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The map label for this gene is yobV [H]

Identifier: 152977118

GI number: 152977118

Start: 3490827

End: 3491738

Strand: Reverse

Name: yobV [H]

Synonym: Bcer98_3428

Alternate gene names: 152977118

Gene position: 3491738-3490827 (Counterclockwise)

Preceding gene: 152977119

Following gene: 152977117

Centisome position: 85.43

GC content: 31.8

Gene sequence:

>912_bases
GTGAAGACAGAGAGAATGCTTTCGATACTTATTTATTTGCTGCAAAAAGATATCATTTCTGCTGAAGAGTTAGCCAACAC
ATTTGAAGTTAGCAAACGAACGATTTATCGAGATATTGATGCGTTATCGGCGATTGGCATTCCGATTATTTCTTATTTAG
GAAAGAATGGCGGTTTTACGCTAATTGATAATTATCGATTAGACAAGTTTACATTTAGCGAAGAGGAAAAGCGTTTTTTA
CTAGAAGGTTTAACTTTAAAAAGCGAGCTTTTTGATGACGAGCAATTATCCATTTTGCAAAAGAAAATAGAGGTATTGAA
AGAAACAAAGAGAGATCACACGTCAAATATGACAGTTTCGTTCTCTACGTTACACCGAGAAACGATAGAAGAAGAGACAA
AACAAAAGGTGAAAAAAGTGCTTGTGATGATTGAGAAGGAGCAGAAACTGCAGATTTCATATGTATCACAAACAGGACAT
CTATCAAAGCGAATCATTCAGCCATTAAAACTAAATTTTATGAATGGTAGCTGGTATTTAGAAGCAGTTTGTGTATTAAG
AAAGGCTTTAAGAGTATTCAAATTGACTAGAATTAGAAGAATGGACATAATCGATGATAATACTGAGATTGTTTATGATA
GAAAGCCTGAATTTATAAAGGAGCGCAAAGAAAAGTTAGAACAGATTATGCTGTTATTTTCTAAAAGTACATTAGGTAAA
CTGTATGATTTCTTTACGGATGAAGAAATTGAAATACTTGAAGAGGGAGATGTACAAGTCACTTTTCAATATGATATTAA
TAAAAATATATTACCATTTTTGCTGATGTTTGGCAGAAATGTAAAAATTGTAGAACCGTTATGGCTAAAAAAGAAATATA
GAGAAGAAATTGAATATATTTATAAAAGCTGA

Upstream 100 bases:

>100_bases
GGAACGGTAAGATGTACCGAAAGAAAATGGCGCAGTGACGTAAAAAGACCACTCTGTTTAAGAGTGGCTTTTTACTATTA
GCACATAAGGAGGGGAGTCA

Downstream 100 bases:

>100_bases
CAGACTGTTGTCATATTTTGTATGTTACCCTTTACTTATTAAATATTGGGGGGATATACATGAATATAGCAGTTACTGAA
AAACAGGTGTATGGGAAAAA

Product: helix-turn-helix type 11 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MKTERMLSILIYLLQKDIISAEELANTFEVSKRTIYRDIDALSAIGIPIISYLGKNGGFTLIDNYRLDKFTFSEEEKRFL
LEGLTLKSELFDDEQLSILQKKIEVLKETKRDHTSNMTVSFSTLHRETIEEETKQKVKKVLVMIEKEQKLQISYVSQTGH
LSKRIIQPLKLNFMNGSWYLEAVCVLRKALRVFKLTRIRRMDIIDDNTEIVYDRKPEFIKERKEKLEQIMLLFSKSTLGK
LYDFFTDEEIEILEEGDVQVTFQYDINKNILPFLLMFGRNVKIVEPLWLKKKYREEIEYIYKS

Sequences:

>Translated_303_residues
MKTERMLSILIYLLQKDIISAEELANTFEVSKRTIYRDIDALSAIGIPIISYLGKNGGFTLIDNYRLDKFTFSEEEKRFL
LEGLTLKSELFDDEQLSILQKKIEVLKETKRDHTSNMTVSFSTLHRETIEEETKQKVKKVLVMIEKEQKLQISYVSQTGH
LSKRIIQPLKLNFMNGSWYLEAVCVLRKALRVFKLTRIRRMDIIDDNTEIVYDRKPEFIKERKEKLEQIMLLFSKSTLGK
LYDFFTDEEIEILEEGDVQVTFQYDINKNILPFLLMFGRNVKIVEPLWLKKKYREEIEYIYKS
>Mature_303_residues
MKTERMLSILIYLLQKDIISAEELANTFEVSKRTIYRDIDALSAIGIPIISYLGKNGGFTLIDNYRLDKFTFSEEEKRFL
LEGLTLKSELFDDEQLSILQKKIEVLKETKRDHTSNMTVSFSTLHRETIEEETKQKVKKVLVMIEKEQKLQISYVSQTGH
LSKRIIQPLKLNFMNGSWYLEAVCVLRKALRVFKLTRIRRMDIIDDNTEIVYDRKPEFIKERKEKLEQIMLLFSKSTLGK
LYDFFTDEEIEILEEGDVQVTFQYDINKNILPFLLMFGRNVKIVEPLWLKKKYREEIEYIYKS

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35971; Mature: 35971

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTERMLSILIYLLQKDIISAEELANTFEVSKRTIYRDIDALSAIGIPIISYLGKNGGFT
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LIDNYRLDKFTFSEEEKRFLLEGLTLKSELFDDEQLSILQKKIEVLKETKRDHTSNMTVS
EEECCEECCEECCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
FSTLHRETIEEETKQKVKKVLVMIEKEQKLQISYVSQTGHLSKRIIQPLKLNFMNGSWYL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHEEEECCHHHH
EAVCVLRKALRVFKLTRIRRMDIIDDNTEIVYDRKPEFIKERKEKLEQIMLLFSKSTLGK
HHHHHHHHHHHHHHHHHHHHHCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYDFFTDEEIEILEEGDVQVTFQYDINKNILPFLLMFGRNVKIVEPLWLKKKYREEIEYI
HHHHCCCCCHHEEECCCEEEEEEECCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHHH
YKS
HCC
>Mature Secondary Structure
MKTERMLSILIYLLQKDIISAEELANTFEVSKRTIYRDIDALSAIGIPIISYLGKNGGFT
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
LIDNYRLDKFTFSEEEKRFLLEGLTLKSELFDDEQLSILQKKIEVLKETKRDHTSNMTVS
EEECCEECCEECCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE
FSTLHRETIEEETKQKVKKVLVMIEKEQKLQISYVSQTGHLSKRIIQPLKLNFMNGSWYL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHEEEECCHHHH
EAVCVLRKALRVFKLTRIRRMDIIDDNTEIVYDRKPEFIKERKEKLEQIMLLFSKSTLGK
HHHHHHHHHHHHHHHHHHHHHCEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHH
LYDFFTDEEIEILEEGDVQVTFQYDINKNILPFLLMFGRNVKIVEPLWLKKKYREEIEYI
HHHHCCCCCHHEEECCCEEEEEEECCCCCHHHHHHHHCCCCEEECHHHHHHHHHHHHHHH
YKS
HCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]