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The map label for this gene is lytR [H]

Identifier: 152975292

GI number: 152975292

Start: 1608118

End: 1609107

Strand: Direct

Name: lytR [H]

Synonym: Bcer98_1499

Alternate gene names: 152975292

Gene position: 1608118-1609107 (Clockwise)

Preceding gene: 152975291

Following gene: 152975293

Centisome position: 39.35

GC content: 32.42

Gene sequence:

>990_bases
ATGAGCTCTGAATTAGAACATCATAATACAAGAAGTAAACAGAGACGCTTTAAAAGAAAATCATTTAAATGGATCATTTT
CATTTCATTGTTTTTGCTTCTTTTGGGAGGCATTGGATATGGTTCTGTTATATATAATAAAGCGAAAGCAGTTGCAAATA
AAGCATATGAACAAATTGATAAATCAACGAAACGTGATAAGGAAGTTGAACCACTAAAGGATAACGTTTCAATTTTAATT
ATGGGTGTAGATGGTAGTGATGTAAGAGAAAGTCAGTATGGAGAAGCAGTTCGTACCGATGCGCTTTTATTGGCTACTAT
TAATAAAGATAATAAAACTGTGAAATTAGTAAGTATTCCACGTGATTCACGTGTATATATTCCATCAAGAAAGAAATTAG
ATAAAATTGCACATGCTCATGTATTTGGTGGTGTTGAAAGTACAAGAGATACTGTTGAACGATTTTTAGATGTTCCAGTA
GATTATTATGTGAAATTTAATTTTGATTCGTTTATGAGAATTGTTGATTCACTTGGAGGCATTGATGTGGATGTGCCTGT
AACGTTTACAGAACAAGACAGTAAAGACCAAGCAGGTATGATTCATTTAGAAAAAGGGTATCAACATTTAAATGGAGAAC
AAGCTCTCGCATTAGCGAGAACACGTAAAATTGATAGTGATGCAATGCGTGGGCAAAGACAACAACTTGTCATTGAAGCT
ATTGCGAAAAAAGCGTTTTCAGCTCAATCTATTAGTAAAATGAGTTCATTATTAACTGCAATTGATAATGGTATGAAAAC
GAATTTAACATTTGATGATATGCTTTCGATTGCAAAAAATATGGCTGAATCCGATTGGCAAATGGACAAAATACAAGTAG
AAGGGACAGATAAACGTATTCGTGGAATTTATTATTATATGCCAAATGAGAAAAATGTAAAAGAGATTTCGAAAACATTA
AATGAACACCTAGGCATTGCATCAAATTAA

Upstream 100 bases:

>100_bases
AAGTGAAACCTTACAAAAATGTAAGGTGAATGAAATGAATTTCAATAGGAAGTTTACTATACATGAAGTATACTAAAAAA
AGAAAGAGAGGAGAGTGAAC

Downstream 100 bases:

>100_bases
CTCAAAATTAGATGAAAAGGGTGGTATTTGCCATCCTTTTTTGTATCAGATTAATAACAGTTTACACTCTTCCTTAGGAT
TCAGAGAGAAACAAGAAAGG

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 329; Mature: 328

Protein sequence:

>329_residues
MSSELEHHNTRSKQRRFKRKSFKWIIFISLFLLLLGGIGYGSVIYNKAKAVANKAYEQIDKSTKRDKEVEPLKDNVSILI
MGVDGSDVRESQYGEAVRTDALLLATINKDNKTVKLVSIPRDSRVYIPSRKKLDKIAHAHVFGGVESTRDTVERFLDVPV
DYYVKFNFDSFMRIVDSLGGIDVDVPVTFTEQDSKDQAGMIHLEKGYQHLNGEQALALARTRKIDSDAMRGQRQQLVIEA
IAKKAFSAQSISKMSSLLTAIDNGMKTNLTFDDMLSIAKNMAESDWQMDKIQVEGTDKRIRGIYYYMPNEKNVKEISKTL
NEHLGIASN

Sequences:

>Translated_329_residues
MSSELEHHNTRSKQRRFKRKSFKWIIFISLFLLLLGGIGYGSVIYNKAKAVANKAYEQIDKSTKRDKEVEPLKDNVSILI
MGVDGSDVRESQYGEAVRTDALLLATINKDNKTVKLVSIPRDSRVYIPSRKKLDKIAHAHVFGGVESTRDTVERFLDVPV
DYYVKFNFDSFMRIVDSLGGIDVDVPVTFTEQDSKDQAGMIHLEKGYQHLNGEQALALARTRKIDSDAMRGQRQQLVIEA
IAKKAFSAQSISKMSSLLTAIDNGMKTNLTFDDMLSIAKNMAESDWQMDKIQVEGTDKRIRGIYYYMPNEKNVKEISKTL
NEHLGIASN
>Mature_328_residues
SSELEHHNTRSKQRRFKRKSFKWIIFISLFLLLLGGIGYGSVIYNKAKAVANKAYEQIDKSTKRDKEVEPLKDNVSILIM
GVDGSDVRESQYGEAVRTDALLLATINKDNKTVKLVSIPRDSRVYIPSRKKLDKIAHAHVFGGVESTRDTVERFLDVPVD
YYVKFNFDSFMRIVDSLGGIDVDVPVTFTEQDSKDQAGMIHLEKGYQHLNGEQALALARTRKIDSDAMRGQRQQLVIEAI
AKKAFSAQSISKMSSLLTAIDNGMKTNLTFDDMLSIAKNMAESDWQMDKIQVEGTDKRIRGIYYYMPNEKNVKEISKTLN
EHLGIASN

Specific function: Plays an attenuator role for both its own and lytABC operon expression, and thus regulates the expression of the major autolytic amidase of B.subtilis [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 37252; Mature: 37121

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSELEHHNTRSKQRRFKRKSFKWIIFISLFLLLLGGIGYGSVIYNKAKAVANKAYEQID
CCCCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KSTKRDKEVEPLKDNVSILIMGVDGSDVRESQYGEAVRTDALLLATINKDNKTVKLVSIP
HHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHCCEEEEEEECCCCCEEEEEECC
RDSRVYIPSRKKLDKIAHAHVFGGVESTRDTVERFLDVPVDYYVKFNFDSFMRIVDSLGG
CCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHCC
IDVDVPVTFTEQDSKDQAGMIHLEKGYQHLNGEQALALARTRKIDSDAMRGQRQQLVIEA
CEEEEEEEECCCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHH
IAKKAFSAQSISKMSSLLTAIDNGMKTNLTFDDMLSIAKNMAESDWQMDKIQVEGTDKRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
RGIYYYMPNEKNVKEISKTLNEHLGIASN
EEEEEEECCCCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SSELEHHNTRSKQRRFKRKSFKWIIFISLFLLLLGGIGYGSVIYNKAKAVANKAYEQID
CCCCHHHCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
KSTKRDKEVEPLKDNVSILIMGVDGSDVRESQYGEAVRTDALLLATINKDNKTVKLVSIP
HHHCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHCCEEEEEEECCCCCEEEEEECC
RDSRVYIPSRKKLDKIAHAHVFGGVESTRDTVERFLDVPVDYYVKFNFDSFMRIVDSLGG
CCCEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHCC
IDVDVPVTFTEQDSKDQAGMIHLEKGYQHLNGEQALALARTRKIDSDAMRGQRQQLVIEA
CEEEEEEEECCCCCCCCCCEEEEHHHHHHCCCHHHHHHHHHHCCCHHHHCCHHHHHHHHH
IAKKAFSAQSISKMSSLLTAIDNGMKTNLTFDDMLSIAKNMAESDWQMDKIQVEGTDKRI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCEE
RGIYYYMPNEKNVKEISKTLNEHLGIASN
EEEEEEECCCCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1357079; 9384377; 8126437 [H]