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The map label for this gene is yqaT [H]

Identifier: 152976656

GI number: 152976656

Start: 3006621

End: 3007925

Strand: Reverse

Name: yqaT [H]

Synonym: Bcer98_2947

Alternate gene names: 152976656

Gene position: 3007925-3006621 (Counterclockwise)

Preceding gene: 152976657

Following gene: 152976655

Centisome position: 73.6

GC content: 38.16

Gene sequence:

>1305_bases
ATGACGATGAATAAGGCTCCATTAAACGTACAGCCAAAAATTAATTTTAGAGAAGTCATTGGAAAGGGCTATAACCGCTT
CTGGCACTGCAAAAACTTCTATCGAGTCTGTAAAGGCTCTCGTGGCTCCAAGAAATCGAAAACCACCGTAATAAACCTCA
CAAAAAGGCTCATGCAATATCCTTGGGCTAATATCCTCGTTGTTCGTCGATTCTCGAACACTCTCAAACAATCCTGTTAT
ACCGATTTTAAATGGGCGATTAATCGCCTTAAAGTAAAACATCTGTTTAAGCTCAATGAATCTATGCCAGAGATAACGTA
TATACCGACTGGGCAAAAAATTTTATTTCGTGGTCTCGACGATCCGTTGAAAATTACATCTATTACAGTTGATGTAGGTA
TATTATGTTGGGCATGGTTTGAGGAAGCGTATGAGATTGAGGACCAACACAAATTTGAAACTGTTGTTGAGTCTATTCGC
GGTTCGTGGGATTCGCCAGACTTCTTTAAACAGATTACTGTGACATTTAACCCATGGAGTGAGAATCATTGGCTAAAGTC
TTACTTCTTCGATGAAGAAACACAAGCCTATGATACATTCGCAATTACTACTACTTATAAGTGTAATGAGTGGTTAGATA
AACAGGATAGGGCACGATATGAGAGTTTATATGAGAAGAATCCAAGACGCGCTCGCATTGTGTGTGATGGTGAGTGGGGC
GTGGCTGATGGTCTTGTGTATGAAAACTTCCAAGTGCGTGACTTTGATATCGATGAGATACGTCAAAGGAAAGATGTACA
AAGCGCTTTCGGTCTCGATTTTGGTTATACGAACGACCCAACCGCCTTATGTTGCTCATTAGTAGATTTACGAAATGAAA
CTATTTACGTATTCGATGAGTATTATGAAAAGGGTATGAGTAATAAGAGAATCGCAAAAATGATTGAAGAAAAAGGTTAC
TCAAAAGAGAAGATTACAGCTGATTCGGCTGAACCAAAAAGTATTGATGAGATTAAATCTCTCGGTATTAGAAGAATTGA
AGGAGCACGCAAAGGAAAAGACTCTATCAACAATGGTATTCAATTCATTCAAGGTTTCAAAATCGTAATCCATCCGTCTT
GTGTAGAGTTTATTAAAGAGATTAATAACTATATATACGCAACGGATAAGAAAACAGGAAAAAGGCTTAATACGCCAATT
GATGATTTTAACCACCTAATGGACGCATGGCGTTACTCAATGGAAAGGTTCATGAAAAAAGGTGGCAAATTGAAGTCAAT
CAACAAGTCATCACTTGGATTGTAG

Upstream 100 bases:

>100_bases
GTAAAGGCGGCGGAGCTTCTTGGAAAACGTTATATGATGTGGACTGAAAAGAAAGAAGTTGAGGTTACAGTGCCGACATT
CGTTGATGATGTGCCGCTAG

Downstream 100 bases:

>100_bases
GGGGTGAAACATTGCTGACATTCGAACAAGCGAGATTGCTATACACTCGTTTCAAAACAGAAGAAAAAGCATTTAAAAGG
TTGCAAAAACTTTATGACTA

Product: PBSX family phage terminase large subunit

Products: NA

Alternate protein names: ORF50 [H]

Number of amino acids: Translated: 434; Mature: 433

Protein sequence:

>434_residues
MTMNKAPLNVQPKINFREVIGKGYNRFWHCKNFYRVCKGSRGSKKSKTTVINLTKRLMQYPWANILVVRRFSNTLKQSCY
TDFKWAINRLKVKHLFKLNESMPEITYIPTGQKILFRGLDDPLKITSITVDVGILCWAWFEEAYEIEDQHKFETVVESIR
GSWDSPDFFKQITVTFNPWSENHWLKSYFFDEETQAYDTFAITTTYKCNEWLDKQDRARYESLYEKNPRRARIVCDGEWG
VADGLVYENFQVRDFDIDEIRQRKDVQSAFGLDFGYTNDPTALCCSLVDLRNETIYVFDEYYEKGMSNKRIAKMIEEKGY
SKEKITADSAEPKSIDEIKSLGIRRIEGARKGKDSINNGIQFIQGFKIVIHPSCVEFIKEINNYIYATDKKTGKRLNTPI
DDFNHLMDAWRYSMERFMKKGGKLKSINKSSLGL

Sequences:

>Translated_434_residues
MTMNKAPLNVQPKINFREVIGKGYNRFWHCKNFYRVCKGSRGSKKSKTTVINLTKRLMQYPWANILVVRRFSNTLKQSCY
TDFKWAINRLKVKHLFKLNESMPEITYIPTGQKILFRGLDDPLKITSITVDVGILCWAWFEEAYEIEDQHKFETVVESIR
GSWDSPDFFKQITVTFNPWSENHWLKSYFFDEETQAYDTFAITTTYKCNEWLDKQDRARYESLYEKNPRRARIVCDGEWG
VADGLVYENFQVRDFDIDEIRQRKDVQSAFGLDFGYTNDPTALCCSLVDLRNETIYVFDEYYEKGMSNKRIAKMIEEKGY
SKEKITADSAEPKSIDEIKSLGIRRIEGARKGKDSINNGIQFIQGFKIVIHPSCVEFIKEINNYIYATDKKTGKRLNTPI
DDFNHLMDAWRYSMERFMKKGGKLKSINKSSLGL
>Mature_433_residues
TMNKAPLNVQPKINFREVIGKGYNRFWHCKNFYRVCKGSRGSKKSKTTVINLTKRLMQYPWANILVVRRFSNTLKQSCYT
DFKWAINRLKVKHLFKLNESMPEITYIPTGQKILFRGLDDPLKITSITVDVGILCWAWFEEAYEIEDQHKFETVVESIRG
SWDSPDFFKQITVTFNPWSENHWLKSYFFDEETQAYDTFAITTTYKCNEWLDKQDRARYESLYEKNPRRARIVCDGEWGV
ADGLVYENFQVRDFDIDEIRQRKDVQSAFGLDFGYTNDPTALCCSLVDLRNETIYVFDEYYEKGMSNKRIAKMIEEKGYS
KEKITADSAEPKSIDEIKSLGIRRIEGARKGKDSINNGIQFIQGFKIVIHPSCVEFIKEINNYIYATDKKTGKRLNTPID
DFNHLMDAWRYSMERFMKKGGKLKSINKSSLGL

Specific function: May function as a terminase [H]

COG id: COG1783

COG function: function code R; Phage terminase large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis xtmB and phage SPP1 terminase large subunit [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006701
- InterPro:   IPR006437 [H]

Pfam domain/function: PF04466 Terminase_3 [H]

EC number: NA

Molecular weight: Translated: 50929; Mature: 50797

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMNKAPLNVQPKINFREVIGKGYNRFWHCKNFYRVCKGSRGSKKSKTTVINLTKRLMQY
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
PWANILVVRRFSNTLKQSCYTDFKWAINRLKVKHLFKLNESMPEITYIPTGQKILFRGLD
CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCC
DPLKITSITVDVGILCWAWFEEAYEIEDQHKFETVVESIRGSWDSPDFFKQITVTFNPWS
CCEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCC
ENHWLKSYFFDEETQAYDTFAITTTYKCNEWLDKQDRARYESLYEKNPRRARIVCDGEWG
CCCHHHHHHCCCCCCCCEEEEEEEEEECHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCC
VADGLVYENFQVRDFDIDEIRQRKDVQSAFGLDFGYTNDPTALCCSLVDLRNETIYVFDE
CCCCEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEH
YYEKGMSNKRIAKMIEEKGYSKEKITADSAEPKSIDEIKSLGIRRIEGARKGKDSINNGI
HHHCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHCCHHHHCCHHCCHHHHHHHH
QFIQGFKIVIHPSCVEFIKEINNYIYATDKKTGKRLNTPIDDFNHLMDAWRYSMERFMKK
HHHCCCEEEECHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GGKLKSINKSSLGL
CCCEECCCHHCCCC
>Mature Secondary Structure 
TMNKAPLNVQPKINFREVIGKGYNRFWHCKNFYRVCKGSRGSKKSKTTVINLTKRLMQY
CCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHC
PWANILVVRRFSNTLKQSCYTDFKWAINRLKVKHLFKLNESMPEITYIPTGQKILFRGLD
CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHCCCCC
DPLKITSITVDVGILCWAWFEEAYEIEDQHKFETVVESIRGSWDSPDFFKQITVTFNPWS
CCEEEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHEEEEEEECCCC
ENHWLKSYFFDEETQAYDTFAITTTYKCNEWLDKQDRARYESLYEKNPRRARIVCDGEWG
CCCHHHHHHCCCCCCCCEEEEEEEEEECHHHCCHHHHHHHHHHHHCCCCEEEEEECCCCC
VADGLVYENFQVRDFDIDEIRQRKDVQSAFGLDFGYTNDPTALCCSLVDLRNETIYVFDE
CCCCEEECCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCEEEEEEH
YYEKGMSNKRIAKMIEEKGYSKEKITADSAEPKSIDEIKSLGIRRIEGARKGKDSINNGI
HHHCCCCCHHHHHHHHHCCCCCHHCCCCCCCCCCHHHHHHCCHHHHCCHHCCHHHHHHHH
QFIQGFKIVIHPSCVEFIKEINNYIYATDKKTGKRLNTPIDDFNHLMDAWRYSMERFMKK
HHHCCCEEEECHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GGKLKSINKSSLGL
CCCEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]