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The map label for this gene is yhdW [H]

Identifier: 152974832

GI number: 152974832

Start: 1145504

End: 1146487

Strand: Direct

Name: yhdW [H]

Synonym: Bcer98_1028

Alternate gene names: 152974832

Gene position: 1145504-1146487 (Clockwise)

Preceding gene: 152974831

Following gene: 152974835

Centisome position: 28.03

GC content: 37.4

Gene sequence:

>984_bases
ATGAATAAAATAAAACGGTTACTGAAACGTAAAACGACTTGGATAATTCTTATCCTATTTGTATTTGTTTATGTAAATAA
CAGTTCTCTTTTGGCTAAGAGGGCCGAGGGGACTCCTCTTCTTCTTGCTCACCGAGGACTTTCGCAAACATTTAGCATGG
AAGGGATTGAGGATGATACATGTACAGCAGAACGTATAGATAAACCTGAACATCCTTATTTAGAAAATACAATTCCATCT
ATGGAAGCGGCATTTAAAGCTGGAGCTGATCTAGTAGAGTTTGATGTTCAACCAACTAAAGATAATAATTTTGTTATTTT
TCATGACTGGACTCTTGATTGCCGTACTAATGGTAAAGGTGTTACAAGAGATTTTACAACAAAAGAATTACAAGCACTTG
ATATTGGTTACGGTTATACAGCTGATGGGGGTAAAACATTCCCGTTTCGTGGTAAAGGGATTAATCTTATGCCAACACTT
GATGAAGTACTTCACCATTTTCCAGATCGTTCTTTTCTTATTCATATTAAAAGTGATGATGAAAATGAAGGAAACCAATT
GGCGGCTTACCTCAAGAAACTACCAGCGAAACGCCTTGATCAACTAACTGTATATGGCGGTGATAAACCAATTGCTGCGA
TAAAAGAGCGTATCCCTAGTTTACGAACAATGTCAAAAGCAACCATGAAAAAGGATCTTCTTACTTATATTGCATTAGGG
TGGACTGGCTACATACCTTCAAGCCTGAAGCATGGAGAATTACATATACCAGACAAAGTAGCTCCTTGGCTTTGGGGATG
GCCAAATCGTTTTCTTAATCGAATGGATAAAGCGGGTACTCGAGTTATCGTTGTAGGAGGAAATGGATTTGGATTTTCAA
GTGGATTTGACTCATCTGAAGATATAAAACGTCTTCCTGACGATTATACAGGTGGAATTTGGACAAACCGCATTGATAAA
ATAGCACCTGTATTTAAGAAATAA

Upstream 100 bases:

>100_bases
TATCCATTGCAATAAAATATGATTGGTTGTAACATTTACCAGTATTTAAATGACGAACATTGTTTAAAGGATTTTAACTA
GTATTTAAGAGGAGAATACA

Downstream 100 bases:

>100_bases
GGGATGATATAACAATCGAAGTTTTTTCATATGTTTAACTATTTATATTTTAAAAGAAAACGTATTAATAATGTTGAAGT
TTTATATGCGCCCGATCTCC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNKIKRLLKRKTTWIILILFVFVYVNNSSLLAKRAEGTPLLLAHRGLSQTFSMEGIEDDTCTAERIDKPEHPYLENTIPS
MEAAFKAGADLVEFDVQPTKDNNFVIFHDWTLDCRTNGKGVTRDFTTKELQALDIGYGYTADGGKTFPFRGKGINLMPTL
DEVLHHFPDRSFLIHIKSDDENEGNQLAAYLKKLPAKRLDQLTVYGGDKPIAAIKERIPSLRTMSKATMKKDLLTYIALG
WTGYIPSSLKHGELHIPDKVAPWLWGWPNRFLNRMDKAGTRVIVVGGNGFGFSSGFDSSEDIKRLPDDYTGGIWTNRIDK
IAPVFKK

Sequences:

>Translated_327_residues
MNKIKRLLKRKTTWIILILFVFVYVNNSSLLAKRAEGTPLLLAHRGLSQTFSMEGIEDDTCTAERIDKPEHPYLENTIPS
MEAAFKAGADLVEFDVQPTKDNNFVIFHDWTLDCRTNGKGVTRDFTTKELQALDIGYGYTADGGKTFPFRGKGINLMPTL
DEVLHHFPDRSFLIHIKSDDENEGNQLAAYLKKLPAKRLDQLTVYGGDKPIAAIKERIPSLRTMSKATMKKDLLTYIALG
WTGYIPSSLKHGELHIPDKVAPWLWGWPNRFLNRMDKAGTRVIVVGGNGFGFSSGFDSSEDIKRLPDDYTGGIWTNRIDK
IAPVFKK
>Mature_327_residues
MNKIKRLLKRKTTWIILILFVFVYVNNSSLLAKRAEGTPLLLAHRGLSQTFSMEGIEDDTCTAERIDKPEHPYLENTIPS
MEAAFKAGADLVEFDVQPTKDNNFVIFHDWTLDCRTNGKGVTRDFTTKELQALDIGYGYTADGGKTFPFRGKGINLMPTL
DEVLHHFPDRSFLIHIKSDDENEGNQLAAYLKKLPAKRLDQLTVYGGDKPIAAIKERIPSLRTMSKATMKKDLLTYIALG
WTGYIPSSLKHGELHIPDKVAPWLWGWPNRFLNRMDKAGTRVIVVGGNGFGFSSGFDSSEDIKRLPDDYTGGIWTNRIDK
IAPVFKK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to sn-glycerol 3-phosphate (G3P) and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 36881; Mature: 36881

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKIKRLLKRKTTWIILILFVFVYVNNSSLLAKRAEGTPLLLAHRGLSQTFSMEGIEDDT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEEEEEECCCCHHHCCCCCCCCC
CTAERIDKPEHPYLENTIPSMEAAFKAGADLVEFDVQPTKDNNFVIFHDWTLDCRTNGKG
CCHHHCCCCCCCCHHHCCCHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCC
VTRDFTTKELQALDIGYGYTADGGKTFPFRGKGINLMPTLDEVLHHFPDRSFLIHIKSDD
CCCCCCHHHHHEEECCCCEECCCCCCCCCCCCCCEECCCHHHHHHHCCCCEEEEEEECCC
ENEGNQLAAYLKKLPAKRLDQLTVYGGDKPIAAIKERIPSLRTMSKATMKKDLLTYIALG
CCCHHHHHHHHHHCCHHHHCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
WTGYIPSSLKHGELHIPDKVAPWLWGWPNRFLNRMDKAGTRVIVVGGNGFGFSSGFDSSE
HCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHH
DIKRLPDDYTGGIWTNRIDKIAPVFKK
HHHHCCCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKIKRLLKRKTTWIILILFVFVYVNNSSLLAKRAEGTPLLLAHRGLSQTFSMEGIEDDT
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEEEEEECCCCHHHCCCCCCCCC
CTAERIDKPEHPYLENTIPSMEAAFKAGADLVEFDVQPTKDNNFVIFHDWTLDCRTNGKG
CCHHHCCCCCCCCHHHCCCHHHHHHHCCCCEEEECCCCCCCCCEEEEEEEEEEEECCCCC
VTRDFTTKELQALDIGYGYTADGGKTFPFRGKGINLMPTLDEVLHHFPDRSFLIHIKSDD
CCCCCCHHHHHEEECCCCEECCCCCCCCCCCCCCEECCCHHHHHHHCCCCEEEEEEECCC
ENEGNQLAAYLKKLPAKRLDQLTVYGGDKPIAAIKERIPSLRTMSKATMKKDLLTYIALG
CCCHHHHHHHHHHCCHHHHCEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
WTGYIPSSLKHGELHIPDKVAPWLWGWPNRFLNRMDKAGTRVIVVGGNGFGFSSGFDSSE
HCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHH
DIKRLPDDYTGGIWTNRIDKIAPVFKK
HHHHCCCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]