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The map label for this gene is gpsA

Identifier: 152975028

GI number: 152975028

Start: 1339599

End: 1340624

Strand: Direct

Name: gpsA

Synonym: Bcer98_1228

Alternate gene names: 152975028

Gene position: 1339599-1340624 (Clockwise)

Preceding gene: 152975027

Following gene: 152975029

Centisome position: 32.78

GC content: 41.81

Gene sequence:

>1026_bases
ATGACAAAAATCACAGTAATAGGAGCAGGTAGCTGGGGGACAGCGTTAGCGATGGTATTAGCTGACAATGGTCATGATGT
ACGAATTTGGGGGAATCGTCCTGAGCTTATGGATGAAATAAATACAAAGCACGAGAATAAACGATATCTTCCGGGGATTA
CATTGCCAAGCACAATCGTAGCCTACTCTTCTTTAGAAGAAGCGTTAGTGGATGTAAGTACGGTACTTTTAGTTGTACCA
ACGAAAGCGTACCGAGAAGTACTGCAAGATATGAAAAAAGTGATTTCAGGACCAATGACTTGGATTCATGCAAGTAAAGG
AATTGAACCTGGAACATCAAAACGAATTTCAGAGATGATTGAAGAAGAAATTCCAGAACATCTTATTCGAGATGTTGTTG
TGTTATCAGGGCCAAGCCATGCGGAGGAAGTTGCTCTTCGCCAAGCGACAACAGTTACTTCGGCTGCGAAGCGGATGGAA
GCAGCTGAAGAAGTACAAGATTTATTTATGAACCATTATTTTCGAGTATATACGAACCCGGATATTATCGGAGTAGAACT
TGGTGGAGCGTTAAAGAATATTATTGCGCTAGCTGCTGGGATTACAGATGGACTTGGGTTAGGTGATAATGCGAAGGCAG
CTTTAATGACACGCGGATTAACGGAAATTGCCCGTCTAGGAAGAAAGATGGGCGGGAATCCTTTAACATTTGCAGGCTTA
ACAGGAATGGGTGACTTAATTGTGACTTGTACAAGTGTGCATAGCCGCAACTGGCGAGCTGGAAATATGCTCGGTAAAGG
ACATTCTTTAGAGGAAGTACTCGATAGTATGGGAATGGTCGTTGAAGGGGTTAGAACGACAAAAGCTGCTTATGAATTAG
CAGAAAAAATGGAAGTTGAAATGCCAATTACAGCGGCTTTATATGATGTATTATTTAATGGGAAAAACGTGAAAGATGCA
GTTGGTTCATTAATGGGCCGTGTTCGTAAGCATGAAGTTGAAGCGATACCTGATTTATCTCGCTAA

Upstream 100 bases:

>100_bases
GCGTTTCTTGAAGAACCGTCTTCGCGAATCGTTCGGATTTGTAGGAACGCCAATTCGAATTATTGCTAGAGCAAGAGACT
AATGGAGAGGATGTGATTTT

Downstream 100 bases:

>100_bases
GTCTCTCGCTTCAAGAATGAGGAACAGTCCGATTGGTGAAGGTTAATAATCAGCGGGGACACTGATTCAAGTTCAAGTGT
CACTCTATCTTAAAAAAAGC

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTKITVIGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENKRYLPGITLPSTIVAYSSLEEALVDVSTVLLVVP
TKAYREVLQDMKKVISGPMTWIHASKGIEPGTSKRISEMIEEEIPEHLIRDVVVLSGPSHAEEVALRQATTVTSAAKRME
AAEEVQDLFMNHYFRVYTNPDIIGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLDSMGMVVEGVRTTKAAYELAEKMEVEMPITAALYDVLFNGKNVKDA
VGSLMGRVRKHEVEAIPDLSR

Sequences:

>Translated_341_residues
MTKITVIGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENKRYLPGITLPSTIVAYSSLEEALVDVSTVLLVVP
TKAYREVLQDMKKVISGPMTWIHASKGIEPGTSKRISEMIEEEIPEHLIRDVVVLSGPSHAEEVALRQATTVTSAAKRME
AAEEVQDLFMNHYFRVYTNPDIIGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLDSMGMVVEGVRTTKAAYELAEKMEVEMPITAALYDVLFNGKNVKDA
VGSLMGRVRKHEVEAIPDLSR
>Mature_340_residues
TKITVIGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENKRYLPGITLPSTIVAYSSLEEALVDVSTVLLVVPT
KAYREVLQDMKKVISGPMTWIHASKGIEPGTSKRISEMIEEEIPEHLIRDVVVLSGPSHAEEVALRQATTVTSAAKRMEA
AEEVQDLFMNHYFRVYTNPDIIGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLT
GMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLDSMGMVVEGVRTTKAAYELAEKMEVEMPITAALYDVLFNGKNVKDAV
GSLMGRVRKHEVEAIPDLSR

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family

Homologues:

Organism=Homo sapiens, GI24307999, Length=344, Percent_Identity=31.9767441860465, Blast_Score=158, Evalue=9e-39,
Organism=Homo sapiens, GI33695088, Length=342, Percent_Identity=29.2397660818713, Blast_Score=147, Evalue=1e-35,
Organism=Escherichia coli, GI1790037, Length=330, Percent_Identity=43.6363636363636, Blast_Score=285, Evalue=3e-78,
Organism=Caenorhabditis elegans, GI32564399, Length=331, Percent_Identity=33.8368580060423, Blast_Score=148, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI32564403, Length=338, Percent_Identity=33.1360946745562, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI193210136, Length=338, Percent_Identity=33.1360946745562, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17507425, Length=336, Percent_Identity=31.547619047619, Blast_Score=140, Evalue=7e-34,
Organism=Caenorhabditis elegans, GI193210134, Length=331, Percent_Identity=30.8157099697885, Blast_Score=115, Evalue=4e-26,
Organism=Saccharomyces cerevisiae, GI6320181, Length=357, Percent_Identity=31.0924369747899, Blast_Score=143, Evalue=5e-35,
Organism=Saccharomyces cerevisiae, GI6324513, Length=348, Percent_Identity=29.3103448275862, Blast_Score=139, Evalue=6e-34,
Organism=Drosophila melanogaster, GI17136204, Length=351, Percent_Identity=31.0541310541311, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI17136202, Length=351, Percent_Identity=31.0541310541311, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI17136200, Length=351, Percent_Identity=31.0541310541311, Blast_Score=121, Evalue=6e-28,
Organism=Drosophila melanogaster, GI22026922, Length=288, Percent_Identity=26.0416666666667, Blast_Score=98, Evalue=7e-21,
Organism=Drosophila melanogaster, GI45551945, Length=239, Percent_Identity=30.5439330543933, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI281362270, Length=239, Percent_Identity=30.5439330543933, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24648969, Length=195, Percent_Identity=30.7692307692308, Blast_Score=82, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GPDA_BACCN (A7GN42)

Other databases:

- EMBL:   CP000764
- RefSeq:   YP_001374545.1
- ProteinModelPortal:   A7GN42
- SMR:   A7GN42
- STRING:   A7GN42
- EnsemblBacteria:   EBBACT00000036332
- GeneID:   5345111
- GenomeReviews:   CP000764_GR
- KEGG:   bcy:Bcer98_1228
- eggNOG:   COG0240
- GeneTree:   EBGT00050000002224
- HOGENOM:   HBG586392
- OMA:   SQTLRGN
- ProtClustDB:   PRK00094
- BioCyc:   BCER315749:BCER98_1228-MONOMER
- HAMAP:   MF_00394
- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040
- Gene3D:   G3DSA:3.40.50.720
- Gene3D:   G3DSA:1.10.1040.10
- PANTHER:   PTHR11728
- PIRSF:   PIRSF000114
- PRINTS:   PR00077

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N; SSF48179 6DGDH_C_like

EC number: =1.1.1.94

Molecular weight: Translated: 36946; Mature: 36815

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00957 NAD_G3PDH

Important sites: ACT_SITE 192-192 BINDING 106-106 BINDING 106-106 BINDING 141-141 BINDING 256-256 BINDING 282-282

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKITVIGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENKRYLPGITLPSTIV
CCEEEEEECCCHHHHEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
AYSSLEEALVDVSTVLLVVPTKAYREVLQDMKKVISGPMTWIHASKGIEPGTSKRISEMI
HHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHH
EEEIPEHLIRDVVVLSGPSHAEEVALRQATTVTSAAKRMEAAEEVQDLFMNHYFRVYTNP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECC
DIIGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
CEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLDSMGMVVEGVRTTKAAYELAEKMEVE
CCCCHHHHEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MPITAALYDVLFNGKNVKDAVGSLMGRVRKHEVEAIPDLSR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TKITVIGAGSWGTALAMVLADNGHDVRIWGNRPELMDEINTKHENKRYLPGITLPSTIV
CEEEEEECCCHHHHEEEEEECCCCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
AYSSLEEALVDVSTVLLVVPTKAYREVLQDMKKVISGPMTWIHASKGIEPGTSKRISEMI
HHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHH
EEEIPEHLIRDVVVLSGPSHAEEVALRQATTVTSAAKRMEAAEEVQDLFMNHYFRVYTNP
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECC
DIIGVELGGALKNIIALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGL
CEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECC
TGMGDLIVTCTSVHSRNWRAGNMLGKGHSLEEVLDSMGMVVEGVRTTKAAYELAEKMEVE
CCCCHHHHEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MPITAALYDVLFNGKNVKDAVGSLMGRVRKHEVEAIPDLSR
CCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA