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The map label for this gene is fliM [H]

Identifier: 152975177

GI number: 152975177

Start: 1479953

End: 1480939

Strand: Direct

Name: fliM [H]

Synonym: Bcer98_1378

Alternate gene names: 152975177

Gene position: 1479953-1480939 (Clockwise)

Preceding gene: 152975176

Following gene: 152975178

Centisome position: 36.21

GC content: 38.6

Gene sequence:

>987_bases
ATGAGTGGCGATAAATTAAGCCAAGAGCAAATTGATGCGCTGCTGAAGGCGATGAATGATGGGTCGGAGATGCCTGTTTT
CGCGCAAGAGGCAGATAAGAAAGAGAAATTTCAAGAATACGATTTTAATAGGCCAGAGAAATTTGGTGTGGAGCATTTAC
GAAGCTTACAAGCGATTGCAGCGAGTTTTGGAAAGCAAACGTCACAGTCGCTTGCAGCGCGGATGCGCATTCCAATTGAA
CTAGAGCCATCAACTGTAGAACAAGTTCCATTTACAAGTGAGTATGTGGAGAAAATGCCGAAAGATTATTATTTATATTG
CGTGATTGATCTTGGATTACCGGAGCTTGGGGAAATTGTAATTGAGATGGATCTTGCATTTATTATTTATATTCATGAAT
GTTGGCTTGGCGGGGATAGTAAGCGTGATTTTTCTATACGTAGACCGCTAACAGCGTTCGAGTTTTTAACACTTGATAAT
GTTTTCTCGATTCTTTGTAAAAATTTAGAGCAATCATTTGAAAGCATTGTAGCGATTCAGCCGAAGTTTGTGACGACGGA
GACGGATCCCAATGCATTAAAGATTACGACAGCGAGTGATATTATTTCCTTACTTAATGTGAATTTGAAAACAGAGTATT
GGAATACGACCGTTCGCATTGGGATTCCGTTCTTATCTGTTGAAGATATTATGGATAAGTTAACATCTGAAAATATTGTG
GAGCATTCTTCTGATAAGCGGAAAAAGTATACGTCAGAAGTAGAAGCAAAGGTTCATCAAGTGTATAAACCGATTCATAT
AGCGCTAGGTGAACAGAAGATGACAATTGGCGAGCTGGAGCAAATTGAAGAAGGTGATATTATCCCGCTTCATACGAAAG
TAACCGATCAATTGTGCGGATATGTTGACGGGAAACATAAGTTTAATTGCTTTATCGGAAAAGATAAAACGCGTAAAGCA
TTTTTGTTTAAAAGTTTTGTAGAATAG

Upstream 100 bases:

>100_bases
TGCTGGAGAATGAAGAGATTGGTACCGGGAAAATTTTGACGAAAAACGGAAAAATGTACGTTGAAATTGTTGAATTGAAA
GGATAGGGAAGGGGATTTTC

Downstream 100 bases:

>100_bases
GAGGGATTGTATGAAGCATGAAGTGTCACCTGTATCATTAATGAGTTTAGAAGAATACGCAATTCAGCGGGAGGAGCAAG
CGAAAGCACATATTGATACC

Product: flagellar motor switch protein FliM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSGDKLSQEQIDALLKAMNDGSEMPVFAQEADKKEKFQEYDFNRPEKFGVEHLRSLQAIAASFGKQTSQSLAARMRIPIE
LEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEMDLAFIIYIHECWLGGDSKRDFSIRRPLTAFEFLTLDN
VFSILCKNLEQSFESIVAIQPKFVTTETDPNALKITTASDIISLLNVNLKTEYWNTTVRIGIPFLSVEDIMDKLTSENIV
EHSSDKRKKYTSEVEAKVHQVYKPIHIALGEQKMTIGELEQIEEGDIIPLHTKVTDQLCGYVDGKHKFNCFIGKDKTRKA
FLFKSFVE

Sequences:

>Translated_328_residues
MSGDKLSQEQIDALLKAMNDGSEMPVFAQEADKKEKFQEYDFNRPEKFGVEHLRSLQAIAASFGKQTSQSLAARMRIPIE
LEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEMDLAFIIYIHECWLGGDSKRDFSIRRPLTAFEFLTLDN
VFSILCKNLEQSFESIVAIQPKFVTTETDPNALKITTASDIISLLNVNLKTEYWNTTVRIGIPFLSVEDIMDKLTSENIV
EHSSDKRKKYTSEVEAKVHQVYKPIHIALGEQKMTIGELEQIEEGDIIPLHTKVTDQLCGYVDGKHKFNCFIGKDKTRKA
FLFKSFVE
>Mature_327_residues
SGDKLSQEQIDALLKAMNDGSEMPVFAQEADKKEKFQEYDFNRPEKFGVEHLRSLQAIAASFGKQTSQSLAARMRIPIEL
EPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIVIEMDLAFIIYIHECWLGGDSKRDFSIRRPLTAFEFLTLDNV
FSILCKNLEQSFESIVAIQPKFVTTETDPNALKITTASDIISLLNVNLKTEYWNTTVRIGIPFLSVEDIMDKLTSENIVE
HSSDKRKKYTSEVEAKVHQVYKPIHIALGEQKMTIGELEQIEEGDIIPLHTKVTDQLCGYVDGKHKFNCFIGKDKTRKAF
LFKSFVE

Specific function: FliM is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the mot

COG id: COG1868

COG function: function code N; Flagellar motor switch protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliM family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001689
- InterPro:   IPR001543 [H]

Pfam domain/function: PF02154 FliM; PF01052 SpoA [H]

EC number: NA

Molecular weight: Translated: 37459; Mature: 37328

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDKLSQEQIDALLKAMNDGSEMPVFAQEADKKEKFQEYDFNRPEKFGVEHLRSLQAIA
CCCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ASFGKQTSQSLAARMRIPIELEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIV
HHHCCHHHHHHHHHHCCCEEECCCCHHHCCCCHHHHHHCCCCEEEEEEEECCCCHHHHHH
IEMDLAFIIYIHECWLGGDSKRDFSIRRPLTAFEFLTLDNVFSILCKNLEQSFESIVAIQ
HHHHHHHHEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PKFVTTETDPNALKITTASDIISLLNVNLKTEYWNTTVRIGIPFLSVEDIMDKLTSENIV
CEEEEECCCCCEEEEEEHHHHHHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHH
EHSSDKRKKYTSEVEAKVHQVYKPIHIALGEQKMTIGELEQIEEGDIIPLHTKVTDQLCG
HCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCEEEEEHHHHHHHHC
YVDGKHKFNCFIGKDKTRKAFLFKSFVE
CCCCCCEEEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SGDKLSQEQIDALLKAMNDGSEMPVFAQEADKKEKFQEYDFNRPEKFGVEHLRSLQAIA
CCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHH
ASFGKQTSQSLAARMRIPIELEPSTVEQVPFTSEYVEKMPKDYYLYCVIDLGLPELGEIV
HHHCCHHHHHHHHHHCCCEEECCCCHHHCCCCHHHHHHCCCCEEEEEEEECCCCHHHHHH
IEMDLAFIIYIHECWLGGDSKRDFSIRRPLTAFEFLTLDNVFSILCKNLEQSFESIVAIQ
HHHHHHHHEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEC
PKFVTTETDPNALKITTASDIISLLNVNLKTEYWNTTVRIGIPFLSVEDIMDKLTSENIV
CEEEEECCCCCEEEEEEHHHHHHHHHCCEEEEECCEEEEEECCCCCHHHHHHHHHHHHHH
EHSSDKRKKYTSEVEAKVHQVYKPIHIALGEQKMTIGELEQIEEGDIIPLHTKVTDQLCG
HCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHCCCCCEEEEEHHHHHHHHC
YVDGKHKFNCFIGKDKTRKAFLFKSFVE
CCCCCCEEEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8755894; 9665876; 8529894 [H]