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The map label for this gene is ypoP [H]

Identifier: 152976491

GI number: 152976491

Start: 2860490

End: 2860909

Strand: Reverse

Name: ypoP [H]

Synonym: Bcer98_2780

Alternate gene names: 152976491

Gene position: 2860909-2860490 (Counterclockwise)

Preceding gene: 152976494

Following gene: 152976490

Centisome position: 70.0

GC content: 34.29

Gene sequence:

>420_bases
GTGAACGAACAAAGAGAAGCGTTGATTTTAGATTTATCAGTATCATTTCGAAAGATGATACGTTTATTACAAACCGATAT
TAATACACGTTTTTCAGAGCATATGCCATATAATGAATTCTCTGTATTACGTGCATTATTTTTGAAGAGTCCACAAATGG
CTTCGCAAATTGCGAATGAGGTAAATGTAACATCCAGCCATATTACAGCGGTAACAGATCGTCTTGTGCGAAAAGGATTT
GTAATGAGAAAACGTTCGAATTCAGATCGTCGTATTGTATATTTAGAGATTACAGAACATGGACGAGAAGTAACGGAAGA
ACTCGAAGCGATACGTAAAGAATACTATAGAGATAAATTTAAAGATTGGAGCGACCAAGAAATAGAGATGGTATTAGAAC
TATTTGATCGCATATTATAA

Upstream 100 bases:

>100_bases
AAAGTTACAGAAGGAAGCAGAGGTAGAAAGAAATCGTATACAATATAGGTGTTTATAGATTATAATTATGTATAAATATA
ATGAAAAAGGGTCGAGGATA

Downstream 100 bases:

>100_bases
TCAATTGAGGATAGGGAGCAGAAGCTTTCCTATTCTTTTTTTTGAATAAAAATATTTTGAAATTCCGATACTTTAATTAA
AAAGTATCGGAGGAAAAATG

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MNEQREALILDLSVSFRKMIRLLQTDINTRFSEHMPYNEFSVLRALFLKSPQMASQIANEVNVTSSHITAVTDRLVRKGF
VMRKRSNSDRRIVYLEITEHGREVTEELEAIRKEYYRDKFKDWSDQEIEMVLELFDRIL

Sequences:

>Translated_139_residues
MNEQREALILDLSVSFRKMIRLLQTDINTRFSEHMPYNEFSVLRALFLKSPQMASQIANEVNVTSSHITAVTDRLVRKGF
VMRKRSNSDRRIVYLEITEHGREVTEELEAIRKEYYRDKFKDWSDQEIEMVLELFDRIL
>Mature_139_residues
MNEQREALILDLSVSFRKMIRLLQTDINTRFSEHMPYNEFSVLRALFLKSPQMASQIANEVNVTSSHITAVTDRLVRKGF
VMRKRSNSDRRIVYLEITEHGREVTEELEAIRKEYYRDKFKDWSDQEIEMVLELFDRIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16616; Mature: 16616

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEQREALILDLSVSFRKMIRLLQTDINTRFSEHMPYNEFSVLRALFLKSPQMASQIANE
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH
VNVTSSHITAVTDRLVRKGFVMRKRSNSDRRIVYLEITEHGREVTEELEAIRKEYYRDKF
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHC
KDWSDQEIEMVLELFDRIL
CCCCHHHHHHHHHHHHHHC
>Mature Secondary Structure
MNEQREALILDLSVSFRKMIRLLQTDINTRFSEHMPYNEFSVLRALFLKSPQMASQIANE
CCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHH
VNVTSSHITAVTDRLVRKGFVMRKRSNSDRRIVYLEITEHGREVTEELEAIRKEYYRDKF
HCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHC
KDWSDQEIEMVLELFDRIL
CCCCHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]