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The map label for this gene is yizB [H]

Identifier: 152976439

GI number: 152976439

Start: 2814111

End: 2814443

Strand: Reverse

Name: yizB [H]

Synonym: Bcer98_2728

Alternate gene names: 152976439

Gene position: 2814443-2814111 (Counterclockwise)

Preceding gene: 152976441

Following gene: 152976438

Centisome position: 68.86

GC content: 39.94

Gene sequence:

>333_bases
ATGATGTCGACAAGTCAAATGCTAAAGGGAATTTTAGAAGGGTGTCTCCTTGCTATTATCTCTGAAGGAGAGATATACGG
ATATGAAATGAGTGAAAAGTTAGCGAAGTATGGTTTCACCATGGCGAGTGAAGGCAGTATTTATCCGCTATTAATCCGAA
TGCAAAAAGAAGGACTCATTACAAGTACAATGAAAGAATCGCCATCTGGTCCAAAGCGAAAATATTATACATTAACAGAA
AAAGGAGAAGATGCACTCGATGAATTTATGGAGCGCTGGGAAGCGATGCGTAGTAGCGTGGAGCGTTTATTACAAGGAAA
GGGGAGAAAATGA

Upstream 100 bases:

>100_bases
TAGTTATCTTGCTTTACAAAATAGTCTTTGTTATACTATTTTGTAAAGCAAGATACTCATACACATCTATCTTGTATAAC
AAGATAGAGGGAGGGTTTGA

Downstream 100 bases:

>100_bases
TGATGCAGATTTCCAAAGAAGGAGAAAAGTTTTTAACAGATACAAAGGTATATTTATTGACAAAAGGAATTAAAGAGGAA
GATATCGACATATTTTTAGA

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MMSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLITSTMKESPSGPKRKYYTLTE
KGEDALDEFMERWEAMRSSVERLLQGKGRK

Sequences:

>Translated_110_residues
MMSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLITSTMKESPSGPKRKYYTLTE
KGEDALDEFMERWEAMRSSVERLLQGKGRK
>Mature_110_residues
MMSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLITSTMKESPSGPKRKYYTLTE
KGEDALDEFMERWEAMRSSVERLLQGKGRK

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 12491; Mature: 12491

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLI
CCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCCCEEHHHEEECCCCCH
TSTMKESPSGPKRKYYTLTEKGEDALDEFMERWEAMRSSVERLLQGKGRK
HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMSTSQMLKGILEGCLLAIISEGEIYGYEMSEKLAKYGFTMASEGSIYPLLIRMQKEGLI
CCCHHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCCCCCEEHHHEEECCCCCH
TSTMKESPSGPKRKYYTLTEKGEDALDEFMERWEAMRSSVERLLQGKGRK
HHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]