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The map label for this gene is yndB [H]

Identifier: 152977067

GI number: 152977067

Start: 3443545

End: 3443973

Strand: Reverse

Name: yndB [H]

Synonym: Bcer98_3374

Alternate gene names: 152977067

Gene position: 3443973-3443545 (Counterclockwise)

Preceding gene: 152977068

Following gene: 152977066

Centisome position: 84.27

GC content: 36.83

Gene sequence:

>429_bases
ATGAAACAAAAAGATATGGTACAAGATATTGTACAGACCGCTATTTTTCATGCACCAATTCAAAAAGTATGGGATAAAGT
ATCCACTGCTGAAGGGATTGCCTCTTGGTTTATGCCAAATAACTTTGAACCAAAGGTGGGACATGAGTTTTATGTACAGT
CGCCTTTTGGGCCATCACCGTGTAAAGTATTAGAAATTGATGAACCGAATCGTGTCGTTTTTTCATGGGATACAGATGGT
TGGATCGTTTCATTTATATTGAAAGACTTAGGAGATAAAACAGAATTTACTCTTATTCATAGTGGATGGAAACAACCTGA
GGAGACAATTGCGAAAGCAAATGAAAAAGTATCTGTTATTCGTGATAGAATGGCTGGTGGCTGGGTAGCGATTGTAAATG
AAAAACTGAAAAAAGTTGTTGAGGGATAA

Upstream 100 bases:

>100_bases
AAAAAGAAGGAATCGTTGCCGTGCCCCTAAAAGGTGTTATATTGTACAAAAATGAAACGAAAAAGTGTTACGTTTTGAAG
TGAAATAAAGGAGAGAGAAA

Downstream 100 bases:

>100_bases
ATGTCTTCCGCAGCGGCAAAATATGATGTATTTCAAGCGATTGTTGACCCAACACGCCGAGAAGTCCTTCGTTTACTAAC
TGAGGAAGAATTGTCAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKQKDMVQDIVQTAIFHAPIQKVWDKVSTAEGIASWFMPNNFEPKVGHEFYVQSPFGPSPCKVLEIDEPNRVVFSWDTDG
WIVSFILKDLGDKTEFTLIHSGWKQPEETIAKANEKVSVIRDRMAGGWVAIVNEKLKKVVEG

Sequences:

>Translated_142_residues
MKQKDMVQDIVQTAIFHAPIQKVWDKVSTAEGIASWFMPNNFEPKVGHEFYVQSPFGPSPCKVLEIDEPNRVVFSWDTDG
WIVSFILKDLGDKTEFTLIHSGWKQPEETIAKANEKVSVIRDRMAGGWVAIVNEKLKKVVEG
>Mature_142_residues
MKQKDMVQDIVQTAIFHAPIQKVWDKVSTAEGIASWFMPNNFEPKVGHEFYVQSPFGPSPCKVLEIDEPNRVVFSWDTDG
WIVSFILKDLGDKTEFTLIHSGWKQPEETIAKANEKVSVIRDRMAGGWVAIVNEKLKKVVEG

Specific function: Unknown

COG id: COG3832

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AHA1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013538 [H]

Pfam domain/function: PF08327 AHSA1 [H]

EC number: NA

Molecular weight: Translated: 16133; Mature: 16133

Theoretical pI: Translated: 5.70; Mature: 5.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKDMVQDIVQTAIFHAPIQKVWDKVSTAEGIASWFMPNNFEPKVGHEFYVQSPFGPSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
CKVLEIDEPNRVVFSWDTDGWIVSFILKDLGDKTEFTLIHSGWKQPEETIAKANEKVSVI
CEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHHHHH
RDRMAGGWVAIVNEKLKKVVEG
HHHHCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQKDMVQDIVQTAIFHAPIQKVWDKVSTAEGIASWFMPNNFEPKVGHEFYVQSPFGPSP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
CKVLEIDEPNRVVFSWDTDGWIVSFILKDLGDKTEFTLIHSGWKQPEETIAKANEKVSVI
CEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHHHHH
RDRMAGGWVAIVNEKLKKVVEG
HHHHCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]