Click here to switch to the map view.

The map label for this gene is sepF [H]

Identifier: 152976260

GI number: 152976260

Start: 2649183

End: 2649653

Strand: Reverse

Name: sepF [H]

Synonym: Bcer98_2548

Alternate gene names: 152976260

Gene position: 2649653-2649183 (Counterclockwise)

Preceding gene: 152976261

Following gene: 152976259

Centisome position: 64.83

GC content: 38.0

Gene sequence:

>471_bases
ATGAGTTGGTCAAAAGTGAAGTATTTCTTTTTTGACACGCCAGAGGAAAAAGAAGCAGCTCAATATGCTTACGAAAAGGA
GCAAATAGAAATGAAAAAACAGCAAGAACCTCCAGAACAACAAGACGTACCATTTACAAAAGTACAACCAAAACAAAATG
TCGTAAGCATTGAAACAGCAAAGCAATCTTCTAAAGTTGTTTTGTTAGAACCGCGTACGTATTCAGAAGCACAAGGGATT
GCAGACCATCTAAAAGGAAAGCGTGCTGTAGTCATTAATTTGCAAAGAATGTCTACCGATCAAGCAGTACGCATCGTTGA
CTTTTTAAGTGGTACTGTATACGCTATAGGCGGGGATATTCAAAAGTTAGGACCAAAAACATTTATGTGTACACCTGAGA
ATGTGGATATTGTTGGAGCAATTTCCGAGTTATTCGGTGAAGAGGAAGAGACAAATATAAAGAGGTGGTAA

Upstream 100 bases:

>100_bases
AATGTCGAATGATTATACAATTGCGATTGAAGAAGGTGCTACATATATTCGTTTGGGAACGATTTTAGTAGGAAAAGCAT
AAAAGGAAGGAGAATGTATT

Downstream 100 bases:

>100_bases
TACGCCATGTTTATAATTTTAAAAGCTTTGCTCTTAGTCATTCAAATTTACTCCTGGGCGCTTATTGTCTACATTCTTCT
AACTTGGTTTCCAGGCGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSWSKVKYFFFDTPEEKEAAQYAYEKEQIEMKKQQEPPEQQDVPFTKVQPKQNVVSIETAKQSSKVVLLEPRTYSEAQGI
ADHLKGKRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDIQKLGPKTFMCTPENVDIVGAISELFGEEEETNIKRW

Sequences:

>Translated_156_residues
MSWSKVKYFFFDTPEEKEAAQYAYEKEQIEMKKQQEPPEQQDVPFTKVQPKQNVVSIETAKQSSKVVLLEPRTYSEAQGI
ADHLKGKRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDIQKLGPKTFMCTPENVDIVGAISELFGEEEETNIKRW
>Mature_155_residues
SWSKVKYFFFDTPEEKEAAQYAYEKEQIEMKKQQEPPEQQDVPFTKVQPKQNVVSIETAKQSSKVVLLEPRTYSEAQGIA
DHLKGKRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDIQKLGPKTFMCTPENVDIVGAISELFGEEEETNIKRW

Specific function: Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of ftsZ protofilaments. Its function overlaps with ftsA [H]

COG id: COG1799

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm. Note=Localizes to the division site, in a ftsZ-dependent manner (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sepF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023052
- InterPro:   IPR007561 [H]

Pfam domain/function: PF04472 DUF552 [H]

EC number: NA

Molecular weight: Translated: 17777; Mature: 17646

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSKVKYFFFDTPEEKEAAQYAYEKEQIEMKKQQEPPEQQDVPFTKVQPKQNVVSIETA
CCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEEC
KQSSKVVLLEPRTYSEAQGIADHLKGKRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDI
CCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEECCCH
QKLGPKTFMCTPENVDIVGAISELFGEEEETNIKRW
HHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SWSKVKYFFFDTPEEKEAAQYAYEKEQIEMKKQQEPPEQQDVPFTKVQPKQNVVSIETA
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEEC
KQSSKVVLLEPRTYSEAQGIADHLKGKRAVVINLQRMSTDQAVRIVDFLSGTVYAIGGDI
CCCCCEEEECCCCCCHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHCCEEEEECCCH
QKLGPKTFMCTPENVDIVGAISELFGEEEETNIKRW
HHCCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA