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The map label for this gene is ymfN [H]

Identifier: 152976308

GI number: 152976308

Start: 2696997

End: 2698694

Strand: Reverse

Name: ymfN [H]

Synonym: Bcer98_2596

Alternate gene names: 152976308

Gene position: 2698694-2696997 (Counterclockwise)

Preceding gene: 152976309

Following gene: 152976307

Centisome position: 66.03

GC content: 35.75

Gene sequence:

>1698_bases
ATGAATTGGATAATAGAACGGGTTTTTGCCTACTGTGATGCAATTGTAAGTGGAAAAATAAAAAATTGTAAAAAACATAA
ATGGGCCGTTAAGCGTTTTTTAAAAGACTATGAGGATTGTCAAAAAGATGACAGTCTTTTTTATTTTGACGAAGAAATAG
TAGAAGATTTTTACTGGTTCGCAAGAGAGTTTAAGCATGTTGAAGGGATTTTAGCTGGCGAACCAGTAGAATTGACGGAT
TTTCAATTATTTTTATCGGCAAATATCTTTGGTTTTAAAAAGAAATCTAATGGAGCAAGACGCTTCAGAAAAGTTTTTAT
CCAATTAGCACGTAAAAATGCTAAATCACAATTTCTTGCTATTGTAGCAGCGTTTGTCACGTTTCTTGGTGATGAAAAAC
AACGTGCTTACATTGCTGGATGGACCAGAGATCAATCTTCTGAAGTTTACGAGGCTATAAAAACAGGAATCAGTTCAAGT
GAACTGTTAGAAGGTAAGTGGAAAGAAGCATATAGCACGATTGAAATATTTAAAAACGGCTCGGTGATTGTTCCTCTTTC
AAAAGAGGCAAGAAAAACAGGTGACGGAAAAAACCCATCTGTTGGGATTGTCGATGAGTATCATGCGCATGAGACTGACG
AAATTTACGATGTTCTATCTTCAGGGATGGTAGCAAGGAAAGAACCTTTGATGTTTATTATAACGACAGCTGGCTTTGAT
TTATCTAGACCTTGTTATAGAGAGTATGAATATGTCAGTGATATTCTAGATCCATCGAAAGATGTTGAAAACGATGATTA
TTTTGTTATGATTTGCGAACTGGAAAAAGATGATGACATAAAAGATGAGTCTAATTGGATAAAAGCAAACCCAATTGTCG
CTACTTATGAAGAAGGTATAGCAGCAATACGTTCGGATTTAAAAGTTGCTCTTGATAGACCTGAAAAAATGAGAGCATTT
TTAACCAAAAATATGAACATTTGGGTTGATAAAAAAGACAATGGATATATGGACATGTCAAAATGGCGCCAGTGCGAAGT
AGATAATATCGACTTTGTGGGAGCGACTCTCTGGATTGGCGGCGACCTATCTATGACTACTGACTTAACAAGTGTTGGTT
GGGTAGGGATGGACGAAGAGGGAGATTTTATTGTTGGACAACATTCTTTTATGCCAGAAGCCCGTTTAAAGGAGAAAATG
GCTACAGATAAGGTTCGTTATGATTTGTGGGCTGAACAAGGATATTTAACTTTAACACCTGGGGAAATGGTCGATTATAC
AATTGTTGAATCTTGGATAGAAAACTTTGCTAAAGATAAAGACATTCAAGAATTTGACTATGATAAATGGAATGCTTTGC
ATTTAGCGCAGAATTTAGAAAACAAAGGTTTTACTTGTGTAGAAATACCACAGCGGATTGCTAATCTATCCATTCCAACA
AAGACATTTCGTGAAAAAGTGTATGAAAAGAAAGTGAAACATACTGGTGATCCCGTGCTTTTTTGGGCTCTTAATAACGC
TGTTATTAAAATGGATGACCAAGAAAATATTATGATCTCGAAAAAGATAAGTAAAAATCGTATTGATCCAGCGGCAGCGG
TATTAAATGCATTTGCAAGGGCAATGTATGGGGCGAGTGTAAAAGTTGATGTGTCCGAATTCGCAAATAAAGACTTTCTT
AATAAATTATGGAACTAG

Upstream 100 bases:

>100_bases
TAGGATTAACGATTACATCTCGCTTAAAATTAGTTATTCCAGAATCGGATACATCACAGCAACAGCAAAGTGAAGCGCAA
CGTCGCTTTGGTGATCGTAT

Downstream 100 bases:

>100_bases
GGAGGGGGTGAGTGTGTGAAACTATTGGATTCAGTTCGAAAATTCTTCAGCTTTGAGAAAAGGCGAGTAGTTGAGTTAAA
TAAGGATGATGAAAAATTAT

Product: phage terminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MNWIIERVFAYCDAIVSGKIKNCKKHKWAVKRFLKDYEDCQKDDSLFYFDEEIVEDFYWFAREFKHVEGILAGEPVELTD
FQLFLSANIFGFKKKSNGARRFRKVFIQLARKNAKSQFLAIVAAFVTFLGDEKQRAYIAGWTRDQSSEVYEAIKTGISSS
ELLEGKWKEAYSTIEIFKNGSVIVPLSKEARKTGDGKNPSVGIVDEYHAHETDEIYDVLSSGMVARKEPLMFIITTAGFD
LSRPCYREYEYVSDILDPSKDVENDDYFVMICELEKDDDIKDESNWIKANPIVATYEEGIAAIRSDLKVALDRPEKMRAF
LTKNMNIWVDKKDNGYMDMSKWRQCEVDNIDFVGATLWIGGDLSMTTDLTSVGWVGMDEEGDFIVGQHSFMPEARLKEKM
ATDKVRYDLWAEQGYLTLTPGEMVDYTIVESWIENFAKDKDIQEFDYDKWNALHLAQNLENKGFTCVEIPQRIANLSIPT
KTFREKVYEKKVKHTGDPVLFWALNNAVIKMDDQENIMISKKISKNRIDPAAAVLNAFARAMYGASVKVDVSEFANKDFL
NKLWN

Sequences:

>Translated_565_residues
MNWIIERVFAYCDAIVSGKIKNCKKHKWAVKRFLKDYEDCQKDDSLFYFDEEIVEDFYWFAREFKHVEGILAGEPVELTD
FQLFLSANIFGFKKKSNGARRFRKVFIQLARKNAKSQFLAIVAAFVTFLGDEKQRAYIAGWTRDQSSEVYEAIKTGISSS
ELLEGKWKEAYSTIEIFKNGSVIVPLSKEARKTGDGKNPSVGIVDEYHAHETDEIYDVLSSGMVARKEPLMFIITTAGFD
LSRPCYREYEYVSDILDPSKDVENDDYFVMICELEKDDDIKDESNWIKANPIVATYEEGIAAIRSDLKVALDRPEKMRAF
LTKNMNIWVDKKDNGYMDMSKWRQCEVDNIDFVGATLWIGGDLSMTTDLTSVGWVGMDEEGDFIVGQHSFMPEARLKEKM
ATDKVRYDLWAEQGYLTLTPGEMVDYTIVESWIENFAKDKDIQEFDYDKWNALHLAQNLENKGFTCVEIPQRIANLSIPT
KTFREKVYEKKVKHTGDPVLFWALNNAVIKMDDQENIMISKKISKNRIDPAAAVLNAFARAMYGASVKVDVSEFANKDFL
NKLWN
>Mature_565_residues
MNWIIERVFAYCDAIVSGKIKNCKKHKWAVKRFLKDYEDCQKDDSLFYFDEEIVEDFYWFAREFKHVEGILAGEPVELTD
FQLFLSANIFGFKKKSNGARRFRKVFIQLARKNAKSQFLAIVAAFVTFLGDEKQRAYIAGWTRDQSSEVYEAIKTGISSS
ELLEGKWKEAYSTIEIFKNGSVIVPLSKEARKTGDGKNPSVGIVDEYHAHETDEIYDVLSSGMVARKEPLMFIITTAGFD
LSRPCYREYEYVSDILDPSKDVENDDYFVMICELEKDDDIKDESNWIKANPIVATYEEGIAAIRSDLKVALDRPEKMRAF
LTKNMNIWVDKKDNGYMDMSKWRQCEVDNIDFVGATLWIGGDLSMTTDLTSVGWVGMDEEGDFIVGQHSFMPEARLKEKM
ATDKVRYDLWAEQGYLTLTPGEMVDYTIVESWIENFAKDKDIQEFDYDKWNALHLAQNLENKGFTCVEIPQRIANLSIPT
KTFREKVYEKKVKHTGDPVLFWALNNAVIKMDDQENIMISKKISKNRIDPAAAVLNAFARAMYGASVKVDVSEFANKDFL
NKLWN

Specific function: Unknown

COG id: COG4626

COG function: function code R; Phage terminase-like protein, large subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phage terminase family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000524
- InterPro:   IPR005021
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00392 GntR; PF03354 Terminase_1 [H]

EC number: NA

Molecular weight: Translated: 65071; Mature: 65071

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWIIERVFAYCDAIVSGKIKNCKKHKWAVKRFLKDYEDCQKDDSLFYFDEEIVEDFYWF
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
AREFKHVEGILAGEPVELTDFQLFLSANIFGFKKKSNGARRFRKVFIQLARKNAKSQFLA
HHHHHHHHHHHCCCCCEEHHEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHH
IVAAFVTFLGDEKQRAYIAGWTRDQSSEVYEAIKTGISSSELLEGKWKEAYSTIEIFKNG
HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHEECCC
SVIVPLSKEARKTGDGKNPSVGIVDEYHAHETDEIYDVLSSGMVARKEPLMFIITTAGFD
CEEEECCHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCC
LSRPCYREYEYVSDILDPSKDVENDDYFVMICELEKDDDIKDESNWIKANPIVATYEEGI
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCEEEEHHHHH
AAIRSDLKVALDRPEKMRAFLTKNMNIWVDKKDNGYMDMSKWRQCEVDNIDFVGATLWIG
HHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEEC
GDLSMTTDLTSVGWVGMDEEGDFIVGQHSFMPEARLKEKMATDKVRYDLWAEQGYLTLTP
CCCEEECCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCEEEECC
GEMVDYTIVESWIENFAKDKDIQEFDYDKWNALHLAQNLENKGFTCVEIPQRIANLSIPT
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHCCCCCH
KTFREKVYEKKVKHTGDPVLFWALNNAVIKMDDQENIMISKKISKNRIDPAAAVLNAFAR
HHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCEEEEECHHCCCCCHHHHHHHHHHH
AMYGASVKVDVSEFANKDFLNKLWN
HHHCCCEEEEHHHHCCHHHHHHHCC
>Mature Secondary Structure
MNWIIERVFAYCDAIVSGKIKNCKKHKWAVKRFLKDYEDCQKDDSLFYFDEEIVEDFYWF
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
AREFKHVEGILAGEPVELTDFQLFLSANIFGFKKKSNGARRFRKVFIQLARKNAKSQFLA
HHHHHHHHHHHCCCCCEEHHEEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCHHHHHHH
IVAAFVTFLGDEKQRAYIAGWTRDQSSEVYEAIKTGISSSELLEGKWKEAYSTIEIFKNG
HHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHEECCC
SVIVPLSKEARKTGDGKNPSVGIVDEYHAHETDEIYDVLSSGMVARKEPLMFIITTAGFD
CEEEECCHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCC
LSRPCYREYEYVSDILDPSKDVENDDYFVMICELEKDDDIKDESNWIKANPIVATYEEGI
CCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEECCCEEEEHHHHH
AAIRSDLKVALDRPEKMRAFLTKNMNIWVDKKDNGYMDMSKWRQCEVDNIDFVGATLWIG
HHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCCCCCCCEEEEEEEEEC
GDLSMTTDLTSVGWVGMDEEGDFIVGQHSFMPEARLKEKMATDKVRYDLWAEQGYLTLTP
CCCEEECCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHEEEECCCEEEECC
GEMVDYTIVESWIENFAKDKDIQEFDYDKWNALHLAQNLENKGFTCVEIPQRIANLSIPT
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEHHHHHHHCCCCCH
KTFREKVYEKKVKHTGDPVLFWALNNAVIKMDDQENIMISKKISKNRIDPAAAVLNAFAR
HHHHHHHHHHHHHCCCCCEEEEEECCEEEEECCCCCEEEEECHHCCCCCHHHHHHHHHHH
AMYGASVKVDVSEFANKDFLNKLWN
HHHCCCEEEEHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]