Click here to switch to the map view.

The map label for this gene is cmk

Identifier: 152975020

GI number: 152975020

Start: 1332693

End: 1333370

Strand: Direct

Name: cmk

Synonym: Bcer98_1220

Alternate gene names: 152975020

Gene position: 1332693-1333370 (Clockwise)

Preceding gene: 152975019

Following gene: 152975021

Centisome position: 32.61

GC content: 37.91

Gene sequence:

>678_bases
ATGGATAAACGAATTTCAATTGCGATAGATGGTCCAGCAGCGGCTGGGAAAAGTACGGTTGCAAAAGTTGTAGCAAAACA
ACTTTCTTATGTATATATTGATACAGGTGCAATGTATCGTACGCTTACATATGCTGCTCTTGAGCAAAATATTGATATTG
AAAATGAAGAAAAGTTAATGGAAGTTTTGCAAAGTATACGTATTGAATTTCAACAAGGAAAAGATACACAACAAGTCTTT
TTAAATGGACAAGATGTATCTGAAGTGATTCGTACACCAGATGTAACAAATCGTGTATCAATTGTGGCAAAGCATCGTCT
TGTTAGAGAAGAGATGGTACGCCGTCAACAGGAGTTAGCGGCACAAGGTGGCGTTGTAATGGATGGACGTGACATTGGGA
CGCATGTACTTCCTAATGCTGAGGTGAAAATTTTTATGCTCGCTTCTGTTGAAGAAAGAGCGGAACGCAGACATTTAGAG
AATATGAGGAAAGGTTTTTCCTCTAATTTAGAACAATTGAAAAAAGAAATTGCTCAGCGTGATAAGCTAGACTCAGAACG
TGAAGTATCTCCGCTGAAAAAAGCTGAAGATGCGTTTGAATTAGATACAACTTCTTTATCCATTGAAGAAGTTGTTCGAA
ACATTATGGCCATCGTCTCTGAAGCATTGCAAAAATAG

Upstream 100 bases:

>100_bases
ACAATAATGAAGGATGAAAAGGATTAAAACTGACAGAGGGAAGCAGGGGGACATACCTGCTTTTCATTTTGTTTTATAAG
TGAAAAATGAGGTGTTACAA

Downstream 100 bases:

>100_bases
AGAAAGGGGAATCGTCCTCTTTCTTTTTTTATAGAAGTAATGATACGGTAGAGGACACTTTTCTTGACAAATATATGAAT
TTATAAGAAGTTAGTTAAAG

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDKRISIAIDGPAAAGKSTVAKVVAKQLSYVYIDTGAMYRTLTYAALEQNIDIENEEKLMEVLQSIRIEFQQGKDTQQVF
LNGQDVSEVIRTPDVTNRVSIVAKHRLVREEMVRRQQELAAQGGVVMDGRDIGTHVLPNAEVKIFMLASVEERAERRHLE
NMRKGFSSNLEQLKKEIAQRDKLDSEREVSPLKKAEDAFELDTTSLSIEEVVRNIMAIVSEALQK

Sequences:

>Translated_225_residues
MDKRISIAIDGPAAAGKSTVAKVVAKQLSYVYIDTGAMYRTLTYAALEQNIDIENEEKLMEVLQSIRIEFQQGKDTQQVF
LNGQDVSEVIRTPDVTNRVSIVAKHRLVREEMVRRQQELAAQGGVVMDGRDIGTHVLPNAEVKIFMLASVEERAERRHLE
NMRKGFSSNLEQLKKEIAQRDKLDSEREVSPLKKAEDAFELDTTSLSIEEVVRNIMAIVSEALQK
>Mature_225_residues
MDKRISIAIDGPAAAGKSTVAKVVAKQLSYVYIDTGAMYRTLTYAALEQNIDIENEEKLMEVLQSIRIEFQQGKDTQQVF
LNGQDVSEVIRTPDVTNRVSIVAKHRLVREEMVRRQQELAAQGGVVMDGRDIGTHVLPNAEVKIFMLASVEERAERRHLE
NMRKGFSSNLEQLKKEIAQRDKLDSEREVSPLKKAEDAFELDTTSLSIEEVVRNIMAIVSEALQK

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=206, Percent_Identity=46.1165048543689, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_BACCN (A7GN34)

Other databases:

- EMBL:   CP000764
- RefSeq:   YP_001374537.1
- ProteinModelPortal:   A7GN34
- SMR:   A7GN34
- STRING:   A7GN34
- EnsemblBacteria:   EBBACT00000037114
- GeneID:   5345069
- GenomeReviews:   CP000764_GR
- KEGG:   bcy:Bcer98_1220
- eggNOG:   COG0283
- GeneTree:   EBGT00050000002974
- HOGENOM:   HBG354377
- OMA:   DIGTVIC
- ProtClustDB:   PRK00023
- BioCyc:   BCER315749:BCER98_1220-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 25386; Mature: 25386

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKRISIAIDGPAAAGKSTVAKVVAKQLSYVYIDTGAMYRTLTYAALEQNIDIENEEKLM
CCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCCHHHHH
EVLQSIRIEFQQGKDTQQVFLNGQDVSEVIRTPDVTNRVSIVAKHRLVREEMVRRQQELA
HHHHHHHHHHHCCCCHHHHEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQGGVVMDGRDIGTHVLPNAEVKIFMLASVEERAERRHLENMRKGFSSNLEQLKKEIAQR
HCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLDSEREVSPLKKAEDAFELDTTSLSIEEVVRNIMAIVSEALQK
HCCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKRISIAIDGPAAAGKSTVAKVVAKQLSYVYIDTGAMYRTLTYAALEQNIDIENEEKLM
CCCEEEEEECCCCCCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHCCCCCCHHHHH
EVLQSIRIEFQQGKDTQQVFLNGQDVSEVIRTPDVTNRVSIVAKHRLVREEMVRRQQELA
HHHHHHHHHHHCCCCHHHHEECCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQGGVVMDGRDIGTHVLPNAEVKIFMLASVEERAERRHLENMRKGFSSNLEQLKKEIAQR
HCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKLDSEREVSPLKKAEDAFELDTTSLSIEEVVRNIMAIVSEALQK
HCCCCCHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA