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The map label for this gene is yqaJ [H]

Identifier: 152976331

GI number: 152976331

Start: 2711476

End: 2712411

Strand: Reverse

Name: yqaJ [H]

Synonym: Bcer98_2619

Alternate gene names: 152976331

Gene position: 2712411-2711476 (Counterclockwise)

Preceding gene: 152976332

Following gene: 152976330

Centisome position: 66.37

GC content: 37.61

Gene sequence:

>936_bases
ATGCAAGCGAAAGTTTTAATAAATACACTCAATATGGACCATAAACAGTGGTTGCAAGCACGAACACAAGGTATTGGCGG
TTCAGATGTTTCGGCTATCGTAGGTTTGAATAAATGGAAATCAGCAGTTCAAGTATTCCTTGAAAAAACACAAGTAATAA
AAAAAGAAGATGAACAAAGTGAAGCAGCGTACTTCGGAAATGTTTTGGAAGAAGTAGTGGCAAAAGAGTTCTCCAAACGT
ACGAATTTAAAGGTGCAACGTAGGAACGCAATCTTACAACATCCTGAATATCCGTGGATGCTTGCTAACGTGGACAGGCT
TATTGTTGGTGAACAAATTGGTCTTGAATGCAAAACAGCGTCGGAATATTTTAAAAAAGAATGGAAAGATGAGGAAGTTC
CAGACGCTTATCTTCTTCAATGCCAACATTATATGGCTGTAACTGGATACGAAGCATGGTGGATTGCGGTACTCATTGGT
GGAAACAAATTCGTGTACAAAAAGATCGAGCGAGATGAAGAAATCATTCAATACATCATCGATATTGAAAAAGACTTCTG
GCTCAATCATGTTGAGAAGAATGAACCACCGATGTTTGATGGAACAGAGGCATCCACCGAGCTACTTAAACACCTGTATC
CAAAATCAGTCGAAGACAGCTTTGTTAGCTTAGGAAGAGATGAAGAAATTCTGATTGAGGCTCGCAATCAAATTGATAAA
GAAATTAAAAGCTTGCAAGAACAGAAAGCAGAATATGAGAACAAACTTAAAGCGAAACTCGGCAAAAATGAAGCTGGTAG
AACTGAGAACTATACAATCTACTGGAAAACTTATAGCTACAAACGATTTGATAGCAAGAGATTTGCAAAAGAACATCCTG
AGTTATTTCAAAAGTATACAAAAGAAACGACTTCTCGTCGCTTCTCAGTTAAATAA

Upstream 100 bases:

>100_bases
GAAAACCGCTGGAGAATAAAAAAGGAAACCCACGGGTATGGGCTTCCTCGTTAAAAGATAAGTTGAAGTTAGTATACCAC
AGAAAGTGAGTGAATAAAAC

Downstream 100 bases:

>100_bases
GGGAGGAATAATTGATGAAGTTTCTTATTCAAGCAACAGTTTTTAATAAAGAGTTATTTGGTAAAGCAGTTTTTGTTGAA
GGACATGATGTCGATGGAGA

Product: YqaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MQAKVLINTLNMDHKQWLQARTQGIGGSDVSAIVGLNKWKSAVQVFLEKTQVIKKEDEQSEAAYFGNVLEEVVAKEFSKR
TNLKVQRRNAILQHPEYPWMLANVDRLIVGEQIGLECKTASEYFKKEWKDEEVPDAYLLQCQHYMAVTGYEAWWIAVLIG
GNKFVYKKIERDEEIIQYIIDIEKDFWLNHVEKNEPPMFDGTEASTELLKHLYPKSVEDSFVSLGRDEEILIEARNQIDK
EIKSLQEQKAEYENKLKAKLGKNEAGRTENYTIYWKTYSYKRFDSKRFAKEHPELFQKYTKETTSRRFSVK

Sequences:

>Translated_311_residues
MQAKVLINTLNMDHKQWLQARTQGIGGSDVSAIVGLNKWKSAVQVFLEKTQVIKKEDEQSEAAYFGNVLEEVVAKEFSKR
TNLKVQRRNAILQHPEYPWMLANVDRLIVGEQIGLECKTASEYFKKEWKDEEVPDAYLLQCQHYMAVTGYEAWWIAVLIG
GNKFVYKKIERDEEIIQYIIDIEKDFWLNHVEKNEPPMFDGTEASTELLKHLYPKSVEDSFVSLGRDEEILIEARNQIDK
EIKSLQEQKAEYENKLKAKLGKNEAGRTENYTIYWKTYSYKRFDSKRFAKEHPELFQKYTKETTSRRFSVK
>Mature_311_residues
MQAKVLINTLNMDHKQWLQARTQGIGGSDVSAIVGLNKWKSAVQVFLEKTQVIKKEDEQSEAAYFGNVLEEVVAKEFSKR
TNLKVQRRNAILQHPEYPWMLANVDRLIVGEQIGLECKTASEYFKKEWKDEEVPDAYLLQCQHYMAVTGYEAWWIAVLIG
GNKFVYKKIERDEEIIQYIIDIEKDFWLNHVEKNEPPMFDGTEASTELLKHLYPKSVEDSFVSLGRDEEILIEARNQIDK
EIKSLQEQKAEYENKLKAKLGKNEAGRTENYTIYWKTYSYKRFDSKRFAKEHPELFQKYTKETTSRRFSVK

Specific function: Unknown

COG id: COG5377

COG function: function code L; Phage-related protein, predicted endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011604
- InterPro:   IPR017482
- InterPro:   IPR011335
- InterPro:   IPR019080 [H]

Pfam domain/function: PF09588 YqaJ [H]

EC number: NA

Molecular weight: Translated: 36542; Mature: 36542

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAKVLINTLNMDHKQWLQARTQGIGGSDVSAIVGLNKWKSAVQVFLEKTQVIKKEDEQS
CCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EAAYFGNVLEEVVAKEFSKRTNLKVQRRNAILQHPEYPWMLANVDRLIVGEQIGLECKTA
HHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCCCCEEHHCCHHHHCCHHCCCEEHHH
SEYFKKEWKDEEVPDAYLLQCQHYMAVTGYEAWWIAVLIGGNKFVYKKIERDEEIIQYII
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHH
DIEKDFWLNHVEKNEPPMFDGTEASTELLKHLYPKSVEDSFVSLGRDEEILIEARNQIDK
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHH
EIKSLQEQKAEYENKLKAKLGKNEAGRTENYTIYWKTYSYKRFDSKRFAKEHPELFQKYT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHH
KETTSRRFSVK
HHHHCCCCCCC
>Mature Secondary Structure
MQAKVLINTLNMDHKQWLQARTQGIGGSDVSAIVGLNKWKSAVQVFLEKTQVIKKEDEQS
CCCEEEEEECCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
EAAYFGNVLEEVVAKEFSKRTNLKVQRRNAILQHPEYPWMLANVDRLIVGEQIGLECKTA
HHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHCCCCCCEEHHCCHHHHCCHHCCCEEHHH
SEYFKKEWKDEEVPDAYLLQCQHYMAVTGYEAWWIAVLIGGNKFVYKKIERDEEIIQYII
HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEHHHHHHHHHHHHHHH
DIEKDFWLNHVEKNEPPMFDGTEASTELLKHLYPKSVEDSFVSLGRDEEILIEARNQIDK
HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHH
EIKSLQEQKAEYENKLKAKLGKNEAGRTENYTIYWKTYSYKRFDSKRFAKEHPELFQKYT
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCCHHHHHHHH
KETTSRRFSVK
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704261; 8969508; 9384377; 7489895 [H]