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The map label for this gene is nrnA [H]

Identifier: 152976988

GI number: 152976988

Start: 3362951

End: 3363883

Strand: Reverse

Name: nrnA [H]

Synonym: Bcer98_3291

Alternate gene names: 152976988

Gene position: 3363883-3362951 (Counterclockwise)

Preceding gene: 152976990

Following gene: 152976985

Centisome position: 82.31

GC content: 37.62

Gene sequence:

>933_bases
ATGCATGAACAAATTTTAGCGGCAATCCAAGAGTTTGATACAATTATTATTCATCGTCATGTGCGTCCAGATCCAGATGC
ACTAGGATCTCAATGTGGACTGGGCACAATGTTACAAGAATCGTTTCCAGAAAAAAATATTTATATGGTTGGTTACAATG
AACCGTCTTTATCGTATTTACGAGTAATGGACGAGATTGAAGATAGTGTATATGAAAATGCACTTGTTATTGTTTGTGAT
ACAGCCAATCAGGAACGTGTTTGTGATCAGCGCTATACAAAAGGGAAGATGTTAATTAAAATTGATCATCATCCAAATGA
AGACCCGTACGGGGATATTACATGGGTGGATACAACAGCAAGCTCTACAAGTGAATTAATTTACGAGTTTTATTCTTATG
GGAAAGAGAAAGGCTTAAAAATGACAGCGGAAGCAGCGCGTCTTATTTTCGCAGGAATTATTGGAGATACAGGACGTTTC
TTATTTCCGAATACAACCGCAAAAACGTTCCGCTATGTCAGTGAACTTGTCGAAATGGGTGTTACATTTACTGAATTATA
TGATGAGATGTATAAAACGAAAGAGAAAATCGCTCGTTTAAACGGCTACATTTTACAAAATTTTACGATGACAGAAGAAG
GTGCGGCCTACATTAAGTTAACGAAAGAAATATTACAACAATTTGATGTGCTTCCTTCAGAAGCATCTGGTGTTGTAGGA
GCGCTTGGTAATATTGATGGATTGAAATCATGGGTTCTGTTTTTAGAAGAGGACGATGTTATTCGTGTTCGTCTTCGTTC
AAAGGGACCTGTTATTAATACTTTAGCAATGCAATATAATGGTGGGGGACATCCGATGGCTTCTGGTGCGAAAGTATCTT
CTTGGGAAGAAGCAGATCGTCTTTTTGAAGATTTACGTGTCATTTGCAAGTAA

Upstream 100 bases:

>100_bases
AAAGGAATTGTTCGCATGTATGAAATATTTTCCGCTATAATGGAGAATAAAGTGAAAATAGGGTATATAAATATCGATTG
ATACAAAGGAGATTATACAT

Downstream 100 bases:

>100_bases
GTAGAGGGAATGCTATCGTTGTTGGAATTATTTCAATAGACTGAGGAGAAAAGTAGAGCGAAAAGGCTCTACTTTTCTTT
TTCTATATGAACACTAATTT

Product: phosphoesterase domain-containing protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MHEQILAAIQEFDTIIIHRHVRPDPDALGSQCGLGTMLQESFPEKNIYMVGYNEPSLSYLRVMDEIEDSVYENALVIVCD
TANQERVCDQRYTKGKMLIKIDHHPNEDPYGDITWVDTTASSTSELIYEFYSYGKEKGLKMTAEAARLIFAGIIGDTGRF
LFPNTTAKTFRYVSELVEMGVTFTELYDEMYKTKEKIARLNGYILQNFTMTEEGAAYIKLTKEILQQFDVLPSEASGVVG
ALGNIDGLKSWVLFLEEDDVIRVRLRSKGPVINTLAMQYNGGGHPMASGAKVSSWEEADRLFEDLRVICK

Sequences:

>Translated_310_residues
MHEQILAAIQEFDTIIIHRHVRPDPDALGSQCGLGTMLQESFPEKNIYMVGYNEPSLSYLRVMDEIEDSVYENALVIVCD
TANQERVCDQRYTKGKMLIKIDHHPNEDPYGDITWVDTTASSTSELIYEFYSYGKEKGLKMTAEAARLIFAGIIGDTGRF
LFPNTTAKTFRYVSELVEMGVTFTELYDEMYKTKEKIARLNGYILQNFTMTEEGAAYIKLTKEILQQFDVLPSEASGVVG
ALGNIDGLKSWVLFLEEDDVIRVRLRSKGPVINTLAMQYNGGGHPMASGAKVSSWEEADRLFEDLRVICK
>Mature_310_residues
MHEQILAAIQEFDTIIIHRHVRPDPDALGSQCGLGTMLQESFPEKNIYMVGYNEPSLSYLRVMDEIEDSVYENALVIVCD
TANQERVCDQRYTKGKMLIKIDHHPNEDPYGDITWVDTTASSTSELIYEFYSYGKEKGLKMTAEAARLIFAGIIGDTGRF
LFPNTTAKTFRYVSELVEMGVTFTELYDEMYKTKEKIARLNGYILQNFTMTEEGAAYIKLTKEILQQFDVLPSEASGVVG
ALGNIDGLKSWVLFLEEDDVIRVRLRSKGPVINTLAMQYNGGGHPMASGAKVSSWEEADRLFEDLRVICK

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 35021; Mature: 35021

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEQILAAIQEFDTIIIHRHVRPDPDALGSQCGLGTMLQESFPEKNIYMVGYNEPSLSYL
CCHHHHHHHHHHCEEEEEECCCCCHHHHCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHH
RVMDEIEDSVYENALVIVCDTANQERVCDQRYTKGKMLIKIDHHPNEDPYGDITWVDTTA
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC
SSTSELIYEFYSYGKEKGLKMTAEAARLIFAGIIGDTGRFLFPNTTAKTFRYVSELVEMG
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCC
VTFTELYDEMYKTKEKIARLNGYILQNFTMTEEGAAYIKLTKEILQQFDVLPSEASGVVG
CHHHHHHHHHHHHHHHHHHHCCEEEECEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
ALGNIDGLKSWVLFLEEDDVIRVRLRSKGPVINTLAMQYNGGGHPMASGAKVSSWEEADR
HHCCHHHHHHEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHH
LFEDLRVICK
HHHHHHHHCC
>Mature Secondary Structure
MHEQILAAIQEFDTIIIHRHVRPDPDALGSQCGLGTMLQESFPEKNIYMVGYNEPSLSYL
CCHHHHHHHHHHCEEEEEECCCCCHHHHCCCCCCCHHHHHHCCCCCEEEEECCCCCHHHH
RVMDEIEDSVYENALVIVCDTANQERVCDQRYTKGKMLIKIDHHPNEDPYGDITWVDTTA
HHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCC
SSTSELIYEFYSYGKEKGLKMTAEAARLIFAGIIGDTGRFLFPNTTAKTFRYVSELVEMG
CHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHCC
VTFTELYDEMYKTKEKIARLNGYILQNFTMTEEGAAYIKLTKEILQQFDVLPSEASGVVG
CHHHHHHHHHHHHHHHHHHHCCEEEECEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHH
ALGNIDGLKSWVLFLEEDDVIRVRLRSKGPVINTLAMQYNGGGHPMASGAKVSSWEEADR
HHCCHHHHHHEEEEECCCCEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCHHHHHH
LFEDLRVICK
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]