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The map label for this gene is fliD [H]

Identifier: 152975152

GI number: 152975152

Start: 1455436

End: 1456782

Strand: Direct

Name: fliD [H]

Synonym: Bcer98_1353

Alternate gene names: 152975152

Gene position: 1455436-1456782 (Clockwise)

Preceding gene: 152975151

Following gene: 152975153

Centisome position: 35.61

GC content: 30.88

Gene sequence:

>1347_bases
ATGGGAGGAACAATCACCAATGTAGGTGGTAGACAGCAGATTTGGAATTTAGGGAATAACATAATTGATACCTCTAATTT
AGTAAATTTAGAACTGCAAGCTTTAGAAATGAAAAAAACGCCTTATGCAAATCAGAAACAAACACTCACTAATGAGAAAC
TTATTTATGCAAGTGTAAAAAAAGAATTTGGGAATTTTTATCAAATTTTTAAAGATTTATCTGCATTTAAAGGGAATGAA
AAGAAAACAGCAGCCTCTAAAGATGGATTTCTTACGGCCCAAGCGGATGCTTCAGCAATTGCAGGTACATATACGATTAC
AGTTGAAAAGGTTGCACAAAGACATCAAATTACTACGGCTCCAGCGAATTCAACAAATACAACAGGGACAATTCAGTTGG
ATGATAAAATTGGAAAAGACGATACATTTAAAATTGGTAGTAAAGATGTTACAGTTACAAAGGATATGACGTATAAAGAT
GTAGTTAACAAAATTAATAATGGAAACTATGGTGTGTCTGTATATTCTCTAGGGGGACATTTATTTTTTACATCAACTAC
AGAGGGTAAAGATGGCGAAATAAAATTAACTGATGGAAGTAATGGCTTTTTAAAGAGTATCGGATTAATAGATAGTACCG
GTGCAATCGCAAATGAGATTACAAAACCATCAGATGCGGAATACACAATAAATGGAATTGCTGGAACTAGTAAATCTAAT
AAAATTAGCACTCTTCCCGGTGTGACTATTAATTTAGAAAAAGAAACAACGGAACCAATTACTTTGACAATTCAAGATTC
TGATATAAAGGATTCTATTAATTTAATCAAAAAAATGAAAGATGAATATAATAAAGCTGTTTCAAGTTTAGATTTGTTTG
CAGGTAAAAATGGTGCTTTGCAAGGAAGTAGTGTGGCATTTTCGATTCAAAATGCTATGACAAATCTTTTTTCATATTCT
CAAGATAAAACATTTCTGTTCTCTTTTGGTATCGAAGTTGATAAAACAGGAATTATGAAATTAGATGAAGCGAAGTTGGC
AACTGCATTTAAAGAAAATCCAGAAACAACAAAACAATTTTTCTTTGGTTTAAATGGTTTAGGACATAATATGGAGAAAA
ACCTTGATAAGATATTTGGTGATGAAGGTTTTATTGGAAAGCGATCTAAAAGTATTGATGAGCAAGTAAGCAAATTAAAT
CAAAAAATTAGTGACATTGATACAATTAATAAAACGAAACAAATATCTATTATTGATAAGTATGCTAAGTTAGAATCTAC
ACTGGCTTTACTTGATATGCAGTTAAAAACTATGAAAGCTATGACAAAGCAAAAAAGTGATGATTAA

Upstream 100 bases:

>100_bases
TATATTAATGCAACGTATGAAGCGACATTAAAATCAGTAAGTACGATGAGTAAAATTAGTATTTTGGATTACATGTAATG
ATAAGAAGGAGTGGATATAA

Downstream 100 bases:

>100_bases
TGAAAATTGAGGAAGTGTTAGTATGCAAGCGTGGCAACGATATATGCAAAATGATATTATGACAAGTAATCCAATTAAAA
ATACAATCTTCATTTATGAA

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 448; Mature: 447

Protein sequence:

>448_residues
MGGTITNVGGRQQIWNLGNNIIDTSNLVNLELQALEMKKTPYANQKQTLTNEKLIYASVKKEFGNFYQIFKDLSAFKGNE
KKTAASKDGFLTAQADASAIAGTYTITVEKVAQRHQITTAPANSTNTTGTIQLDDKIGKDDTFKIGSKDVTVTKDMTYKD
VVNKINNGNYGVSVYSLGGHLFFTSTTEGKDGEIKLTDGSNGFLKSIGLIDSTGAIANEITKPSDAEYTINGIAGTSKSN
KISTLPGVTINLEKETTEPITLTIQDSDIKDSINLIKKMKDEYNKAVSSLDLFAGKNGALQGSSVAFSIQNAMTNLFSYS
QDKTFLFSFGIEVDKTGIMKLDEAKLATAFKENPETTKQFFFGLNGLGHNMEKNLDKIFGDEGFIGKRSKSIDEQVSKLN
QKISDIDTINKTKQISIIDKYAKLESTLALLDMQLKTMKAMTKQKSDD

Sequences:

>Translated_448_residues
MGGTITNVGGRQQIWNLGNNIIDTSNLVNLELQALEMKKTPYANQKQTLTNEKLIYASVKKEFGNFYQIFKDLSAFKGNE
KKTAASKDGFLTAQADASAIAGTYTITVEKVAQRHQITTAPANSTNTTGTIQLDDKIGKDDTFKIGSKDVTVTKDMTYKD
VVNKINNGNYGVSVYSLGGHLFFTSTTEGKDGEIKLTDGSNGFLKSIGLIDSTGAIANEITKPSDAEYTINGIAGTSKSN
KISTLPGVTINLEKETTEPITLTIQDSDIKDSINLIKKMKDEYNKAVSSLDLFAGKNGALQGSSVAFSIQNAMTNLFSYS
QDKTFLFSFGIEVDKTGIMKLDEAKLATAFKENPETTKQFFFGLNGLGHNMEKNLDKIFGDEGFIGKRSKSIDEQVSKLN
QKISDIDTINKTKQISIIDKYAKLESTLALLDMQLKTMKAMTKQKSDD
>Mature_447_residues
GGTITNVGGRQQIWNLGNNIIDTSNLVNLELQALEMKKTPYANQKQTLTNEKLIYASVKKEFGNFYQIFKDLSAFKGNEK
KTAASKDGFLTAQADASAIAGTYTITVEKVAQRHQITTAPANSTNTTGTIQLDDKIGKDDTFKIGSKDVTVTKDMTYKDV
VNKINNGNYGVSVYSLGGHLFFTSTTEGKDGEIKLTDGSNGFLKSIGLIDSTGAIANEITKPSDAEYTINGIAGTSKSNK
ISTLPGVTINLEKETTEPITLTIQDSDIKDSINLIKKMKDEYNKAVSSLDLFAGKNGALQGSSVAFSIQNAMTNLFSYSQ
DKTFLFSFGIEVDKTGIMKLDEAKLATAFKENPETTKQFFFGLNGLGHNMEKNLDKIFGDEGFIGKRSKSIDEQVSKLNQ
KISDIDTINKTKQISIIDKYAKLESTLALLDMQLKTMKAMTKQKSDD

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=411, Percent_Identity=27.007299270073, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 48954; Mature: 48823

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGTITNVGGRQQIWNLGNNIIDTSNLVNLELQALEMKKTPYANQKQTLTNEKLIYASVK
CCCCCCCCCCHHHHHHCCCCEECCCCEEEEEEEEEECCCCCCCCCHHHCCCCEEEEEHHH
KEFGNFYQIFKDLSAFKGNEKKTAASKDGFLTAQADASAIAGTYTITVEKVAQRHQITTA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHCEEEC
PANSTNTTGTIQLDDKIGKDDTFKIGSKDVTVTKDMTYKDVVNKINNGNYGVSVYSLGGH
CCCCCCCEEEEEECCCCCCCCCEEECCCCEEEECCCCHHHHHHHCCCCCCEEEEEEECCE
LFFTSTTEGKDGEIKLTDGSNGFLKSIGLIDSTGAIANEITKPSDAEYTINGIAGTSKSN
EEEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCC
KISTLPGVTINLEKETTEPITLTIQDSDIKDSINLIKKMKDEYNKAVSSLDLFAGKNGAL
CEEECCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGSSVAFSIQNAMTNLFSYSQDKTFLFSFGIEVDKTGIMKLDEAKLATAFKENPETTKQF
CCCCEEEEHHHHHHHHHHCCCCCEEEEEECCEECCCCCEEECHHHHHHHHHCCCHHHHHH
FFGLNGLGHNMEKNLDKIFGDEGFIGKRSKSIDEQVSKLNQKISDIDTINKTKQISIIDK
HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YAKLESTLALLDMQLKTMKAMTKQKSDD
HHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GGTITNVGGRQQIWNLGNNIIDTSNLVNLELQALEMKKTPYANQKQTLTNEKLIYASVK
CCCCCCCCCHHHHHHCCCCEECCCCEEEEEEEEEECCCCCCCCCHHHCCCCEEEEEHHH
KEFGNFYQIFKDLSAFKGNEKKTAASKDGFLTAQADASAIAGTYTITVEKVAQRHQITTA
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHHCEEEC
PANSTNTTGTIQLDDKIGKDDTFKIGSKDVTVTKDMTYKDVVNKINNGNYGVSVYSLGGH
CCCCCCCEEEEEECCCCCCCCCEEECCCCEEEECCCCHHHHHHHCCCCCCEEEEEEECCE
LFFTSTTEGKDGEIKLTDGSNGFLKSIGLIDSTGAIANEITKPSDAEYTINGIAGTSKSN
EEEEECCCCCCCEEEEECCCCCHHHHCCCCCCCCHHHHHCCCCCCCCEEEEEEECCCCCC
KISTLPGVTINLEKETTEPITLTIQDSDIKDSINLIKKMKDEYNKAVSSLDLFAGKNGAL
CEEECCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QGSSVAFSIQNAMTNLFSYSQDKTFLFSFGIEVDKTGIMKLDEAKLATAFKENPETTKQF
CCCCEEEEHHHHHHHHHHCCCCCEEEEEECCEECCCCCEEECHHHHHHHHHCCCHHHHHH
FFGLNGLGHNMEKNLDKIFGDEGFIGKRSKSIDEQVSKLNQKISDIDTINKTKQISIIDK
HHHCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHH
YAKLESTLALLDMQLKTMKAMTKQKSDD
HHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]