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The map label for this gene is rimP [H]

Identifier: 152976183

GI number: 152976183

Start: 2563318

End: 2563788

Strand: Reverse

Name: rimP [H]

Synonym: Bcer98_2469

Alternate gene names: 152976183

Gene position: 2563788-2563318 (Counterclockwise)

Preceding gene: 152976184

Following gene: 152976182

Centisome position: 62.73

GC content: 38.64

Gene sequence:

>471_bases
ATGGATAAGAAAGTTACAGAAGTTGTTGAAGCACTTGCGCAGCCGATTGTTGAAGAGTTAAATCTTGAACTTGTAGATGT
AGAATATGTGAAAGAAGGGAAAGACTGGTTCCTACGCGTATTCATCGATTCTGAAACCGGAGTCGACATTGAAGAATGCG
GTGCGGTAAGTGAACGTTTAAGTGAAGCTTTAGATAAAGAGGATCCAATTCCTCATCTGTACTTTTTGGATGTATCATCG
CCAGGAGCGGAACGCCCATTAAAGAAAGAAAAAGACTTCGAACAAGCGGTAGGAAGTCAAGTGGCAATTAAAACATACGA
GCCGATTGATGGTGAAAAGATGTTTGAAGGAAAATTGCTTTCTTATGATGGTACAACAATTACACTATTATTAACGATTA
AAACACGTAAAAAAGAAATCCAAATTCCAATGGATAAAGTTGCCAATGCGCGACTTGCAGTTACGTTTTAG

Upstream 100 bases:

>100_bases
GGGCTTTTGTTAGCTAACAAGAAAGAATAAGGCAGACCGCTTTATGATAAAGCGGGGCTTTTCTTTCAAATGGTACATGG
CGGCAGGAAGGAGGCTGTTT

Downstream 100 bases:

>100_bases
TTAGAAGGGGGATCCTCATGAGCACTGAGTTGTTAGATGCTTTGCTCGTATTAGAATCAGAAAAAGGTATTAGCAAAGAT
ATTATTATTGATGCGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSS
PGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF

Sequences:

>Translated_156_residues
MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSS
PGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
>Mature_156_residues
MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERLSEALDKEDPIPHLYFLDVSS
PGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLLSYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=129, Percent_Identity=37.2093023255814, Blast_Score=90, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 17577; Mature: 17577

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERL
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHH
SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLL
HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCEECCCEEE
SYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
EECCCEEEEEEEEECCCCEEECCHHHHCCCEEEEEC
>Mature Secondary Structure
MDKKVTEVVEALAQPIVEELNLELVDVEYVKEGKDWFLRVFIDSETGVDIEECGAVSERL
CCHHHHHHHHHHHHHHHHHCCCEEEEHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHH
SEALDKEDPIPHLYFLDVSSPGAERPLKKEKDFEQAVGSQVAIKTYEPIDGEKMFEGKLL
HHHHCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCEECCCEEE
SYDGTTITLLLTIKTRKKEIQIPMDKVANARLAVTF
EECCCEEEEEEEEECCCCEEECCHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA