Click here to switch to the map view.

The map label for this gene is yhjB [H]

Identifier: 152974585

GI number: 152974585

Start: 879246

End: 880724

Strand: Direct

Name: yhjB [H]

Synonym: Bcer98_0767

Alternate gene names: 152974585

Gene position: 879246-880724 (Clockwise)

Preceding gene: 152974584

Following gene: 152974586

Centisome position: 21.51

GC content: 38.0

Gene sequence:

>1479_bases
ATGAATAGTGCTATATTTATATTGATAGGCACTTTTTTACTTACCTTTTATTTAGGAATGCATGCTCGTAAAGGGCGAGA
AATGCAGCTGGAACAATGGGCGGTAGGGAATCGGAATTTTGGTTCTGTTATTATGTTTGTGTTAATGGCTGGCGAAATTT
TTACGACGTATGTATTTCTTGGTGGAAGCGGTGGGGCTTATCGAATGGGAGGGCCGATTATTTATATTTTTAACGCATTT
TGTTATATTGTCCCATTTTGGATTCTTCCCCCCATTTGGCGCTATGCAAAGAAACATACACTTCTTACGCAGTCTGACTT
TTTTGCGAAAAAATATAATAGCAAACCTCTAGGTTTATTAGTAGCGGTCGTTGGGATTGTTTCCATGATTCCTTATATCG
TTTTACAGTTAAAGGGGCTTAAGATTATTGTATCGGAAGCTTCATATGGTATGGTTTCCCCTAATTTAGCCGTTTGGATT
GGCATGATTGCCGTCACTATATTCGTTTCACTGTCCGGTATACACGGTTCAGCATCCACAGCCATCTTAAAAGATATTCT
CCTGCTTATTGTCATTTTATTTTTAGGTATTTATTTACCTTATCATTATTACGGCGGTATTAAGCCAATGTTTGAAACAT
TAGATGCAACTAAACCGGAGTTCTTACTGATTCCGAAAGAAGGGTACAGTATATCGTGGTATATTTCTACTTGTATTACG
ATCGGGTTAGGACAATATATGTGGCCACAATGTTTCGGGGCTAGTTTATCATCAAAGGATGAGCGGACATTGCGAAAAAA
TGCTGCTATTTTACCGCTGTACCAAATTATATTAGTGTTCATCTTATTTATTGGCTTCACAGCCCTGTTACAAATTCCAA
ACTTACAAGGGGCAGATACCGATTTGGCGTTATTTAAAATTGCAAAAGCAACCTTTGATCCGTGGGTAGTCGGAGTAATC
GGAGCGGCAGGTATTTTAACAGCACTTGTTCCATGCTCTATGTTATTACTGACAGCATCAACCATTTTGTCAAAGAATAT
TTATAGGACAATGAGACCAAATACAACGGATGCACAAATTGGACGATTAACTCGTATATTTGTTCCGATTGTTGCACTAA
TCGCTGTATTTTTTACGTTTTATGGTGGAAGCAGCATTATTGCATTGTTGATCATGGCTTATAGCTTTGTATTACAATTA
TTTCCACCTCTGTTTTGTAGCTTATGGAAAAGGAATCCGATTAATAGAGTAGGTGCTTTTGCAGGGATTATAGCTGGCGT
CATTGTCGTTGCATATATCACTATAAAACAAGCGACGATGGGAACATTCTTTCCGCAAGCTCCGCAGTTTATAAAAGACA
TTGATGTCGGCATAGCGGCTCTTGTAGTGAACATAGTAATCATGTTTGTTGTCAGCGTTGTTACAAATAAAGGAAAGGAA
AAACTAGAGCCTGAGATTACGTTGCAAAAAACAGTATAG

Upstream 100 bases:

>100_bases
CCTTTCATTGTATTTTGGGCGGCTGCCTGGCTAGTTTTAACTTCTGTCTGTTTATATGTGATGAGCATTATTCAAGATCG
GCAGGAGGAGGGGAAGCTTG

Downstream 100 bases:

>100_bases
ATTCTTAAAGAAGAAACCCGGCTGAAAGAAACGATATGTTTTCAGTTGGGTTAGATTTTTTTATGAGAGTACATGATTAA
GAACATAAAAAATGAAACCT

Product: Na+ symporter

Products: Na (I) [Cytoplasm]; pantothenate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MNSAIFILIGTFLLTFYLGMHARKGREMQLEQWAVGNRNFGSVIMFVLMAGEIFTTYVFLGGSGGAYRMGGPIIYIFNAF
CYIVPFWILPPIWRYAKKHTLLTQSDFFAKKYNSKPLGLLVAVVGIVSMIPYIVLQLKGLKIIVSEASYGMVSPNLAVWI
GMIAVTIFVSLSGIHGSASTAILKDILLLIVILFLGIYLPYHYYGGIKPMFETLDATKPEFLLIPKEGYSISWYISTCIT
IGLGQYMWPQCFGASLSSKDERTLRKNAAILPLYQIILVFILFIGFTALLQIPNLQGADTDLALFKIAKATFDPWVVGVI
GAAGILTALVPCSMLLLTASTILSKNIYRTMRPNTTDAQIGRLTRIFVPIVALIAVFFTFYGGSSIIALLIMAYSFVLQL
FPPLFCSLWKRNPINRVGAFAGIIAGVIVVAYITIKQATMGTFFPQAPQFIKDIDVGIAALVVNIVIMFVVSVVTNKGKE
KLEPEITLQKTV

Sequences:

>Translated_492_residues
MNSAIFILIGTFLLTFYLGMHARKGREMQLEQWAVGNRNFGSVIMFVLMAGEIFTTYVFLGGSGGAYRMGGPIIYIFNAF
CYIVPFWILPPIWRYAKKHTLLTQSDFFAKKYNSKPLGLLVAVVGIVSMIPYIVLQLKGLKIIVSEASYGMVSPNLAVWI
GMIAVTIFVSLSGIHGSASTAILKDILLLIVILFLGIYLPYHYYGGIKPMFETLDATKPEFLLIPKEGYSISWYISTCIT
IGLGQYMWPQCFGASLSSKDERTLRKNAAILPLYQIILVFILFIGFTALLQIPNLQGADTDLALFKIAKATFDPWVVGVI
GAAGILTALVPCSMLLLTASTILSKNIYRTMRPNTTDAQIGRLTRIFVPIVALIAVFFTFYGGSSIIALLIMAYSFVLQL
FPPLFCSLWKRNPINRVGAFAGIIAGVIVVAYITIKQATMGTFFPQAPQFIKDIDVGIAALVVNIVIMFVVSVVTNKGKE
KLEPEITLQKTV
>Mature_492_residues
MNSAIFILIGTFLLTFYLGMHARKGREMQLEQWAVGNRNFGSVIMFVLMAGEIFTTYVFLGGSGGAYRMGGPIIYIFNAF
CYIVPFWILPPIWRYAKKHTLLTQSDFFAKKYNSKPLGLLVAVVGIVSMIPYIVLQLKGLKIIVSEASYGMVSPNLAVWI
GMIAVTIFVSLSGIHGSASTAILKDILLLIVILFLGIYLPYHYYGGIKPMFETLDATKPEFLLIPKEGYSISWYISTCIT
IGLGQYMWPQCFGASLSSKDERTLRKNAAILPLYQIILVFILFIGFTALLQIPNLQGADTDLALFKIAKATFDPWVVGVI
GAAGILTALVPCSMLLLTASTILSKNIYRTMRPNTTDAQIGRLTRIFVPIVALIAVFFTFYGGSSIIALLIMAYSFVLQL
FPPLFCSLWKRNPINRVGAFAGIIAGVIVVAYITIKQATMGTFFPQAPQFIKDIDVGIAALVVNIVIMFVVSVVTNKGKE
KLEPEITLQKTV

Specific function: Catalyzes The Sodium-Dependent Uptake Of Extracellular Pantothenate. [C]

COG id: COG0591

COG function: function code ER; Na+/proline symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Escherichia coli, GI87082237, Length=467, Percent_Identity=20.9850107066381, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 54260; Mature: 54260

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAIFILIGTFLLTFYLGMHARKGREMQLEQWAVGNRNFGSVIMFVLMAGEIFTTYVFL
CCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEE
GGSGGAYRMGGPIIYIFNAFCYIVPFWILPPIWRYAKKHTLLTQSDFFAKKYNSKPLGLL
ECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH
VAVVGIVSMIPYIVLQLKGLKIIVSEASYGMVSPNLAVWIGMIAVTIFVSLSGIHGSAST
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
AILKDILLLIVILFLGIYLPYHYYGGIKPMFETLDATKPEFLLIPKEGYSISWYISTCIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHH
IGLGQYMWPQCFGASLSSKDERTLRKNAAILPLYQIILVFILFIGFTALLQIPNLQGADT
HHCCHHHCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DLALFKIAKATFDPWVVGVIGAAGILTALVPCSMLLLTASTILSKNIYRTMRPNTTDAQI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GRLTRIFVPIVALIAVFFTFYGGSSIIALLIMAYSFVLQLFPPLFCSLWKRNPINRVGAF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AGIIAGVIVVAYITIKQATMGTFFPQAPQFIKDIDVGIAALVVNIVIMFVVSVVTNKGKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KLEPEITLQKTV
HCCCCCEEEECC
>Mature Secondary Structure
MNSAIFILIGTFLLTFYLGMHARKGREMQLEQWAVGNRNFGSVIMFVLMAGEIFTTYVFL
CCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEE
GGSGGAYRMGGPIIYIFNAFCYIVPFWILPPIWRYAKKHTLLTQSDFFAKKYNSKPLGLL
ECCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHH
VAVVGIVSMIPYIVLQLKGLKIIVSEASYGMVSPNLAVWIGMIAVTIFVSLSGIHGSAST
HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHH
AILKDILLLIVILFLGIYLPYHYYGGIKPMFETLDATKPEFLLIPKEGYSISWYISTCIT
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCCCEEEHHHHHHHH
IGLGQYMWPQCFGASLSSKDERTLRKNAAILPLYQIILVFILFIGFTALLQIPNLQGADT
HHCCHHHCHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DLALFKIAKATFDPWVVGVIGAAGILTALVPCSMLLLTASTILSKNIYRTMRPNTTDAQI
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
GRLTRIFVPIVALIAVFFTFYGGSSIIALLIMAYSFVLQLFPPLFCSLWKRNPINRVGAF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AGIIAGVIVVAYITIKQATMGTFFPQAPQFIKDIDVGIAALVVNIVIMFVVSVVTNKGKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KLEPEITLQKTV
HCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; pantothenate [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + pantothenate [Periplasm] = Na (I) [Cytoplasm] + pantothenate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]