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The map label for this gene is ybgL [C]

Identifier: 152975804

GI number: 152975804

Start: 2162568

End: 2163326

Strand: Reverse

Name: ybgL [C]

Synonym: Bcer98_2060

Alternate gene names: 152975804

Gene position: 2163326-2162568 (Counterclockwise)

Preceding gene: 152975805

Following gene: 152975803

Centisome position: 52.93

GC content: 38.47

Gene sequence:

>759_bases
ATGATTTCTATTGATTTAAATTGTGATTTAGGAGAAGGATTTGGAGCATATCAAATTGGAAATGATGATGCCATTCTTCC
GTTTGTTTCATCTGTAAATATCGCATGTGGTTTTCATGCAGGTGATCCATCTATTATGCGACAAACAGTTGAAAAAGCAT
TGCAACATGATGTGGAGATAGGTGCTCACCCTGGTTTTCCGGATTTAATTGGATTCGGTAGAAGGATAATAGGAGTGTCA
CCAGATGAAGTATATAACTATGTTGTATATCAAATAGGGGCGTTAGATGGATTTGTAAGAGCGGCGGGAGGAAAGATGCA
TCATGTAAAACCACATGGCGCGCTCTATAATATGGCTGCTACTAACTTAGAAATTGCAGAAGCAATTGCAAGAGCCATTC
ATGATATAAATCCAAAGTTATATTTGTATGGCTTAGCCAATAGCGCATTTATACAAGCTGTAAAAAAATACGAATTACGT
CTTGTACAAGAAGCTTTTGCCGATCGTACCTATCAACCCGATGGGACATTAACGAGCCGTACCGAGAAGTATGCGCTGAT
TAAAAATGAAGAGACGGCAATCCATCAAGTGTTACAGATGGTACAAGAAGGTAAGATAAAGGCTATGGATGGAACGGTTA
TTACGATGCATCCACAAACGATTTGTTTGCATGGTGATGGTGAGAAAGCTGTGCAATTTGCGGAGAGAATATACAGAACA
TTTAGGCTAAATGGTATTTTTGTTTGTGCACCTAAATAA

Upstream 100 bases:

>100_bases
TTCCATGGAAGAAGCAGCGGCGCTTTACATAGAGCAAGAAAGAAATGTAAGGCTATTACAAAAGTTTATCAATCTACAAG
AATAGGAGAGGAAGAGAGGA

Downstream 100 bases:

>100_bases
TACAAGGAGATGATAGAGATGGTGAAGTTAATAGGGATATTGCTTGTTGCTGTAGGATTTTTATTTCGCTTAAATACATT
GCTAGTTGTTATGGTAGCAG

Product: LamB/YcsF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MISIDLNCDLGEGFGAYQIGNDDAILPFVSSVNIACGFHAGDPSIMRQTVEKALQHDVEIGAHPGFPDLIGFGRRIIGVS
PDEVYNYVVYQIGALDGFVRAAGGKMHHVKPHGALYNMAATNLEIAEAIARAIHDINPKLYLYGLANSAFIQAVKKYELR
LVQEAFADRTYQPDGTLTSRTEKYALIKNEETAIHQVLQMVQEGKIKAMDGTVITMHPQTICLHGDGEKAVQFAERIYRT
FRLNGIFVCAPK

Sequences:

>Translated_252_residues
MISIDLNCDLGEGFGAYQIGNDDAILPFVSSVNIACGFHAGDPSIMRQTVEKALQHDVEIGAHPGFPDLIGFGRRIIGVS
PDEVYNYVVYQIGALDGFVRAAGGKMHHVKPHGALYNMAATNLEIAEAIARAIHDINPKLYLYGLANSAFIQAVKKYELR
LVQEAFADRTYQPDGTLTSRTEKYALIKNEETAIHQVLQMVQEGKIKAMDGTVITMHPQTICLHGDGEKAVQFAERIYRT
FRLNGIFVCAPK
>Mature_252_residues
MISIDLNCDLGEGFGAYQIGNDDAILPFVSSVNIACGFHAGDPSIMRQTVEKALQHDVEIGAHPGFPDLIGFGRRIIGVS
PDEVYNYVVYQIGALDGFVRAAGGKMHHVKPHGALYNMAATNLEIAEAIARAIHDINPKLYLYGLANSAFIQAVKKYELR
LVQEAFADRTYQPDGTLTSRTEKYALIKNEETAIHQVLQMVQEGKIKAMDGTVITMHPQTICLHGDGEKAVQFAERIYRT
FRLNGIFVCAPK

Specific function: Unknown

COG id: COG1540

COG function: function code R; Uncharacterized proteins, homologs of lactam utilization protein B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0271 (lamB) family

Homologues:

Organism=Escherichia coli, GI1786931, Length=249, Percent_Identity=51.4056224899598, Blast_Score=255, Evalue=3e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2060_BACCN (A7GQB8)

Other databases:

- EMBL:   CP000764
- RefSeq:   YP_001375321.1
- ProteinModelPortal:   A7GQB8
- SMR:   A7GQB8
- STRING:   A7GQB8
- EnsemblBacteria:   EBBACT00000039066
- GeneID:   5343843
- GenomeReviews:   CP000764_GR
- KEGG:   bcy:Bcer98_2060
- eggNOG:   COG1540
- GeneTree:   EBGT00050000001139
- HOGENOM:   HBG482818
- OMA:   QTICLHG
- ProtClustDB:   PRK05406
- BioCyc:   BCER315749:BCER98_2060-MONOMER
- HAMAP:   MF_00691
- InterPro:   IPR011330
- InterPro:   IPR005501

Pfam domain/function: PF03746 LamB_YcsF; SSF88713 Glyco_hydro/deAcase_b/a-brl

EC number: NA

Molecular weight: Translated: 27737; Mature: 27737

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIDLNCDLGEGFGAYQIGNDDAILPFVSSVNIACGFHAGDPSIMRQTVEKALQHDVEI
CEEEEECCCCCCCCCEEEECCCCEEEEHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
GAHPGFPDLIGFGRRIIGVSPDEVYNYVVYQIGALDGFVRAAGGKMHHVKPHGALYNMAA
CCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHH
TNLEIAEAIARAIHDINPKLYLYGLANSAFIQAVKKYELRLVQEAFADRTYQPDGTLTSR
CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TEKYALIKNEETAIHQVLQMVQEGKIKAMDGTVITMHPQTICLHGDGEKAVQFAERIYRT
CCEEEEEECCHHHHHHHHHHHHCCCEEEECCEEEEECCCEEEEECCCHHHHHHHHHHHHH
FRLNGIFVCAPK
HCCCEEEEEECC
>Mature Secondary Structure
MISIDLNCDLGEGFGAYQIGNDDAILPFVSSVNIACGFHAGDPSIMRQTVEKALQHDVEI
CEEEEECCCCCCCCCEEEECCCCEEEEHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCC
GAHPGFPDLIGFGRRIIGVSPDEVYNYVVYQIGALDGFVRAAGGKMHHVKPHGALYNMAA
CCCCCCHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEHHHH
TNLEIAEAIARAIHDINPKLYLYGLANSAFIQAVKKYELRLVQEAFADRTYQPDGTLTSR
CCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TEKYALIKNEETAIHQVLQMVQEGKIKAMDGTVITMHPQTICLHGDGEKAVQFAERIYRT
CCEEEEEECCHHHHHHHHHHHHCCCEEEECCEEEEECCCEEEEECCCHHHHHHHHHHHHH
FRLNGIFVCAPK
HCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA