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The map label for this gene is 152975676

Identifier: 152975676

GI number: 152975676

Start: 2024127

End: 2024810

Strand: Reverse

Name: 152975676

Synonym: Bcer98_1911

Alternate gene names: NA

Gene position: 2024810-2024127 (Counterclockwise)

Preceding gene: 152975679

Following gene: 152975675

Centisome position: 49.54

GC content: 33.33

Gene sequence:

>684_bases
TTGTGCACAAAAGTAATGCCATTGTTTAAAAATCCTATCGATATGGATTATTCAAATAAAAATTTTCTTATTGAGAATTA
TGCCGAATTAAAAAGATACTGCATGTTTTTAACAAAAAACAAATGGGATGGTGAAGACCTAGCGCAAGAAGCGGTTTGTA
AAGTACTGCAAAAATATAAGGAGGAAGATATTTGTATGACGCTTCTATATAAAATTGCGCGAAATCAATGGTTCGATCAA
TTAAAAGTAAAATCTGTTCAAGAGAAATTAGAGAAGGAAGTAACATTTGAAACACCACATGAAATAATTGCTGATTTGCA
TGAGATGGCGGAAAAAGTAGTCACTTCGCTAAATGCCCAGCAAGCTGTCATTTTTCTGTTAAAAGATGTCTTTCAATATC
ATCTATCTGATATTGCGAAAATATGCTCGATATCAGAAGGAGCAGTGAAAGCTTCGTTATTTCGGAGTAGAAATAAATTG
AAAATGAGAAATGAAGAAGATGGTAACTTAGCTTGGCAAGATGATGCCAAGGTAGTCGTAACAGCGGTTCGTGAACAAAA
ACCAGAATTATTAACAAAACTTCTTCCAACTATTCATTTTACACATGTATCTTCTAAAGAGCCGGTGCTATTGTTCAGTG
CGAAAAAATCTTCTTCTTACAATTTTATGTTATGTGCAGCTTAA

Upstream 100 bases:

>100_bases
CACATTGAAAAACATAAACCTTAAAAATTTTTTATTTCCTTCGTAACTTTTTTATCCCTTCAATCGTTCATTAAGTAAGC
GCTGAAAAGGAGTGGTTATT

Downstream 100 bases:

>100_bases
CAATAAGATGGAGGGATTATGATGAATACAATTCCATATGTTGTGGAACAAACAAAGTTAGGAGAACGCTCCTATGATAT
ATATTCTAGATTATTAAAAG

Product: RNA polymerase factor sigma-70

Products: NA

Alternate protein names: RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; DNA-Directed RNA Polymerase ECF-Type Sigma Factor; RNA Polymerase Ecf-Type Sigma Factor; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MCTKVMPLFKNPIDMDYSNKNFLIENYAELKRYCMFLTKNKWDGEDLAQEAVCKVLQKYKEEDICMTLLYKIARNQWFDQ
LKVKSVQEKLEKEVTFETPHEIIADLHEMAEKVVTSLNAQQAVIFLLKDVFQYHLSDIAKICSISEGAVKASLFRSRNKL
KMRNEEDGNLAWQDDAKVVVTAVREQKPELLTKLLPTIHFTHVSSKEPVLLFSAKKSSSYNFMLCAA

Sequences:

>Translated_227_residues
MCTKVMPLFKNPIDMDYSNKNFLIENYAELKRYCMFLTKNKWDGEDLAQEAVCKVLQKYKEEDICMTLLYKIARNQWFDQ
LKVKSVQEKLEKEVTFETPHEIIADLHEMAEKVVTSLNAQQAVIFLLKDVFQYHLSDIAKICSISEGAVKASLFRSRNKL
KMRNEEDGNLAWQDDAKVVVTAVREQKPELLTKLLPTIHFTHVSSKEPVLLFSAKKSSSYNFMLCAA
>Mature_227_residues
MCTKVMPLFKNPIDMDYSNKNFLIENYAELKRYCMFLTKNKWDGEDLAQEAVCKVLQKYKEEDICMTLLYKIARNQWFDQ
LKVKSVQEKLEKEVTFETPHEIIADLHEMAEKVVTSLNAQQAVIFLLKDVFQYHLSDIAKICSISEGAVKASLFRSRNKL
KMRNEEDGNLAWQDDAKVVVTAVREQKPELLTKLLPTIHFTHVSSKEPVLLFSAKKSSSYNFMLCAA

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26284; Mature: 26284

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCTKVMPLFKNPIDMDYSNKNFLIENYAELKRYCMFLTKNKWDGEDLAQEAVCKVLQKYK
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
EEDICMTLLYKIARNQWFDQLKVKSVQEKLEKEVTFETPHEIIADLHEMAEKVVTSLNAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH
QAVIFLLKDVFQYHLSDIAKICSISEGAVKASLFRSRNKLKMRNEEDGNLAWQDDAKVVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCCCCCEEECCCCHHHH
TAVREQKPELLTKLLPTIHFTHVSSKEPVLLFSAKKSSSYNFMLCAA
HHHHHCCHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCEEEEEC
>Mature Secondary Structure
MCTKVMPLFKNPIDMDYSNKNFLIENYAELKRYCMFLTKNKWDGEDLAQEAVCKVLQKYK
CCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
EEDICMTLLYKIARNQWFDQLKVKSVQEKLEKEVTFETPHEIIADLHEMAEKVVTSLNAQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHH
QAVIFLLKDVFQYHLSDIAKICSISEGAVKASLFRSRNKLKMRNEEDGNLAWQDDAKVVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCCCCCEEECCCCHHHH
TAVREQKPELLTKLLPTIHFTHVSSKEPVLLFSAKKSSSYNFMLCAA
HHHHHCCHHHHHHHHHHHHEEECCCCCCEEEEEECCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA