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The map label for this gene is liaH [H]

Identifier: 152974960

GI number: 152974960

Start: 1268988

End: 1269650

Strand: Direct

Name: liaH [H]

Synonym: Bcer98_1157

Alternate gene names: 152974960

Gene position: 1268988-1269650 (Clockwise)

Preceding gene: 152974959

Following gene: 152974961

Centisome position: 31.05

GC content: 34.84

Gene sequence:

>663_bases
ATGAAACAATCTTTATTTGGCCGTGTACGCGATGCGATTTTAGCAGATCTTCATAATGTATTAGATGAAAAAGAAAGAAA
AAACCCAATTGCTATGTTAAACCAATATTTACGTGATAGTGAACGTGAAATAACAAAAATTGAAAAGTTAATTGAGCGTC
ATAAAACGTTAAAAACGAACTTTGCTCGTGAGCTTGAAGAGGCACGTTATTTCGTAAATAAGAGATCTAAGCAAGCCATT
ATTGCACAAGAAGCAGGAGAACTGCAACTACATGAGCGTGCTTTAGAAGAAGTCGCATATTATGAAGGACAAGTGGCTCG
TTTAGAAGAAATGTATGCAGGTGTTATCGAACAAATTGACGAATTAGAACGTCGCCTTTCTGAAATGAAAAATAAATTAA
AAGAAATGAATGCAAAGCGTATGCAACTGATGGCGCGTGAGAATATGGCGCATGCGAATCGTCGTATGAATACAGCGCTT
CATAAAATGGATGAAAGCAATCCGTTTTTACGATTTGAAGAAATAGAAGATCATATTCGTGATTTAGAACTTCGCATAAA
TGAAGGGTATGAACGTGATACTTTTGATATGAAAATTGCTAAACTGGAGCGCGAAATGAAAGATAAAAATGAAGTATCTT
TAAACAAAGAAGGGATAAAATAA

Upstream 100 bases:

>100_bases
GTTCTACAAGATATAGCAACTTTGAAGATGAGTGGAATAAGTTAATGAAAAACTAGTATAAACGAATTTAACTGATAAAA
TAGAAGAGAGGAAGATTAGG

Downstream 100 bases:

>100_bases
TTGTAGTATATTATAAAACGAGCATATGATATAGTGATAGAAGAAAAGGTGTTGGTAAGCAATACCTTTTTCTTCTATTT
ATCTCGCAGTAACGGGTAGC

Product: phage shock protein A, PspA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKQSLFGRVRDAILADLHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIERHKTLKTNFARELEEARYFVNKRSKQAI
IAQEAGELQLHERALEEVAYYEGQVARLEEMYAGVIEQIDELERRLSEMKNKLKEMNAKRMQLMARENMAHANRRMNTAL
HKMDESNPFLRFEEIEDHIRDLELRINEGYERDTFDMKIAKLEREMKDKNEVSLNKEGIK

Sequences:

>Translated_220_residues
MKQSLFGRVRDAILADLHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIERHKTLKTNFARELEEARYFVNKRSKQAI
IAQEAGELQLHERALEEVAYYEGQVARLEEMYAGVIEQIDELERRLSEMKNKLKEMNAKRMQLMARENMAHANRRMNTAL
HKMDESNPFLRFEEIEDHIRDLELRINEGYERDTFDMKIAKLEREMKDKNEVSLNKEGIK
>Mature_220_residues
MKQSLFGRVRDAILADLHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIERHKTLKTNFARELEEARYFVNKRSKQAI
IAQEAGELQLHERALEEVAYYEGQVARLEEMYAGVIEQIDELERRLSEMKNKLKEMNAKRMQLMARENMAHANRRMNTAL
HKMDESNPFLRFEEIEDHIRDLELRINEGYERDTFDMKIAKLEREMKDKNEVSLNKEGIK

Specific function: Unknown

COG id: COG1842

COG function: function code KT; Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PspA/IM30 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007157 [H]

Pfam domain/function: PF04012 PspA_IM30 [H]

EC number: NA

Molecular weight: Translated: 26281; Mature: 26281

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSLFGRVRDAILADLHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIERHKTLKTN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARELEEARYFVNKRSKQAIIAQEAGELQLHERALEEVAYYEGQVARLEEMYAGVIEQID
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ELERRLSEMKNKLKEMNAKRMQLMARENMAHANRRMNTALHKMDESNPFLRFEEIEDHIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
DLELRINEGYERDTFDMKIAKLEREMKDKNEVSLNKEGIK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKQSLFGRVRDAILADLHNVLDEKERKNPIAMLNQYLRDSEREITKIEKLIERHKTLKTN
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FARELEEARYFVNKRSKQAIIAQEAGELQLHERALEEVAYYEGQVARLEEMYAGVIEQID
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ELERRLSEMKNKLKEMNAKRMQLMARENMAHANRRMNTALHKMDESNPFLRFEEIEDHIR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHH
DLELRINEGYERDTFDMKIAKLEREMKDKNEVSLNKEGIK
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]