Click here to switch to the map view.

The map label for this gene is tpx [H]

Identifier: 152977007

GI number: 152977007

Start: 3382375

End: 3382875

Strand: Reverse

Name: tpx [H]

Synonym: Bcer98_3312

Alternate gene names: 152977007

Gene position: 3382875-3382375 (Counterclockwise)

Preceding gene: 152977008

Following gene: 152977006

Centisome position: 82.77

GC content: 38.92

Gene sequence:

>501_bases
GTGGCAAACGTAACTTTTAAAGGTAATCCAATGACTTTAGTTGGAACAGAAGTTAAAGTTGGCGATCAAGCACCAAACTT
TCAACTATTAGCAAATGACTTATCTCCAGTAAGTTTAGAAACATATAAAGGTCAAGTGAAATTAATTAGCGTTGTCCCTT
CAATTGACACAGGTGTATGCGATGCGCAAACACGCCGTTTTAATGAAGAGGCAGCTGGTATTGAAAATACAAAAGTATTA
ACAATTAGCGTTGATTTACCATTCGCTCAAAAACGCTGGTGTGCAGCAAACGGTTTAGAAAACGTAGTAACACTTTCTGA
CCACCGTGACCTTTCATTTGGTGAAGCATATGGTGTTGTAATGAAAGAACTTCGTTTACTTGCTCGCGCGGTATTTGTAG
TAGATAGCAACGACAAAGTTGTATACGTAGAATACGTAAGTGAAGGTACAAACCATCCAAACTATGAAGCGGCATTAGAA
GCAGCAAAAGCAGCGAAGTGA

Upstream 100 bases:

>100_bases
TTATTTTTTTGTAAATGAAGCAATTTTGTTTGCATTCTGGCTAGGGACAAACTATCATTTACAGTGTACATATTTTATTT
AAATAAAGGAGGAGTTTTAA

Downstream 100 bases:

>100_bases
TAAAAGGGAGGCGGCCTCTTTCTAAGAGGTCGTTTTTTCTCATATAGGATGAAATGGAAAAAGTATTCATATCGCTTTCA
ATTTGAAAAGGGAGCTCTAA

Product: redoxin domain-containing protein

Products: oxidized thioredoxin; H2O [C]

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MANVTFKGNPMTLVGTEVKVGDQAPNFQLLANDLSPVSLETYKGQVKLISVVPSIDTGVCDAQTRRFNEEAAGIENTKVL
TISVDLPFAQKRWCAANGLENVVTLSDHRDLSFGEAYGVVMKELRLLARAVFVVDSNDKVVYVEYVSEGTNHPNYEAALE
AAKAAK

Sequences:

>Translated_166_residues
MANVTFKGNPMTLVGTEVKVGDQAPNFQLLANDLSPVSLETYKGQVKLISVVPSIDTGVCDAQTRRFNEEAAGIENTKVL
TISVDLPFAQKRWCAANGLENVVTLSDHRDLSFGEAYGVVMKELRLLARAVFVVDSNDKVVYVEYVSEGTNHPNYEAALE
AAKAAK
>Mature_165_residues
ANVTFKGNPMTLVGTEVKVGDQAPNFQLLANDLSPVSLETYKGQVKLISVVPSIDTGVCDAQTRRFNEEAAGIENTKVLT
ISVDLPFAQKRWCAANGLENVVTLSDHRDLSFGEAYGVVMKELRLLARAVFVVDSNDKVVYVEYVSEGTNHPNYEAALEA
AKAAK

Specific function: Has antioxidant activity. Could remove peroxides or H(2)O(2) [H]

COG id: COG2077

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1787584, Length=164, Percent_Identity=50, Blast_Score=159, Evalue=8e-41,

Paralogues:

None

Copy number: 2480 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 160 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018219
- InterPro:   IPR002065
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: 1.11.1.- [C]

Molecular weight: Translated: 18036; Mature: 17904

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01265 TPX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVTFKGNPMTLVGTEVKVGDQAPNFQLLANDLSPVSLETYKGQVKLISVVPSIDTGVC
CCCEEECCCCEEEEECEEEECCCCCCEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCC
DAQTRRFNEEAAGIENTKVLTISVDLPFAQKRWCAANGLENVVTLSDHRDLSFGEAYGVV
CHHHHHCCHHHCCCCCCEEEEEEEECCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH
MKELRLLARAVFVVDSNDKVVYVEYVSEGTNHPNYEAALEAAKAAK
HHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
ANVTFKGNPMTLVGTEVKVGDQAPNFQLLANDLSPVSLETYKGQVKLISVVPSIDTGVC
CCEEECCCCEEEEECEEEECCCCCCEEEEECCCCCCEEEECCCEEEEEEEECCCCCCCC
DAQTRRFNEEAAGIENTKVLTISVDLPFAQKRWCAANGLENVVTLSDHRDLSFGEAYGVV
CHHHHHCCHHHCCCCCCEEEEEEEECCCCHHHHHHCCCCCCEEEECCCCCCCCHHHHHHH
MKELRLLARAVFVVDSNDKVVYVEYVSEGTNHPNYEAALEAAKAAK
HHHHHHHHHEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced thioredoxin; H2O2 [C]

Specific reaction: reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]