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The map label for this gene is ykpA [H]

Identifier: 152975764

GI number: 152975764

Start: 2114859

End: 2116484

Strand: Reverse

Name: ykpA [H]

Synonym: Bcer98_2013

Alternate gene names: 152975764

Gene position: 2116484-2114859 (Counterclockwise)

Preceding gene: 152975765

Following gene: 152975763

Centisome position: 51.79

GC content: 36.04

Gene sequence:

>1626_bases
ATGATTACAGTAAGTAACGTTAGTTTGCGTTTTGCGGATCGCAAATTGTTTGAAGATGTTAACATAAAATTCACGCCGGG
TAATTGCTACGGCTTAATTGGAGCAAATGGTGCTGGTAAATCAACATTTCTAAAGATTTTATCTGGAGAAATTGAGCCGA
CAACAGGGGATGTACATATTACGCCAGGTGAGCGTTTAGCAGTATTAAAACAGAACCACTTCGAATATGAAGAGTTTCCA
GTACTAGAAACAGTTATTATGGGTCACACTCGTTTATACGAAGTGATGCAAGAGAAAAATGCGATTTATATGAAAGAAGA
TTTCAGTGATGAAGATGGTATGCGCGCTGCAGAGCTTGAAGGTGAGTTTGCTGAACTTAACGGCTGGGAAGCGGAATCAG
AAGCTGCTATTCTTTTAAAAGGGCTTGGAATTGGTGAAGAGCTTCATGATAAGAAGATGTCTGAATTAACAGGTGCAGAG
AAAGTAAAAGTATTACTGGCGCAAGCGTTATTCGGTCAACCAGATGTTCTATTATTAGATGAGCCTACCAACCACTTAGA
TTTAAAAGCAATTCAATGGTTAGAAAACTTTTTAATGAACTTTGAAAATACGGTTATCGTTGTATCCCATGATCGTCATT
TCTTAAATAAAGTATGTACGCACATGGCTGACCTTGATTTCGGTAAAATTCAACTGTACGTTGGTAACTATGACTTCTGG
TATGAATCAAGTCAATTAGCGTTAAAATTAACGCAAGATGCAAATAAGAAAAAAGAAGAGAAAATAAAAGAGTTACAAAA
CTTTATTGCACGCTTTAGTTCAAATGCATCAAAAGCAAAGCAAGCAACTTCTCGTAAAAAATTATTAGATAAAATTACAT
TAGATGATATTAAACCATCATCACGCCGTTACCCATTCGTTGGTTTCACGCCAGAACGCGAAGTAGGAAATGACTTATTA
ACGGTTGAAGGTCTTTCAAAAACAATTGATGGAGAAAAAGTGTTAGATAATGTGTACTTCACTTTAAATAAAGGTGATAA
AGTTGCATTTATTGGACGTAACGATATTGCGATGACAACATTATTTAAAATTCTTATGGGTGAAATGGAGCCAGATAGCG
GTTCGTTCAAATGGGGTGTGACAACATCTCAATCGTACTTCCCAAGAGATAACTCTGCATACTTTGAAAACAGCGAATAT
AATCTAGTTGAATGGCTGCGCCAATTCTCACCACAAGATGAATCTGAAAGCTTCTTACGTGGCTTCTTAGGCCGTATGTT
ATTCTCTGGTGAAGAAGTGAAGAAGAATGTTTCTGTATTATCTGGGGGAGAAAAAGTACGTTGTATGTTATCAAAAATGA
TGCTAAGCGGTGCGAACGTATTGGTACTTGATGATCCAACGAACCATTTAGATCTTGAATCTATTACAGCATTAAACAAC
GGTTTAATCGCATTTAAAGGTACAATTTTATTTACATCTCATGACCATCAATTTGTACAAACAATTGCAAATCGTATTAT
TGAAGTCACACCAAATGGTGTAATCGATAAAGAAACGACTTACGATGAGTACTTAGAAAATGAAGAGCTACAAAAGCAAG
TAAGCGCAATGTACCAAAATAAATAA

Upstream 100 bases:

>100_bases
AGTTGACAATATACAAAGATGATTGGATATACCTTTAACATGTTAAATATGGTATAGTAAGTGGAGTATGTAATAAAAGT
ATCGAAATTGGAGGAACCAA

Downstream 100 bases:

>100_bases
ACGGATGAAATCCCCCCTTTACTAAGAAAGTATATAGGGGGGATTTTTTATTCCGCCATTTTAAGATAGTAACAGCCAGA
ATATAATCAGTGGAGGGCGA

Product: ABC transporter-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 541; Mature: 541

Protein sequence:

>541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPTTGDVHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTRLYEVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEELHDKKMSELTGAE
KVKVLLAQALFGQPDVLLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKIKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIKPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSAYFENSEY
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVLVLDDPTNHLDLESITALNN
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKETTYDEYLENEELQKQVSAMYQNK

Sequences:

>Translated_541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPTTGDVHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTRLYEVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEELHDKKMSELTGAE
KVKVLLAQALFGQPDVLLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKIKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIKPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSAYFENSEY
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVLVLDDPTNHLDLESITALNN
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKETTYDEYLENEELQKQVSAMYQNK
>Mature_541_residues
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPTTGDVHITPGERLAVLKQNHFEYEEFP
VLETVIMGHTRLYEVMQEKNAIYMKEDFSDEDGMRAAELEGEFAELNGWEAESEAAILLKGLGIGEELHDKKMSELTGAE
KVKVLLAQALFGQPDVLLLDEPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
YESSQLALKLTQDANKKKEEKIKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIKPSSRRYPFVGFTPEREVGNDLL
TVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTTLFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSAYFENSEY
NLVEWLRQFSPQDESESFLRGFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVLVLDDPTNHLDLESITALNN
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKETTYDEYLENEELQKQVSAMYQNK

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=538, Percent_Identity=30.2973977695167, Blast_Score=253, Evalue=3e-67,
Organism=Homo sapiens, GI10947137, Length=518, Percent_Identity=31.0810810810811, Blast_Score=226, Evalue=5e-59,
Organism=Homo sapiens, GI27881506, Length=518, Percent_Identity=31.0810810810811, Blast_Score=226, Evalue=6e-59,
Organism=Homo sapiens, GI10947135, Length=529, Percent_Identity=27.9773156899811, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI69354671, Length=529, Percent_Identity=27.9773156899811, Blast_Score=177, Evalue=3e-44,
Organism=Homo sapiens, GI45446740, Length=242, Percent_Identity=27.2727272727273, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI47078218, Length=242, Percent_Identity=27.2727272727273, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=30.3921568627451, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI21536376, Length=225, Percent_Identity=26.2222222222222, Blast_Score=77, Evalue=5e-14,
Organism=Homo sapiens, GI255708477, Length=210, Percent_Identity=27.1428571428571, Blast_Score=66, Evalue=7e-11,
Organism=Escherichia coli, GI1787041, Length=531, Percent_Identity=47.2693032015066, Blast_Score=533, Evalue=1e-152,
Organism=Escherichia coli, GI1789751, Length=507, Percent_Identity=34.1222879684418, Blast_Score=285, Evalue=5e-78,
Organism=Escherichia coli, GI2367384, Length=524, Percent_Identity=31.1068702290076, Blast_Score=242, Evalue=4e-65,
Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=29.5719844357977, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI1790525, Length=536, Percent_Identity=22.7611940298507, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1787029, Length=251, Percent_Identity=28.6852589641434, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI1786398, Length=261, Percent_Identity=25.6704980842912, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789864, Length=221, Percent_Identity=25.3393665158371, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1786703, Length=229, Percent_Identity=30.1310043668122, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=193, Percent_Identity=24.3523316062176, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081791, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=23.9043824701195, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786319, Length=223, Percent_Identity=22.4215246636771, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1787370, Length=226, Percent_Identity=24.7787610619469, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17553372, Length=545, Percent_Identity=29.3577981651376, Blast_Score=222, Evalue=4e-58,
Organism=Caenorhabditis elegans, GI17555318, Length=540, Percent_Identity=27.5925925925926, Blast_Score=207, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=25.5514705882353, Blast_Score=201, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17558664, Length=218, Percent_Identity=28.4403669724771, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17565938, Length=216, Percent_Identity=25.9259259259259, Blast_Score=68, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=524, Percent_Identity=33.0152671755725, Blast_Score=253, Evalue=7e-68,
Organism=Saccharomyces cerevisiae, GI6321121, Length=539, Percent_Identity=27.6437847866419, Blast_Score=199, Evalue=7e-52,
Organism=Saccharomyces cerevisiae, GI6325030, Length=375, Percent_Identity=25.3333333333333, Blast_Score=107, Evalue=7e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=423, Percent_Identity=23.8770685579196, Blast_Score=102, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6323278, Length=420, Percent_Identity=22.8571428571429, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24666836, Length=546, Percent_Identity=30.2197802197802, Blast_Score=249, Evalue=5e-66,
Organism=Drosophila melanogaster, GI24642252, Length=554, Percent_Identity=28.158844765343, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI18859989, Length=554, Percent_Identity=28.158844765343, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24641342, Length=517, Percent_Identity=29.0135396518375, Blast_Score=211, Evalue=9e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 61195; Mature: 61195

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPTTGDVHI
CEEEECEEEEEHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTRLYEVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEELHDKKMSELTGAEKVKVLLAQALFGQPDVLLLD
CCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKLTQDANKKKEEKIKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIKPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCCHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSAYFENSEYNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVLVLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKETTYDEYLENEELQKQVSAMYQN
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MITVSNVSLRFADRKLFEDVNIKFTPGNCYGLIGANGAGKSTFLKILSGEIEPTTGDVHI
CEEEECEEEEEHHHHHHCCCCEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCEEE
TPGERLAVLKQNHFEYEEFPVLETVIMGHTRLYEVMQEKNAIYMKEDFSDEDGMRAAELE
CCCCEEEEEECCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEHHCC
GEFAELNGWEAESEAAILLKGLGIGEELHDKKMSELTGAEKVKVLLAQALFGQPDVLLLD
CCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEE
EPTNHLDLKAIQWLENFLMNFENTVIVVSHDRHFLNKVCTHMADLDFGKIQLYVGNYDFW
CCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCEEEEEECCEEEE
YESSQLALKLTQDANKKKEEKIKELQNFIARFSSNASKAKQATSRKKLLDKITLDDIKPS
ECCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
SRRYPFVGFTPEREVGNDLLTVEGLSKTIDGEKVLDNVYFTLNKGDKVAFIGRNDIAMTT
CCCCCEECCCCCHHHCCCEEEECCCHHCCCHHHHHCCEEEEEECCCEEEEECCCCHHHHH
LFKILMGEMEPDSGSFKWGVTTSQSYFPRDNSAYFENSEYNLVEWLRQFSPQDESESFLR
HHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHH
GFLGRMLFSGEEVKKNVSVLSGGEKVRCMLSKMMLSGANVLVLDDPTNHLDLESITALNN
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHCC
GLIAFKGTILFTSHDHQFVQTIANRIIEVTPNGVIDKETTYDEYLENEELQKQVSAMYQN
CEEEEEEEEEEECCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]