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The map label for this gene is 152976641

Identifier: 152976641

GI number: 152976641

Start: 2990394

End: 2990834

Strand: Reverse

Name: 152976641

Synonym: Bcer98_2932

Alternate gene names: NA

Gene position: 2990834-2990394 (Counterclockwise)

Preceding gene: 152976642

Following gene: 152976640

Centisome position: 73.18

GC content: 36.05

Gene sequence:

>441_bases
ATGGAGCGTATCGATGTATTACTAAAAACATTTATTGCTACTTTTGGTGGCTTTTGCGGTTATTTCTTAGGAGGATGGGA
TACAACATTGAAAGTTTTAGTGATTATGGCAGCTATTGATTACCTCACAGGAGTAATCGCAGCAGGGTATAACGGGCAAT
TAAAAAGCAAAGTTGGTTTCAAAGGCATCGCTAAAAAAGTGGTTCTTTTTCTTTTGGTTGGAGTGGCAGCTCAATTAGAT
TCTACATTTGGTAGCAATAGTGCTATCCGTGAAGCAACAATCTTTTTCTTTATTGGAAACGAGCTATTATCACTTTTAGA
AAATGCTGGACGAATGGGGATTCCCCTTCCACAAGCATTAACAAATGCAGTTGAAATTTTAAGTAATAAGAGCAATAAGA
CAAGCTCTGAATATGATAATAAAAAAGGAGATGTTGAGTAA

Upstream 100 bases:

>100_bases
AATCGTAGAATAGAAGTGTTAGAACAATTATTAGTCGATAAATTAGTGAAATCAGATCAGCAATAAGCTGTTTTTTTATT
TTGTATAAAGGAGTGAAAAG

Downstream 100 bases:

>100_bases
TGGGACACATTGTAGATATTTCAAAATGGAATGGTGACATTAACTGGCCTATAGCAAAGCAATACATTGATTTCATCATC
GCTCGTGTACAAGATGGTTC

Product: toxin secretion/phage lysis holin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MERIDVLLKTFIATFGGFCGYFLGGWDTTLKVLVIMAAIDYLTGVIAAGYNGQLKSKVGFKGIAKKVVLFLLVGVAAQLD
STFGSNSAIREATIFFFIGNELLSLLENAGRMGIPLPQALTNAVEILSNKSNKTSSEYDNKKGDVE

Sequences:

>Translated_146_residues
MERIDVLLKTFIATFGGFCGYFLGGWDTTLKVLVIMAAIDYLTGVIAAGYNGQLKSKVGFKGIAKKVVLFLLVGVAAQLD
STFGSNSAIREATIFFFIGNELLSLLENAGRMGIPLPQALTNAVEILSNKSNKTSSEYDNKKGDVE
>Mature_146_residues
MERIDVLLKTFIATFGGFCGYFLGGWDTTLKVLVIMAAIDYLTGVIAAGYNGQLKSKVGFKGIAKKVVLFLLVGVAAQLD
STFGSNSAIREATIFFFIGNELLSLLENAGRMGIPLPQALTNAVEILSNKSNKTSSEYDNKKGDVE

Specific function: Unknown

COG id: COG4824

COG function: function code R; Phage-related holin (Lysis protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Cp-1 holin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006480 [H]

Pfam domain/function: PF05105 Phage_holin_4 [H]

EC number: NA

Molecular weight: Translated: 15692; Mature: 15692

Theoretical pI: Translated: 8.43; Mature: 8.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERIDVLLKTFIATFGGFCGYFLGGWDTTLKVLVIMAAIDYLTGVIAAGYNGQLKSKVGF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCH
KGIAKKVVLFLLVGVAAQLDSTFGSNSAIREATIFFFIGNELLSLLENAGRMGIPLPQAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
TNAVEILSNKSNKTSSEYDNKKGDVE
HHHHHHHHCCCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MERIDVLLKTFIATFGGFCGYFLGGWDTTLKVLVIMAAIDYLTGVIAAGYNGQLKSKVGF
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCH
KGIAKKVVLFLLVGVAAQLDSTFGSNSAIREATIFFFIGNELLSLLENAGRMGIPLPQAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
TNAVEILSNKSNKTSSEYDNKKGDVE
HHHHHHHHCCCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]