| Definition | Bacillus cereus subsp. cytotoxis NVH 391-98, complete genome. |
|---|---|
| Accession | NC_009674 |
| Length | 4,087,024 |
Click here to switch to the map view.
The map label for this gene is typA [H]
Identifier: 152976370
GI number: 152976370
Start: 2745869
End: 2747713
Strand: Reverse
Name: typA [H]
Synonym: Bcer98_2658
Alternate gene names: 152976370
Gene position: 2747713-2745869 (Counterclockwise)
Preceding gene: 152976372
Following gene: 152976369
Centisome position: 67.23
GC content: 38.43
Gene sequence:
>1845_bases ATGTTGAAAAAACGACAAGATTTACGTAATATAGCAATTATTGCCCACGTTGACCATGGTAAAACAACACTTGTTGACCA GTTATTACGTCAAGCGGGAACGTTCCGTGCAAATGAGCATGTAGAAGAACGTGCAATGGATTCGAATGATTTAGAGAGAG AACGCGGTATTACGATTTTAGCGAAAAATACAGCGATTCACTATGGAGATAAACGAATTAACATTTTAGATACACCTGGA CACGCTGATTTCGGTGGTGAAGTAGAACGAATCATGCGAATGGTTGATGGTGTTTTACTTGTTGTTGATGCATATGAAGG TTGTATGCCACAAACACGATTTGTATTAAAGAAAGCACTTGAACAAAACTTAACGCCAATCGTTGTTGTAAACAAAATTG ATCGCGACTTTGCTCGTCCGGAAGAAGTTGTTGATGAAGTATTAGATTTATTCATTGAGCTAGGTGCAAATGAAGATCAA TTAGAGTTTCCGGTTGTATTCGCTTCAGCGATGAACGGAACAGCAAGCTTGGATCCAAATCCAGCAAATCAAGAAGAGAA TATGAAGTCATTATTTGAAACAATTATCAATCATATTCCGGCACCAATCGATAATAGCGATGAGCCATTGCAATTCCAAG TAGCTCTTCTTGACTATAATGATTATGTAGGCCGTATCGGAGTTGGGCGTGTATTCCGCGGTACAATGAAAGTAGGACAG CAAGTTGCTTTAATGAAAGTGGACGGAAGTGTGAAGCAATTCCGCGTAACAAAAATCTTTGGTTACATGGGATTAAAACG TCAAGAAATTGAAGAAGCAAAAGCCGGCGATTTAGTAGCTGTTTCTGGTATGGAAGACATTAACGTTGGGGAAACAGTAT GTCCGATTGACCATCAAGAAGCTCTACCTTTATTGCGCATTGATGAGCCGACATTACAAATGACGTTCCTTGTAAATAAT AGCCCATTTGCAGGTCGTGAAGGGAAATATATTACATCTCGTAAAATCGAAGAGCGTCTTCGCTCGCAATTAGAAACAGA TGTAAGTTTACGTGTAGAGAATACAGACTCTCCTGATGCATGGATTGTATCTGGCCGTGGGGAATTACATTTGTCAATCT TAATTGAAAATATGCGTCGTGAAGGCTATGAATTACAAGTATCAAAACCAGAAGTAATTATTAAAGAAATCGATGGTGTG AGATGTGAGCCTGTAGAGCGCGTGCAAATCGATGTACCAGAAGAATATACTGGTTCCATTATGGAATCTATGGGAGCTCG CAAAGGCGAAATGTTAGATATGGTGAATAACGGAAATGGTCAAGTTCGTCTAACATTTATGGTGCCAGCACGTGGATTAA TTGGTTATACAACAGAATTCTTAACGTTAACACGTGGTTATGGTATTTTGAACCACACATTTGACAGCTATCAACCAGTA CATGCTGGACAAGTTGGTGGACGTCGTCAAGGTGTTCTTGTTTCACTTGAAACAGGGAAAGCATCACAATATGGTATTAT GCAAGTTGAAGATCGCGGTGTCATCTTCGTTGAACCTGGTACAGAAGTATATACAGGTATGATTGTTGGAGAGCATACAC GTGAAAATGATTTAACGGTTAACATTGTAAAAATGAAGCAACAAACTAATATTCGTTCTGCAACAAAAGACCAAACTTCA ACAATGAAAAAACCACGCATTATGACATTAGAAGAATCATTAGAGTATTTAAATGATGATGAGTATTGTGAAGTAACGCC AGAATCTATTCGTTTGCGCAAAAAAATTCTAGATAAAAATGAACGTGAAAAAGCTGCGAAGAGAAAAAAATCTGTAGAAG CTTAA
Upstream 100 bases:
>100_bases GAATACAACTATATTTTCATTCTTGATTTTATTTTGATTGCCATTATATCCTCTTCGCTCTTATAATAGAGAAGGATTAA AAAGACACTAGGAGTTGGAC
Downstream 100 bases:
>100_bases GAGAAGGAGCTGTCTTTTCAAAAGACGGCTCTTTTTTTAAAGGTTTTATTTTTTGAAAATTTACTCTTTTAGGTGGACAG TATTTTTGTTGCAAGGTACT
Product: GTP-binding protein TypA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MLKKRQDLRNIAIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITILAKNTAIHYGDKRINILDTPG HADFGGEVERIMRMVDGVLLVVDAYEGCMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPEEVVDEVLDLFIELGANEDQ LEFPVVFASAMNGTASLDPNPANQEENMKSLFETIINHIPAPIDNSDEPLQFQVALLDYNDYVGRIGVGRVFRGTMKVGQ QVALMKVDGSVKQFRVTKIFGYMGLKRQEIEEAKAGDLVAVSGMEDINVGETVCPIDHQEALPLLRIDEPTLQMTFLVNN SPFAGREGKYITSRKIEERLRSQLETDVSLRVENTDSPDAWIVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGV RCEPVERVQIDVPEEYTGSIMESMGARKGEMLDMVNNGNGQVRLTFMVPARGLIGYTTEFLTLTRGYGILNHTFDSYQPV HAGQVGGRRQGVLVSLETGKASQYGIMQVEDRGVIFVEPGTEVYTGMIVGEHTRENDLTVNIVKMKQQTNIRSATKDQTS TMKKPRIMTLEESLEYLNDDEYCEVTPESIRLRKKILDKNEREKAAKRKKSVEA
Sequences:
>Translated_614_residues MLKKRQDLRNIAIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITILAKNTAIHYGDKRINILDTPG HADFGGEVERIMRMVDGVLLVVDAYEGCMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPEEVVDEVLDLFIELGANEDQ LEFPVVFASAMNGTASLDPNPANQEENMKSLFETIINHIPAPIDNSDEPLQFQVALLDYNDYVGRIGVGRVFRGTMKVGQ QVALMKVDGSVKQFRVTKIFGYMGLKRQEIEEAKAGDLVAVSGMEDINVGETVCPIDHQEALPLLRIDEPTLQMTFLVNN SPFAGREGKYITSRKIEERLRSQLETDVSLRVENTDSPDAWIVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGV RCEPVERVQIDVPEEYTGSIMESMGARKGEMLDMVNNGNGQVRLTFMVPARGLIGYTTEFLTLTRGYGILNHTFDSYQPV HAGQVGGRRQGVLVSLETGKASQYGIMQVEDRGVIFVEPGTEVYTGMIVGEHTRENDLTVNIVKMKQQTNIRSATKDQTS TMKKPRIMTLEESLEYLNDDEYCEVTPESIRLRKKILDKNEREKAAKRKKSVEA >Mature_614_residues MLKKRQDLRNIAIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITILAKNTAIHYGDKRINILDTPG HADFGGEVERIMRMVDGVLLVVDAYEGCMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPEEVVDEVLDLFIELGANEDQ LEFPVVFASAMNGTASLDPNPANQEENMKSLFETIINHIPAPIDNSDEPLQFQVALLDYNDYVGRIGVGRVFRGTMKVGQ QVALMKVDGSVKQFRVTKIFGYMGLKRQEIEEAKAGDLVAVSGMEDINVGETVCPIDHQEALPLLRIDEPTLQMTFLVNN SPFAGREGKYITSRKIEERLRSQLETDVSLRVENTDSPDAWIVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGV RCEPVERVQIDVPEEYTGSIMESMGARKGEMLDMVNNGNGQVRLTFMVPARGLIGYTTEFLTLTRGYGILNHTFDSYQPV HAGQVGGRRQGVLVSLETGKASQYGIMQVEDRGVIFVEPGTEVYTGMIVGEHTRENDLTVNIVKMKQQTNIRSATKDQTS TMKKPRIMTLEESLEYLNDDEYCEVTPESIRLRKKILDKNEREKAAKRKKSVEA
Specific function: Not known; probably interacts with the ribosomes in a GTP dependent manner [H]
COG id: COG1217
COG function: function code T; Predicted membrane GTPase involved in stress response
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. TypA subfamily [H]
Homologues:
Organism=Homo sapiens, GI157426893, Length=522, Percent_Identity=27.9693486590038, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=44.5255474452555, Blast_Score=128, Evalue=2e-29, Organism=Homo sapiens, GI4503483, Length=151, Percent_Identity=36.4238410596026, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI18390331, Length=177, Percent_Identity=35.5932203389831, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI19923640, Length=168, Percent_Identity=35.7142857142857, Blast_Score=99, Evalue=9e-21, Organism=Homo sapiens, GI25306283, Length=168, Percent_Identity=35.7142857142857, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI25306287, Length=168, Percent_Identity=35.7142857142857, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI34147630, Length=274, Percent_Identity=31.3868613138686, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI310132016, Length=115, Percent_Identity=41.7391304347826, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI310110807, Length=115, Percent_Identity=41.7391304347826, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI310123363, Length=115, Percent_Identity=41.7391304347826, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI217272892, Length=198, Percent_Identity=31.3131313131313, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI217272894, Length=198, Percent_Identity=31.3131313131313, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI94966752, Length=83, Percent_Identity=45.7831325301205, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI4503471, Length=311, Percent_Identity=27.3311897106109, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI53729339, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI53729337, Length=138, Percent_Identity=34.0579710144928, Blast_Score=70, Evalue=8e-12, Organism=Homo sapiens, GI4503475, Length=282, Percent_Identity=29.0780141843972, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI48994988, Length=605, Percent_Identity=54.7107438016529, Blast_Score=692, Evalue=0.0, Organism=Escherichia coli, GI1788922, Length=511, Percent_Identity=28.5714285714286, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1789738, Length=178, Percent_Identity=38.7640449438202, Blast_Score=101, Evalue=2e-22, Organism=Escherichia coli, GI1790835, Length=145, Percent_Identity=35.1724137931034, Blast_Score=94, Evalue=4e-20, Organism=Escherichia coli, GI1789737, Length=285, Percent_Identity=28.4210526315789, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1790412, Length=285, Percent_Identity=28.4210526315789, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17557151, Length=516, Percent_Identity=26.5503875968992, Blast_Score=129, Evalue=4e-30, Organism=Caenorhabditis elegans, GI17556745, Length=443, Percent_Identity=26.410835214447, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17533571, Length=175, Percent_Identity=38.2857142857143, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI17506493, Length=181, Percent_Identity=33.1491712707182, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71988811, Length=133, Percent_Identity=36.0902255639098, Blast_Score=99, Evalue=9e-21, Organism=Caenorhabditis elegans, GI71988819, Length=133, Percent_Identity=36.0902255639098, Blast_Score=99, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17552882, Length=134, Percent_Identity=37.3134328358209, Blast_Score=96, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17556456, Length=315, Percent_Identity=28.8888888888889, Blast_Score=96, Evalue=8e-20, Organism=Caenorhabditis elegans, GI25141371, Length=284, Percent_Identity=27.4647887323944, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI71994658, Length=143, Percent_Identity=33.5664335664336, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323320, Length=521, Percent_Identity=28.4069097888676, Blast_Score=159, Evalue=9e-40, Organism=Saccharomyces cerevisiae, GI6324707, Length=211, Percent_Identity=36.4928909952607, Blast_Score=120, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6320593, Length=211, Percent_Identity=36.4928909952607, Blast_Score=120, Evalue=7e-28, Organism=Saccharomyces cerevisiae, GI6324761, Length=276, Percent_Identity=30.7971014492754, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323098, Length=179, Percent_Identity=35.7541899441341, Blast_Score=101, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6324166, Length=180, Percent_Identity=34.4444444444444, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6322359, Length=148, Percent_Identity=35.1351351351351, Blast_Score=88, Evalue=5e-18, Organism=Saccharomyces cerevisiae, GI6324550, Length=201, Percent_Identity=32.3383084577114, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI78706572, Length=520, Percent_Identity=26.1538461538462, Blast_Score=135, Evalue=7e-32, Organism=Drosophila melanogaster, GI28574573, Length=142, Percent_Identity=42.2535211267606, Blast_Score=112, Evalue=9e-25, Organism=Drosophila melanogaster, GI24585709, Length=157, Percent_Identity=38.8535031847134, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24585711, Length=156, Percent_Identity=39.1025641025641, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI24585713, Length=156, Percent_Identity=39.1025641025641, Blast_Score=110, Evalue=4e-24, Organism=Drosophila melanogaster, GI281363316, Length=302, Percent_Identity=31.4569536423841, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI17864358, Length=302, Percent_Identity=31.4569536423841, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI24582462, Length=175, Percent_Identity=36.5714285714286, Blast_Score=107, Evalue=2e-23, Organism=Drosophila melanogaster, GI21357743, Length=188, Percent_Identity=36.7021276595745, Blast_Score=106, Evalue=5e-23, Organism=Drosophila melanogaster, GI221458488, Length=160, Percent_Identity=41.25, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921738, Length=279, Percent_Identity=29.3906810035842, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI28572034, Length=166, Percent_Identity=35.5421686746988, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR004161 - InterPro: IPR009000 - InterPro: IPR006298 [H]
Pfam domain/function: PF00679 EFG_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: NA
Molecular weight: Translated: 69099; Mature: 69099
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKKRQDLRNIAIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITIL CCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHCCEEEE AKNTAIHYGDKRINILDTPGHADFGGEVERIMRMVDGVLLVVDAYEGCMPQTRFVLKKAL EECCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH EQNLTPIVVVNKIDRDFARPEEVVDEVLDLFIELGANEDQLEFPVVFASAMNGTASLDPN HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCC PANQEENMKSLFETIINHIPAPIDNSDEPLQFQVALLDYNDYVGRIGVGRVFRGTMKVGQ CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCC QVALMKVDGSVKQFRVTKIFGYMGLKRQEIEEAKAGDLVAVSGMEDINVGETVCPIDHQE EEEEEEECCCHHHEEHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCEECCCCHHH ALPLLRIDEPTLQMTFLVNNSPFAGREGKYITSRKIEERLRSQLETDVSLRVENTDSPDA CCCEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCE WIVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGVRCEPVERVQIDVPEEYTGSI EEEECCCCEEEEEEEHHHHCCCCEEEECCCHHHEECCCCCCCCCCCEEEEECCHHHHHHH MESMGARKGEMLDMVNNGNGQVRLTFMVPARGLIGYTTEFLTLTRGYGILNHTFDSYQPV HHHHCCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC HAGQVGGRRQGVLVSLETGKASQYGIMQVEDRGVIFVEPGTEVYTGMIVGEHTRENDLTV CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCEE NIVKMKQQTNIRSATKDQTSTMKKPRIMTLEESLEYLNDDEYCEVTPESIRLRKKILDKN EEEEEEHHCCCHHCCCHHHHHHCCCEEEEHHHHHHHCCCCCCEEECHHHHHHHHHHHCCC EREKAAKRKKSVEA HHHHHHHHHHCCCC >Mature Secondary Structure MLKKRQDLRNIAIIAHVDHGKTTLVDQLLRQAGTFRANEHVEERAMDSNDLERERGITIL CCCCHHCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHCCEEEE AKNTAIHYGDKRINILDTPGHADFGGEVERIMRMVDGVLLVVDAYEGCMPQTRFVLKKAL EECCEEEECCCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH EQNLTPIVVVNKIDRDFARPEEVVDEVLDLFIELGANEDQLEFPVVFASAMNGTASLDPN HCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCC PANQEENMKSLFETIINHIPAPIDNSDEPLQFQVALLDYNDYVGRIGVGRVFRGTMKVGQ CCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHCC QVALMKVDGSVKQFRVTKIFGYMGLKRQEIEEAKAGDLVAVSGMEDINVGETVCPIDHQE EEEEEEECCCHHHEEHHHHHHHCCCCHHHHHHCCCCCEEEECCCCCCCCCCEECCCCHHH ALPLLRIDEPTLQMTFLVNNSPFAGREGKYITSRKIEERLRSQLETDVSLRVENTDSPDA CCCEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHCCCEEEEEECCCCCCE WIVSGRGELHLSILIENMRREGYELQVSKPEVIIKEIDGVRCEPVERVQIDVPEEYTGSI EEEECCCCEEEEEEEHHHHCCCCEEEECCCHHHEECCCCCCCCCCCEEEEECCHHHHHHH MESMGARKGEMLDMVNNGNGQVRLTFMVPARGLIGYTTEFLTLTRGYGILNHTFDSYQPV HHHHCCCCCCEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC HAGQVGGRRQGVLVSLETGKASQYGIMQVEDRGVIFVEPGTEVYTGMIVGEHTRENDLTV CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEECCCCCEEEEEEEECCCCCCCCEE NIVKMKQQTNIRSATKDQTSTMKKPRIMTLEESLEYLNDDEYCEVTPESIRLRKKILDKN EEEEEEHHCCCHHCCCHHHHHHCCCEEEEHHHHHHHCCCCCCEEECHHHHHHHHHHHCCC EREKAAKRKKSVEA HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]