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The map label for this gene is recO [H]

Identifier: 152976729

GI number: 152976729

Start: 3072530

End: 3073276

Strand: Reverse

Name: recO [H]

Synonym: Bcer98_3024

Alternate gene names: 152976729

Gene position: 3073276-3072530 (Counterclockwise)

Preceding gene: 152976730

Following gene: 152976728

Centisome position: 75.2

GC content: 35.88

Gene sequence:

>747_bases
ATGTTTCAAAAAGTTGAGGGCATTGTTATCCGAACAACAGATTACGGAGAAACGAACAAGATTGTTACTATATTTTCTCG
TGAATTTGGAAAAATAAGTGTAATGGCAAGAGGAGCGAAAAAACCAAAAAGTAGGTTAGCATCTATTTCGCAACTCATGA
CGCATGGTCATTTCCTAATTCAAATGGGATCTGGTCTCGGAACTTTGCAACAAGGTGAAATGATTTCATCGATGAAAGAA
ATTCGAGAAGATATTTTTTTAACTGCTTATGCATCGTTTATCGTGGAATTGACAGATAAAGCCACGGAAGATAAAAAGAA
CAATCCGTATTTATTTGAAATGTTATATCAGACACTTCACTATATGTGTGATGGTGTTGATCCTGAAGTATTATCTCTTA
TTTATCAAACGAAAATGCTTCCGGTATTAGGGATGCATCCATACTTTGATACATGTGCGATTTGTCACCAAGAAACAGAC
TTTGTCGCCTTCTCTGTAAGAGAAGGCGGTTTTCTGTGCTTTCGTCACGCAGAACAAGATCCGTATCGCATTCCAGTTGG
TGAGGCGGTTCATAAGTTATTACGTCTCTTTTATCACTTTGACTTAGGTCGGCTTGGTAATGTATCAGTAAAAGATGAAA
CGAAGCGACAAATTCGTACCGTATTGAATACATATTATGATGAATATTGTGGCATATATTTGAAATCAAGACGTTTTCTT
GAACAACTTGATAAATTTCAAATATAA

Upstream 100 bases:

>100_bases
AGATCTAAATGATGAGATGGATCAACATGAAGAGGAGCTAGCACATCTAGATTCTCCAATTTCTTGACCCGTTTTGTTCA
ATCCTTGGATGGTGACGAAC

Downstream 100 bases:

>100_bases
TGAGGACCATATGAAGGTCCTTTTTACATGCTTTCTTTTTCAAATAGCATATTTAGTATATAATATTTAAGAGATAGTAT
AACTTTTTTGTTTTGTATTA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLIQMGSGLGTLQQGEMISSMKE
IREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQTLHYMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETD
FVAFSVREGGFLCFRHAEQDPYRIPVGEAVHKLLRLFYHFDLGRLGNVSVKDETKRQIRTVLNTYYDEYCGIYLKSRRFL
EQLDKFQI

Sequences:

>Translated_248_residues
MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLIQMGSGLGTLQQGEMISSMKE
IREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQTLHYMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETD
FVAFSVREGGFLCFRHAEQDPYRIPVGEAVHKLLRLFYHFDLGRLGNVSVKDETKRQIRTVLNTYYDEYCGIYLKSRRFL
EQLDKFQI
>Mature_248_residues
MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLIQMGSGLGTLQQGEMISSMKE
IREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQTLHYMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETD
FVAFSVREGGFLCFRHAEQDPYRIPVGEAVHKLLRLFYHFDLGRLGNVSVKDETKRQIRTVLNTYYDEYCGIYLKSRRFL
EQLDKFQI

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 28693; Mature: 28693

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLI
CCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEE
QMGSGLGTLQQGEMISSMKEIREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQTLH
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
YMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETDFVAFSVREGGFLCFRHAEQD
HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCCC
PYRIPVGEAVHKLLRLFYHFDLGRLGNVSVKDETKRQIRTVLNTYYDEYCGIYLKSRRFL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQLDKFQI
HHHHHCCC
>Mature Secondary Structure
MFQKVEGIVIRTTDYGETNKIVTIFSREFGKISVMARGAKKPKSRLASISQLMTHGHFLI
CCCCCCCEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEE
QMGSGLGTLQQGEMISSMKEIREDIFLTAYASFIVELTDKATEDKKNNPYLFEMLYQTLH
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
YMCDGVDPEVLSLIYQTKMLPVLGMHPYFDTCAICHQETDFVAFSVREGGFLCFRHAEQD
HHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEECCCCC
PYRIPVGEAVHKLLRLFYHFDLGRLGNVSVKDETKRQIRTVLNTYYDEYCGIYLKSRRFL
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQLDKFQI
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA