Click here to switch to the map view.

The map label for this gene is pyrK [H]

Identifier: 152976246

GI number: 152976246

Start: 2632814

End: 2633593

Strand: Reverse

Name: pyrK [H]

Synonym: Bcer98_2534

Alternate gene names: 152976246

Gene position: 2633593-2632814 (Counterclockwise)

Preceding gene: 152976247

Following gene: 152976245

Centisome position: 64.44

GC content: 40.64

Gene sequence:

>780_bases
ATGATGCAAAAGCAAAATATGATCGTCGTTAACCAAACAGAAATCGCAAAAAACATTTATGAATTAGTGCTTCAAGGTGA
TCTTGTACAGCAAATGAACGAACCAGGGCAGTTCGTACACATTAAGGTAGCAGAGGGGATTACCCCCCTTCTGCGCCGCC
CAATTAGCATTTGTAATGTCGATCAAGAAAAAAACGAATTTACAATGCTATATCGTGCGGAAGGACAAGGAACAAAAACA
TTAGCAAAAAGAAAACAAGGTGAATTAGTAGATGTATTAGGACCACTCGGACATGGATTTCCGGTAGAAGAAGCAGAAGC
TGGACAAACAGCTCTATTAGTAGGAGGCGGAATTGGTGTGCCACCACTTTATGAGCTATCGCAACGCCTTGTTGCAAAAG
GGGTACGTGTTATTCACATCTTAGGATTTCAAACGAAAGATGTTGTTTTCTATGAAGAAAAGTTTGCAGAACTTGGTGAT
ACGTATGTTGCAACCGTTGATGGTACACATGGTACAAAAGGGTTTGTAACAGATGTAATAGATAACTATGGAATTGACTT
TGATATTTTATACTCATGTGGACCTTTAGCAATGCTGCGTGCATTAGAAGGGCGTTATAAAGAGAAAAAAGCCTACATTT
CACTAGAAGAACGTATGGGATGCGGGATTGGAGCATGTTTCGCGTGCGTATGTCACTTACAAGAAGATCCAAGCGGACAT
TCTTATAAAAAAGTGTGCAGCGATGGACCTGTGTTTCCAATCGGGGAGGTTGTACTATGA

Upstream 100 bases:

>100_bases
ATACAACAAGAGCAATTTTACGAGTACTAGAATCTATGACGTTCTCAGCTCACACAATGAAAGAAATCGCGCCAACAACG
CGTCACGAGGTGGTACATGC

Downstream 100 bases:

>100_bases
ACAGATTACAAGTTGAATTACCAGGATTATCATTAAAAAATCCAATCATCCCAGCATCTGGTTGCTTCGGATTTGGTCGT
GAATATGCTCAGTTTTATGA

Product: dihydroorotate dehydrogenase electron transfer subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MMQKQNMIVVNQTEIAKNIYELVLQGDLVQQMNEPGQFVHIKVAEGITPLLRRPISICNVDQEKNEFTMLYRAEGQGTKT
LAKRKQGELVDVLGPLGHGFPVEEAEAGQTALLVGGGIGVPPLYELSQRLVAKGVRVIHILGFQTKDVVFYEEKFAELGD
TYVATVDGTHGTKGFVTDVIDNYGIDFDILYSCGPLAMLRALEGRYKEKKAYISLEERMGCGIGACFACVCHLQEDPSGH
SYKKVCSDGPVFPIGEVVL

Sequences:

>Translated_259_residues
MMQKQNMIVVNQTEIAKNIYELVLQGDLVQQMNEPGQFVHIKVAEGITPLLRRPISICNVDQEKNEFTMLYRAEGQGTKT
LAKRKQGELVDVLGPLGHGFPVEEAEAGQTALLVGGGIGVPPLYELSQRLVAKGVRVIHILGFQTKDVVFYEEKFAELGD
TYVATVDGTHGTKGFVTDVIDNYGIDFDILYSCGPLAMLRALEGRYKEKKAYISLEERMGCGIGACFACVCHLQEDPSGH
SYKKVCSDGPVFPIGEVVL
>Mature_259_residues
MMQKQNMIVVNQTEIAKNIYELVLQGDLVQQMNEPGQFVHIKVAEGITPLLRRPISICNVDQEKNEFTMLYRAEGQGTKT
LAKRKQGELVDVLGPLGHGFPVEEAEAGQTALLVGGGIGVPPLYELSQRLVAKGVRVIHILGFQTKDVVFYEEKFAELGD
TYVATVDGTHGTKGFVTDVIDNYGIDFDILYSCGPLAMLRALEGRYKEKKAYISLEERMGCGIGACFACVCHLQEDPSGH
SYKKVCSDGPVFPIGEVVL

Specific function: Is responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the pyrD subunit to the ultimate electron acceptor NAD(+) [H]

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 28442; Mature: 28442

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMQKQNMIVVNQTEIAKNIYELVLQGDLVQQMNEPGQFVHIKVAEGITPLLRRPISICNV
CCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCHHHHHCCHHHCCC
DQEKNEFTMLYRAEGQGTKTLAKRKQGELVDVLGPLGHGFPVEEAEAGQTALLVGGGIGV
CCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC
PPLYELSQRLVAKGVRVIHILGFQTKDVVFYEEKFAELGDTYVATVDGTHGTKGFVTDVI
CHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
DNYGIDFDILYSCGPLAMLRALEGRYKEKKAYISLEERMGCGIGACFACVCHLQEDPSGH
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHCCCCCCC
SYKKVCSDGPVFPIGEVVL
HHHHHHCCCCCCCCHHHCC
>Mature Secondary Structure
MMQKQNMIVVNQTEIAKNIYELVLQGDLVQQMNEPGQFVHIKVAEGITPLLRRPISICNV
CCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEEECCCCHHHHHCCHHHCCC
DQEKNEFTMLYRAEGQGTKTLAKRKQGELVDVLGPLGHGFPVEEAEAGQTALLVGGGIGV
CCCCCCEEEEEEECCCCHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCC
PPLYELSQRLVAKGVRVIHILGFQTKDVVFYEEKFAELGDTYVATVDGTHGTKGFVTDVI
CHHHHHHHHHHHCCCEEEEEECCCCCCEEEHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
DNYGIDFDILYSCGPLAMLRALEGRYKEKKAYISLEERMGCGIGACFACVCHLQEDPSGH
HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEEHHHCCCCHHHHHHHHHHHCCCCCCC
SYKKVCSDGPVFPIGEVVL
HHHHHHCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA