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The map label for this gene is oppB [H]

Identifier: 152974709

GI number: 152974709

Start: 1014596

End: 1015525

Strand: Direct

Name: oppB [H]

Synonym: Bcer98_0897

Alternate gene names: 152974709

Gene position: 1014596-1015525 (Clockwise)

Preceding gene: 152974706

Following gene: 152974710

Centisome position: 24.82

GC content: 37.42

Gene sequence:

>930_bases
ATGGGACGTTATGTATTAAAGCGTTTCGTATATATGTTTTTGACATTATTTTTAATTACATCATTAACATTCTTCTTAAT
GAAATTATTGCCGGGTTCTCCACTCAAAAATCAGGAGAAATTATCTCCGGAACAAAAAGAAATCATTTTGGAGAAATATG
GTTTAAATGATCCGGTACCAGTGCAGTACGCACGCTATTTAGGAAACTTAGCAAAAGGCGATTTAGGAGTATCGTTCCAA
TATGATAATCGTCCGGTAACGGATATGATTGCAGAACGTATTGGACCATCCGCCCAGCTCGGTTTTCAGGCAATTCTTTT
AGGGTCATTTATTGGGCTAATTTTAGGAATTATTGCAGCACTTCGAAATAATACATGGGTCGATTATGGGGCGACGATTA
TTTCCGTACTCGGAATGTCGGTACCATCCTTTGTATTTGCAGCACTATTACAATATTTCGTAGGGGTAAAACTCGGCTGG
TTCCCAGTTGCATTCTGGAAAGGACCTGAATTTACAGTTATGCCAACAATCGCTTTATCGATGGCAGTTATTGCAACAAT
CGCACGTTTTGCTCGTGCTGAATTAATTGAAGTAATGCAAGCTGATTATATTTTAACAGCGAAGGCAAAAGGAATTAGTC
AAGGCGTCATTATTGTGAAACATGCTCTTCGTAATGCACTGATTCCAGTTGTTACAATTTTAGGGCCGATGGTTGCAGGG
TTGATTACAGGAACACTTGTTATTGAGCAAATTTATGCTGTTCCTGGACTTGGGGAACAATTCGTTAAGTCGATTACATT
AAATGATTATACAGTTATTATGGGGACAACAATTTTCTATAGTGCAGTCTTTATTTTCGTTATTTTCATCGTAGATATTT
TATATGGAATTATTGATCCTCGTATTCGTTTAGCGGGAGGGAAAAAATGA

Upstream 100 bases:

>100_bases
TATGTCCATGATGGGCATATGCTCTTATTTTAAAAATATAAAAGTAAGAATATTTAAAACTATCTTATTGCTTTTGAAAA
AAATGGGGAGGTGCTTGACT

Downstream 100 bases:

>100_bases
TGAAAGATGTACAAAAATTATCTCCAGATTTATTTCAACCAGCAAATCAAAGTAATGTTGATAATGAAGTCATTGCCCGT
CCGAGCTTAACGTTTTGGCA

Product: binding-protein-dependent transport systems inner membrane component

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: Stage 0 sporulation protein KB [H]

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MGRYVLKRFVYMFLTLFLITSLTFFLMKLLPGSPLKNQEKLSPEQKEIILEKYGLNDPVPVQYARYLGNLAKGDLGVSFQ
YDNRPVTDMIAERIGPSAQLGFQAILLGSFIGLILGIIAALRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGW
FPVAFWKGPEFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAG
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAVFIFVIFIVDILYGIIDPRIRLAGGKK

Sequences:

>Translated_309_residues
MGRYVLKRFVYMFLTLFLITSLTFFLMKLLPGSPLKNQEKLSPEQKEIILEKYGLNDPVPVQYARYLGNLAKGDLGVSFQ
YDNRPVTDMIAERIGPSAQLGFQAILLGSFIGLILGIIAALRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGW
FPVAFWKGPEFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAG
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAVFIFVIFIVDILYGIIDPRIRLAGGKK
>Mature_308_residues
GRYVLKRFVYMFLTLFLITSLTFFLMKLLPGSPLKNQEKLSPEQKEIILEKYGLNDPVPVQYARYLGNLAKGDLGVSFQY
DNRPVTDMIAERIGPSAQLGFQAILLGSFIGLILGIIAALRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGWF
PVAFWKGPEFTVMPTIALSMAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAGL
ITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAVFIFVIFIVDILYGIIDPRIRLAGGKK

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=305, Percent_Identity=42.6229508196721, Blast_Score=253, Evalue=1e-68,
Organism=Escherichia coli, GI1787053, Length=305, Percent_Identity=36.7213114754098, Blast_Score=214, Evalue=4e-57,
Organism=Escherichia coli, GI1789965, Length=337, Percent_Identity=30.5637982195846, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=31.8471337579618, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI1787761, Length=321, Percent_Identity=31.1526479750779, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1788504, Length=364, Percent_Identity=23.6263736263736, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787550, Length=266, Percent_Identity=27.0676691729323, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34000; Mature: 33869

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRYVLKRFVYMFLTLFLITSLTFFLMKLLPGSPLKNQEKLSPEQKEIILEKYGLNDPVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCH
VQYARYLGNLAKGDLGVSFQYDNRPVTDMIAERIGPSAQLGFQAILLGSFIGLILGIIAA
HHHHHHHCCHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGWFPVAFWKGPEFTVMPTIALS
HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCEEEEEECCCCCEEHHHHHHH
MAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAG
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAVFIFVIFIVDILYGIIDP
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIRLAGGKK
CEEECCCCC
>Mature Secondary Structure 
GRYVLKRFVYMFLTLFLITSLTFFLMKLLPGSPLKNQEKLSPEQKEIILEKYGLNDPVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCH
VQYARYLGNLAKGDLGVSFQYDNRPVTDMIAERIGPSAQLGFQAILLGSFIGLILGIIAA
HHHHHHHCCHHCCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRNNTWVDYGATIISVLGMSVPSFVFAALLQYFVGVKLGWFPVAFWKGPEFTVMPTIALS
HHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCEEEEEECCCCCEEHHHHHHH
MAVIATIARFARAELIEVMQADYILTAKAKGISQGVIIVKHALRNALIPVVTILGPMVAG
HHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LITGTLVIEQIYAVPGLGEQFVKSITLNDYTVIMGTTIFYSAVFIFVIFIVDILYGIIDP
HHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RIRLAGGKK
CEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]