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The map label for this gene is yloC [H]

Identifier: 152976239

GI number: 152976239

Start: 2623842

End: 2624717

Strand: Reverse

Name: yloC [H]

Synonym: Bcer98_2525

Alternate gene names: 152976239

Gene position: 2624717-2623842 (Counterclockwise)

Preceding gene: 152976240

Following gene: 152976238

Centisome position: 64.22

GC content: 36.53

Gene sequence:

>876_bases
ATGATTTCTAGTATGACAGGTTTTGGAAGGGCGAAAGTAGAAAAGGATGCCTTTCAAATTACAGTAGAAATGAAGTCAGT
GAACCATCGCTTTTTAGAGATGAACATTCGACTTCCGAAACAAATGATGGTTTTCGAAGATAAAATTCGTAAAATTATTG
CGGAGAAAGTTCGACGCGGACGTATTGAAGTGTCTATTAGTATTACTGGGGAAGGACTTGTAGAAAGAAAATTAAGTGTG
AATTGGTCGCTTCTCGATCAATATAAATCCATTATGGAAGATGTAAAAATGAAATTTCAATTACAGGATTCTATTACCCT
ACAACAATTAATGACAATGCCAGAAGTAACGGCGATTGAAGAAGTGGAAAATGTAAATGAACAATTTGAGCATAGTTTAT
ATGAGGCTGTTCGCCAAGCTACGCATATGTTAAAAACAATGAGAGACGGCGAAGGAGAACGATTACATAAAGATATAGCA
CATCGTTTACAAGAGATTCACAATTGTGTGAATGCAATTATTCCGCACGCACCAATTGTTGTTCAAAGATATCGTGAACG
ATTAGAAAATCGCTTAAAAGAAATACATAGCCAAGATTTAGAGGAACAACGAGTGCTTACAGAAGTGGCAATGTTTGCAG
AGCGCTCGGATATTCATGAAGAATTAGTCAGATTGCAAAGTCACTTAGACCAATTTCGCGAGGCACTCGAACTACAGGAG
CCTGTTGGCAGAAAAATGGACTTCATTGTACAGGAAATGCACCGGGAAATTAATACAATTGGTTCTAAGGCAAACGACTT
AACGATTTCAAAATATGTCGTGGAAATGAAAAATAACCTTGAAAAAATTCGTGAACAGGTACAAAATATTGAATAG

Upstream 100 bases:

>100_bases
GTCAATGAAATGAAAATGTGATATAATTTACAAAAGGTAGTAGAGTGATATCTCTATTACCTTTTTCATTGAGTTATTTC
ATGGCTTGGATGTGATAAAG

Downstream 100 bases:

>100_bases
CTGTCAAAAAAGATATAAAGTTATACGTGGTAGAGAAATCGGATAGACTTACGAGGAGGCACAAATTATGGCCATGCGAT
TTTTAAATATTGGATATGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MISSMTGFGRAKVEKDAFQITVEMKSVNHRFLEMNIRLPKQMMVFEDKIRKIIAEKVRRGRIEVSISITGEGLVERKLSV
NWSLLDQYKSIMEDVKMKFQLQDSITLQQLMTMPEVTAIEEVENVNEQFEHSLYEAVRQATHMLKTMRDGEGERLHKDIA
HRLQEIHNCVNAIIPHAPIVVQRYRERLENRLKEIHSQDLEEQRVLTEVAMFAERSDIHEELVRLQSHLDQFREALELQE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE

Sequences:

>Translated_291_residues
MISSMTGFGRAKVEKDAFQITVEMKSVNHRFLEMNIRLPKQMMVFEDKIRKIIAEKVRRGRIEVSISITGEGLVERKLSV
NWSLLDQYKSIMEDVKMKFQLQDSITLQQLMTMPEVTAIEEVENVNEQFEHSLYEAVRQATHMLKTMRDGEGERLHKDIA
HRLQEIHNCVNAIIPHAPIVVQRYRERLENRLKEIHSQDLEEQRVLTEVAMFAERSDIHEELVRLQSHLDQFREALELQE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
>Mature_291_residues
MISSMTGFGRAKVEKDAFQITVEMKSVNHRFLEMNIRLPKQMMVFEDKIRKIIAEKVRRGRIEVSISITGEGLVERKLSV
NWSLLDQYKSIMEDVKMKFQLQDSITLQQLMTMPEVTAIEEVENVNEQFEHSLYEAVRQATHMLKTMRDGEGERLHKDIA
HRLQEIHNCVNAIIPHAPIVVQRYRERLENRLKEIHSQDLEEQRVLTEVAMFAERSDIHEELVRLQSHLDQFREALELQE
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE

Specific function: Unknown

COG id: COG1561

COG function: function code S; Uncharacterized stress-induced protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0701 family [H]

Homologues:

Organism=Escherichia coli, GI1790075, Length=294, Percent_Identity=31.9727891156463, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005229
- InterPro:   IPR013551
- InterPro:   IPR013527 [H]

Pfam domain/function: PF08340 DUF1732; PF03755 YicC_N [H]

EC number: NA

Molecular weight: Translated: 34262; Mature: 34262

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS00867 CPSASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSMTGFGRAKVEKDAFQITVEMKSVNHRFLEMNIRLPKQMMVFEDKIRKIIAEKVRRG
CCCCCCCCCHHHCCHHHHEEEEEHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCC
RIEVSISITGEGLVERKLSVNWSLLDQYKSIMEDVKMKFQLQDSITLQQLMTMPEVTAIE
CEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EVENVNEQFEHSLYEAVRQATHMLKTMRDGEGERLHKDIAHRLQEIHNCVNAIIPHAPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VQRYRERLENRLKEIHSQDLEEQRVLTEVAMFAERSDIHEELVRLQSHLDQFREALELQE
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
HHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISSMTGFGRAKVEKDAFQITVEMKSVNHRFLEMNIRLPKQMMVFEDKIRKIIAEKVRRG
CCCCCCCCCHHHCCHHHHEEEEEHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHCC
RIEVSISITGEGLVERKLSVNWSLLDQYKSIMEDVKMKFQLQDSITLQQLMTMPEVTAIE
CEEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
EVENVNEQFEHSLYEAVRQATHMLKTMRDGEGERLHKDIAHRLQEIHNCVNAIIPHAPIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
VQRYRERLENRLKEIHSQDLEEQRVLTEVAMFAERSDIHEELVRLQSHLDQFREALELQE
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVGRKMDFIVQEMHREINTIGSKANDLTISKYVVEMKNNLEKIREQVQNIE
HHCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]