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The map label for this gene is ynbA [H]

Identifier: 152975231

GI number: 152975231

Start: 1533145

End: 1534404

Strand: Direct

Name: ynbA [H]

Synonym: Bcer98_1434

Alternate gene names: 152975231

Gene position: 1533145-1534404 (Clockwise)

Preceding gene: 152975230

Following gene: 152975232

Centisome position: 37.51

GC content: 34.29

Gene sequence:

>1260_bases
ATGGAAGAATTTGTACAAAGAGCAATATTAGTTGGTGTAAATTTAGGGCATGAAAGCGATTTTCAATATTCAATGGAGGA
ATTAGCAAATCTTGCAGAAGCATGTGATGTGGAAGTTGTCGGGCAAGTTACACAAAATTTACAACGTGTAAATCCTTCTC
ATTATATTGGAACAGGAAAGATTGGAGAAGTAGCAGCCTATGTGAAGGAAGTTGATGCGAATATTGTTATTTTCAATGAT
GAGCTATCTCCTTCGCAAATTCGAAATTTAGAAAAAGACTTAGACTGTAAAGTGATCGATCGTACGATTTTAATTTTAGA
TATTTTTGCCCAGCGTGCAAAAACGAAAGAAGCACAGCTACAAGTAGAAGTAGCTCATCTTCAATATATGATGCCCCGTT
TAGTCGGCCTTCGTGAATCGCTAGGAAGACAAAGTGGCGGTGTTGGTACGAAAAATAAAGGTGTCGGTGAGAAAAAGTTG
GAATTAGATCGCCGAAAAATTGAAGAGCAAATTTCGGTGTTGAATAAAGAATTAGAAGCACTTGTTGTACAGCGCAAAAC
GCAGCGAAAACAACGAAAGAAAAATGAAATTCCTGTTGTAGCATTAGTAGGATATACAAACGCGGGAAAATCTACGACGA
TGAATGCAATGCTTGAAATCTTTAATGGAACTATAGAGAAGCAAGTATTTGAAAAGGATATGTTATTTGCGACATTAGAA
ACGTCTGTTCGAAATATTGAGCTTCCGGATAATAAATCATTTTTATTAACAGATACAGTTGGATTTGTAAGTAAGTTACC
ACACCATCTTGTAAAGGCATTTCGTTCAACGTTAGAAGAAGTTGCAGAAGCAGACTTACTCATTCATGTTGTCGATTATT
CGAATCCAAATTATGAGCAATTAATTGAAATTACGAATCAAACATTAAAACAAATTGGAGTTGAAAACATTCCGACAATT
TATGCATATAATAAATCAGATATGATGGATGTGGAAATTCCAAAAACGAAGAAAGATCGCGTTTATTTATCTGCGAAAAA
ACAAATTGGTATGGAAGAATTAGTTGAAATGATTCGTTCACATATTTATAAAGAATATACAAAGTGTGAAATGTTAATCC
CGTATGATCAAGGGCAAATTGTTTCTTATTTCAATGAGTATGCACATGTTATATGTACGAGTTATGAAAATGAAGGTACG
AAACTTTCGCTGGAATGCAAAATAAGTGATTTTGAGAAGTATAAGCGTTTTGCTATTTGA

Upstream 100 bases:

>100_bases
CACGATATTCTTCTATTTGTCGTGTATCCTTGTCCGTTTATGAAAACACAGGCAGTGGCCTGTGTTTTTTAGTTTGCGTA
ATCGAAATGGAGGAACATGT

Downstream 100 bases:

>100_bases
AATAAAATATATTGAATGTATTTCAAATATTCACTTATATTAAAAGTAGTGTGAATAAAATGGAAAGAACGGAAGGGTGA
CCCAATTACATGAAGTATTA

Product: GTP-binding protein HSR1-related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MEEFVQRAILVGVNLGHESDFQYSMEELANLAEACDVEVVGQVTQNLQRVNPSHYIGTGKIGEVAAYVKEVDANIVIFND
ELSPSQIRNLEKDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLVGLRESLGRQSGGVGTKNKGVGEKKL
ELDRRKIEEQISVLNKELEALVVQRKTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLE
TSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIEITNQTLKQIGVENIPTI
YAYNKSDMMDVEIPKTKKDRVYLSAKKQIGMEELVEMIRSHIYKEYTKCEMLIPYDQGQIVSYFNEYAHVICTSYENEGT
KLSLECKISDFEKYKRFAI

Sequences:

>Translated_419_residues
MEEFVQRAILVGVNLGHESDFQYSMEELANLAEACDVEVVGQVTQNLQRVNPSHYIGTGKIGEVAAYVKEVDANIVIFND
ELSPSQIRNLEKDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLVGLRESLGRQSGGVGTKNKGVGEKKL
ELDRRKIEEQISVLNKELEALVVQRKTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLE
TSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIEITNQTLKQIGVENIPTI
YAYNKSDMMDVEIPKTKKDRVYLSAKKQIGMEELVEMIRSHIYKEYTKCEMLIPYDQGQIVSYFNEYAHVICTSYENEGT
KLSLECKISDFEKYKRFAI
>Mature_419_residues
MEEFVQRAILVGVNLGHESDFQYSMEELANLAEACDVEVVGQVTQNLQRVNPSHYIGTGKIGEVAAYVKEVDANIVIFND
ELSPSQIRNLEKDLDCKVIDRTILILDIFAQRAKTKEAQLQVEVAHLQYMMPRLVGLRESLGRQSGGVGTKNKGVGEKKL
ELDRRKIEEQISVLNKELEALVVQRKTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLE
TSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQLIEITNQTLKQIGVENIPTI
YAYNKSDMMDVEIPKTKKDRVYLSAKKQIGMEELVEMIRSHIYKEYTKCEMLIPYDQGQIVSYFNEYAHVICTSYENEGT
KLSLECKISDFEKYKRFAI

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310124269, Length=207, Percent_Identity=34.7826086956522, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310124267, Length=207, Percent_Identity=34.7826086956522, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310124171, Length=207, Percent_Identity=34.7826086956522, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310124169, Length=207, Percent_Identity=34.7826086956522, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI310133118, Length=230, Percent_Identity=33.4782608695652, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI310133116, Length=215, Percent_Identity=34.4186046511628, Blast_Score=119, Evalue=6e-27,
Organism=Escherichia coli, GI1790615, Length=415, Percent_Identity=37.5903614457831, Blast_Score=280, Evalue=1e-76,
Organism=Caenorhabditis elegans, GI17561038, Length=299, Percent_Identity=33.4448160535117, Blast_Score=137, Evalue=1e-32,
Organism=Drosophila melanogaster, GI24650079, Length=382, Percent_Identity=28.7958115183246, Blast_Score=125, Evalue=6e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 47804; Mature: 47804

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEFVQRAILVGVNLGHESDFQYSMEELANLAEACDVEVVGQVTQNLQRVNPSHYIGTGK
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCC
IGEVAAYVKEVDANIVIFNDELSPSQIRNLEKDLDCKVIDRTILILDIFAQRAKTKEAQL
HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
QVEVAHLQYMMPRLVGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKELEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVVQRKTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLE
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQ
HHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
LIEITNQTLKQIGVENIPTIYAYNKSDMMDVEIPKTKKDRVYLSAKKQIGMEELVEMIRS
HHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEHHHHCCHHHHHHHHHH
HIYKEYTKCEMLIPYDQGQIVSYFNEYAHVICTSYENEGTKLSLECKISDFEKYKRFAI
HHHHHHHHCEEEEECCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEECHHHHHHHCCC
>Mature Secondary Structure
MEEFVQRAILVGVNLGHESDFQYSMEELANLAEACDVEVVGQVTQNLQRVNPSHYIGTGK
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEECCCC
IGEVAAYVKEVDANIVIFNDELSPSQIRNLEKDLDCKVIDRTILILDIFAQRAKTKEAQL
HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
QVEVAHLQYMMPRLVGLRESLGRQSGGVGTKNKGVGEKKLELDRRKIEEQISVLNKELEA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVVQRKTQRKQRKKNEIPVVALVGYTNAGKSTTMNAMLEIFNGTIEKQVFEKDMLFATLE
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
TSVRNIELPDNKSFLLTDTVGFVSKLPHHLVKAFRSTLEEVAEADLLIHVVDYSNPNYEQ
HHHHEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHH
LIEITNQTLKQIGVENIPTIYAYNKSDMMDVEIPKTKKDRVYLSAKKQIGMEELVEMIRS
HHHHHHHHHHHCCCCCCCEEEEECCCCCEEEECCCCCCCEEEEEHHHHCCHHHHHHHHHH
HIYKEYTKCEMLIPYDQGQIVSYFNEYAHVICTSYENEGTKLSLECKISDFEKYKRFAI
HHHHHHHHCEEEEECCCCHHHHHHHHHHHEEEEEECCCCCEEEEEEEECHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]