Click here to switch to the map view.

The map label for this gene is yitL [H]

Identifier: 152974690

GI number: 152974690

Start: 995836

End: 996690

Strand: Direct

Name: yitL [H]

Synonym: Bcer98_0877

Alternate gene names: 152974690

Gene position: 995836-996690 (Clockwise)

Preceding gene: 152974688

Following gene: 152974693

Centisome position: 24.37

GC content: 38.36

Gene sequence:

>855_bases
ATGTATTTTAAACCAGGATCGATCGAACAGGTAACGGTTTTACGTCAAACGGAAATCGGATATATGGTCGGGCACGATGA
AGAAGAAGTGTTCCTACATAAAAATGAAGTTGCAGGGGATATTGAAGAAGGTGACACAATTGATGTATTTTTCTATCTTG
ATCACCAAGAGCGTATTGCTGCAACAATGAAGACTCCACTTATTACAACAAGTGATTGGAATTGGGTAAAAGTTGTTGAA
GTGAAAGAGCGCTTAGGAGTATTCGTTGATATCGGTGTTTCGAAAGATATTTTAGTACCAGCGGATGAGTTTCCTATTTA
TACACCAGTTTGGCCTGAAGTAGGAGATGAATTATATTGTACGCTAAAATTAACGAAGCGTGGCCGCTTAATTGCGTTAC
CAGCAAGAGATGCAGACATGCAAGAAATTGTAGTGGAAGCAACTCCATCTATGCGTAATAAAAATGTAAATGGGCGTGTG
TATCGCTCACTTCAAGTTGGATCATTTGTATTAACAGATGAACATTTCCGGGCTTTTTTACATCATACAGAACGAAAAGA
GCAAGTTCGTATTGGTCAGCGTGTAACAGGTCGTATTATTGACGTGAAAGAGGATGGTACAATTAATATTTCACTTCTGC
CTCGTAAAGAAGAGGGAATAGAAGATGATGCTACGGTTATTTATGAATATATGGAAAGTCGCGGGGGCGCCATGCCATTT
TGGGATAAGAGTTATCCAGAAGACATTAAAGAACGATTCAATATGAGTAAAGCAGCGTTTAAGCGTGCACTTGGTAAATT
AATGAAAGAAGGAAAAGTGTATCAAGAAGAAGGCTGGACATACTTTAAAAAATAA

Upstream 100 bases:

>100_bases
TTTTGGGCAGTTGGACAAATAAAGGAAAAATCGTGTTATAATGTACTTTTGTTTGGAATGATAAAAATATAACTTTATAT
ATAGAAGGGAATTAAAAAGT

Downstream 100 bases:

>100_bases
GAAAACGAACAAGCACTTTGCTTGTTCGTTTTTGAAAAGAAACCTTGTCATAATTTGTCGGGAAATCGATATCCCTTGTC
GAATCGCCGATATATTTTAT

Product: RNA-binding S1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MYFKPGSIEQVTVLRQTEIGYMVGHDEEEVFLHKNEVAGDIEEGDTIDVFFYLDHQERIAATMKTPLITTSDWNWVKVVE
VKERLGVFVDIGVSKDILVPADEFPIYTPVWPEVGDELYCTLKLTKRGRLIALPARDADMQEIVVEATPSMRNKNVNGRV
YRSLQVGSFVLTDEHFRAFLHHTERKEQVRIGQRVTGRIIDVKEDGTINISLLPRKEEGIEDDATVIYEYMESRGGAMPF
WDKSYPEDIKERFNMSKAAFKRALGKLMKEGKVYQEEGWTYFKK

Sequences:

>Translated_284_residues
MYFKPGSIEQVTVLRQTEIGYMVGHDEEEVFLHKNEVAGDIEEGDTIDVFFYLDHQERIAATMKTPLITTSDWNWVKVVE
VKERLGVFVDIGVSKDILVPADEFPIYTPVWPEVGDELYCTLKLTKRGRLIALPARDADMQEIVVEATPSMRNKNVNGRV
YRSLQVGSFVLTDEHFRAFLHHTERKEQVRIGQRVTGRIIDVKEDGTINISLLPRKEEGIEDDATVIYEYMESRGGAMPF
WDKSYPEDIKERFNMSKAAFKRALGKLMKEGKVYQEEGWTYFKK
>Mature_284_residues
MYFKPGSIEQVTVLRQTEIGYMVGHDEEEVFLHKNEVAGDIEEGDTIDVFFYLDHQERIAATMKTPLITTSDWNWVKVVE
VKERLGVFVDIGVSKDILVPADEFPIYTPVWPEVGDELYCTLKLTKRGRLIALPARDADMQEIVVEATPSMRNKNVNGRV
YRSLQVGSFVLTDEHFRAFLHHTERKEQVRIGQRVTGRIIDVKEDGTINISLLPRKEEGIEDDATVIYEYMESRGGAMPF
WDKSYPEDIKERFNMSKAAFKRALGKLMKEGKVYQEEGWTYFKK

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32809; Mature: 32809

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFKPGSIEQVTVLRQTEIGYMVGHDEEEVFLHKNEVAGDIEEGDTIDVFFYLDHQERIA
CCCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHHH
ATMKTPLITTSDWNWVKVVEVKERLGVFVDIGVSKDILVPADEFPIYTPVWPEVGDELYC
HHHCCCEEEECCCCEEEEEEEHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEE
TLKLTKRGRLIALPARDADMQEIVVEATPSMRNKNVNGRVYRSLQVGSFVLTDEHFRAFL
EEEEECCCCEEEEECCCCCHHHHEEECCCCCCCCCCCCEEEEEEECCEEEEEHHHHHHHH
HHTERKEQVRIGQRVTGRIIDVKEDGTINISLLPRKEEGIEDDATVIYEYMESRGGAMPF
HHHCHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC
WDKSYPEDIKERFNMSKAAFKRALGKLMKEGKVYQEEGWTYFKK
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEEECCC
>Mature Secondary Structure
MYFKPGSIEQVTVLRQTEIGYMVGHDEEEVFLHKNEVAGDIEEGDTIDVFFYLDHQERIA
CCCCCCCCCEEEEEEECCCCEEECCCCCEEEEECCCCCCCCCCCCEEEEEEEECCHHHHH
ATMKTPLITTSDWNWVKVVEVKERLGVFVDIGVSKDILVPADEFPIYTPVWPEVGDELYC
HHHCCCEEEECCCCEEEEEEEHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEE
TLKLTKRGRLIALPARDADMQEIVVEATPSMRNKNVNGRVYRSLQVGSFVLTDEHFRAFL
EEEEECCCCEEEEECCCCCHHHHEEECCCCCCCCCCCCEEEEEEECCEEEEEHHHHHHHH
HHTERKEQVRIGQRVTGRIIDVKEDGTINISLLPRKEEGIEDDATVIYEYMESRGGAMPF
HHHCHHHHHHHCCCCCCEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCC
WDKSYPEDIKERFNMSKAAFKRALGKLMKEGKVYQEEGWTYFKK
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]