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The map label for this gene is yhdP [H]

Identifier: 152975878

GI number: 152975878

Start: 2234029

End: 2235351

Strand: Reverse

Name: yhdP [H]

Synonym: Bcer98_2138

Alternate gene names: 152975878

Gene position: 2235351-2234029 (Counterclockwise)

Preceding gene: 152975879

Following gene: 152975877

Centisome position: 54.69

GC content: 35.9

Gene sequence:

>1323_bases
TTGGAGATATTTAATTTAGTCATGGTTGCGATTTTAATCGCATTTACTGGATTTTTCGTAGCAGCGGAGTTTGCGATTGT
AAAAGTACGTTCAAGTCGCATTGATCAGCTTGTTGCGGAAGGCAAACGCGGTGCGCTAGCAGCAAAAAAAGTAACAACGA
ATTTAGATGAATATTTATCTGCTTGTCAACTAGGGATTACAGTTACAGCAATGGGACTTGGTTGGCTAGGTGAACCGACG
ATAGAAAAATTATTGCGTCCATTGTTTGAAAAGTGGAATTTAACCCCTTCCATTTCACATGTATTAACTTTTGGTCTTGC
GTTTATGATTATGACATATTTGCATGTTGTAGTTGGAGAGCTAGCTCCGAAAACAATGGCAATTCAAAAGGCTGAAAGGA
TCACTTTATTATTTGCTGGACCTTTAATGATATTTTATAAAGTGATGTATCCGTTTATTTGGATGCTAAATAGCTCTGCT
CGTGTTGTAACAGGCTTATTTGGCTTAAAACCAGCTTCTGAACATGACGTAGCACATACGGAAGAAGAATTACGTCTTAT
TCTTTCGGAGAGCTATGAAAGTGGAGAAATTAACCAAGCAGAATATAAATATGTAAATAACATTTTTGAATTCGATAACC
GCATTGCTAAAGAGATAATGGTGCCACGAACAGAGATTGTTGGCTTTTATCTTGAAGATTCAGTAGAAGAACACATGAAA
ATTATCCAAAATGAGCGATATACACGTTATCCAATCTTTGGAGAGGATAAAGATGATATTATCGGTATGGTTAACGTAAA
AGATTTCTTTATTCGATATATGAACAATGATACGAAAGATTTATCATCCATTCGTGCGTATATGCGCCCAATTATTGAAG
TGATGGAAACAACTCCAATTCACGATTTACTTCTACAAATGCAGAAGAAGCGAATTCCGATGGCTGTATTATATGATGAG
TACGGAGGAACAGCTGGAATTGTAACGCTTGAAGATATATTAGAGGAAATTGTTGGGGAAATTCGTGATGAATATGATGA
AGATGAAGATCCGCCAATCCAACACGTAAATGAACATCATAAGATTGTGGATGGAAAAGTGTTGATTTCAGAAGTGAAAG
ATTTATTTGGTCTACACATTGAGGAAGAAGATGTAGATACAATTGGCGGTTGGATTATGATGCAAAATCATGAGATTGAA
GAAGGACAATGTGTGGAAGCAGAGAATTATGAATTTAAAGTGCTTGAAAAAGATTCTTATCAAATTAAGCGCATTGAAAT
TCGGAAAATTGATCAACAACAAGAACAAGCAGCAACTGTTTAG

Upstream 100 bases:

>100_bases
TTCTGTATAGCGCTATGTTTTCTAAAGAAAAGAAACGTAAATGAGAAAACATTATAGTATACAGGAGGTGAACACCTTAG
TTTTTTACTAAGGGGATTCA

Downstream 100 bases:

>100_bases
GTTGCTGCTTTCTTTCTGAATCAAAAGAAAAATAAAATTGATAACTAGGAGCGGATATTGTTGATTCAAATGGCATTGCG
CGTTTATCGATTGCAATTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 440; Mature: 440

Protein sequence:

>440_residues
MEIFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLSACQLGITVTAMGLGWLGEPT
IEKLLRPLFEKWNLTPSISHVLTFGLAFMIMTYLHVVVGELAPKTMAIQKAERITLLFAGPLMIFYKVMYPFIWMLNSSA
RVVTGLFGLKPASEHDVAHTEEELRLILSESYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMK
IIQNERYTRYPIFGEDKDDIIGMVNVKDFFIRYMNNDTKDLSSIRAYMRPIIEVMETTPIHDLLLQMQKKRIPMAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEDPPIQHVNEHHKIVDGKVLISEVKDLFGLHIEEEDVDTIGGWIMMQNHEIE
EGQCVEAENYEFKVLEKDSYQIKRIEIRKIDQQQEQAATV

Sequences:

>Translated_440_residues
MEIFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLSACQLGITVTAMGLGWLGEPT
IEKLLRPLFEKWNLTPSISHVLTFGLAFMIMTYLHVVVGELAPKTMAIQKAERITLLFAGPLMIFYKVMYPFIWMLNSSA
RVVTGLFGLKPASEHDVAHTEEELRLILSESYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMK
IIQNERYTRYPIFGEDKDDIIGMVNVKDFFIRYMNNDTKDLSSIRAYMRPIIEVMETTPIHDLLLQMQKKRIPMAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEDPPIQHVNEHHKIVDGKVLISEVKDLFGLHIEEEDVDTIGGWIMMQNHEIE
EGQCVEAENYEFKVLEKDSYQIKRIEIRKIDQQQEQAATV
>Mature_440_residues
MEIFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLSACQLGITVTAMGLGWLGEPT
IEKLLRPLFEKWNLTPSISHVLTFGLAFMIMTYLHVVVGELAPKTMAIQKAERITLLFAGPLMIFYKVMYPFIWMLNSSA
RVVTGLFGLKPASEHDVAHTEEELRLILSESYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMK
IIQNERYTRYPIFGEDKDDIIGMVNVKDFFIRYMNNDTKDLSSIRAYMRPIIEVMETTPIHDLLLQMQKKRIPMAVLYDE
YGGTAGIVTLEDILEEIVGEIRDEYDEDEDPPIQHVNEHHKIVDGKVLISEVKDLFGLHIEEEDVDTIGGWIMMQNHEIE
EGQCVEAENYEFKVLEKDSYQIKRIEIRKIDQQQEQAATV

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=396, Percent_Identity=47.979797979798, Blast_Score=381, Evalue=1e-106,
Organism=Escherichia coli, GI1790664, Length=432, Percent_Identity=23.1481481481481, Blast_Score=153, Evalue=2e-38,
Organism=Escherichia coli, GI145693175, Length=437, Percent_Identity=24.7139588100687, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI1786879, Length=255, Percent_Identity=30.1960784313725, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI87082033, Length=234, Percent_Identity=26.0683760683761, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1788119, Length=245, Percent_Identity=23.6734693877551, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 50512; Mature: 50512

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHH
ACQLGITVTAMGLGWLGEPTIEKLLRPLFEKWNLTPSISHVLTFGLAFMIMTYLHVVVGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAPKTMAIQKAERITLLFAGPLMIFYKVMYPFIWMLNSSARVVTGLFGLKPASEHDVAHT
HCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
EEELRLILSESYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IIQNERYTRYPIFGEDKDDIIGMVNVKDFFIRYMNNDTKDLSSIRAYMRPIIEVMETTPI
HHHCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
HDLLLQMQKKRIPMAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEDPPIQHVNEHH
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHH
KIVDGKVLISEVKDLFGLHIEEEDVDTIGGWIMMQNHEIEEGQCVEAENYEFKVLEKDSY
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCCEECCCCEEEEEECCCC
QIKRIEIRKIDQQQEQAATV
EEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEIFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHH
ACQLGITVTAMGLGWLGEPTIEKLLRPLFEKWNLTPSISHVLTFGLAFMIMTYLHVVVGE
HHHHCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LAPKTMAIQKAERITLLFAGPLMIFYKVMYPFIWMLNSSARVVTGLFGLKPASEHDVAHT
HCCHHHHHHHHHEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
EEELRLILSESYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMK
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
IIQNERYTRYPIFGEDKDDIIGMVNVKDFFIRYMNNDTKDLSSIRAYMRPIIEVMETTPI
HHHCCCCEECCCCCCCCCCEEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH
HDLLLQMQKKRIPMAVLYDEYGGTAGIVTLEDILEEIVGEIRDEYDEDEDPPIQHVNEHH
HHHHHHHHHHCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHCCHHH
KIVDGKVLISEVKDLFGLHIEEEDVDTIGGWIMMQNHEIEEGQCVEAENYEFKVLEKDSY
HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEECCCCCCCCCEECCCCEEEEEECCCC
QIKRIEIRKIDQQQEQAATV
EEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]