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCC
KLIAGQVKPGNIESFYADPTKGKVKDIAVKEGQEVEKGTKLFSYDNEEINLQIQQAELEQ
EEEEECCCCCCCCCEECCCCCCCEEEEHHCCCCHHHHCCEEEECCCCEEEEEEEHHHHHH
KMATMRYDQTQKKIDSLKKEVKKAKDSGAGKEVTEPMEEQVSELELQQKTADLEKEKGKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
QVEELQKKQKELTIYSNFAGVVQKLDKDAAQSSSQAMGGQGKAFLQIASKEPFQIQGTLT
EHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHH
ELQKSQIQKDQTFTVTAKANSKKKWTGKIIEVSEFPTSAEMAQAAGAGEATQNMSQYTYK
HHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHEEE
ASLDSQDGLSPGYHVSLQVNLENKKMIAVPSKSIVEKGDDAFVYVEEKGKLRKQNVKKGS
ECCCCCCCCCCCEEEEEEEEECCCEEEECCCHHHHHCCCCEEEEECCCCCHHHHHCCCCC
TDGDWTEVLEGVTVGQKVVKNPSDKVYDGMEVKEK
CCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC
>Mature Secondary Structure
MLPNTVRTPNKKKKWMIIGIITLIVVVAAINIFVMQNKKGEAKADAISFEKVTERKLNNT
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCC
KLIAGQVKPGNIESFYADPTKGKVKDIAVKEGQEVEKGTKLFSYDNEEINLQIQQAELEQ
EEEEECCCCCCCCCEECCCCCCCEEEEHHCCCCHHHHCCEEEECCCCEEEEEEEHHHHHH
KMATMRYDQTQKKIDSLKKEVKKAKDSGAGKEVTEPMEEQVSELELQQKTADLEKEKGKL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
QVEELQKKQKELTIYSNFAGVVQKLDKDAAQSSSQAMGGQGKAFLQIASKEPFQIQGTLT
EHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEHHHH
ELQKSQIQKDQTFTVTAKANSKKKWTGKIIEVSEFPTSAEMAQAAGAGEATQNMSQYTYK
HHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHCCCCHHHHHHHHHEEE
ASLDSQDGLSPGYHVSLQVNLENKKMIAVPSKSIVEKGDDAFVYVEEKGKLRKQNVKKGS
ECCCCCCCCCCCEEEEEEEEECCCEEEECCCHHHHHCCCCEEEEECCCCCHHHHHCCCCC
TDGDWTEVLEGVTVGQKVVKNPSDKVYDGMEVKEK
CCCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]