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The map label for this gene is yndF [H]

Identifier: 152974425

GI number: 152974425

Start: 680848

End: 681972

Strand: Direct

Name: yndF [H]

Synonym: Bcer98_0599

Alternate gene names: 152974425

Gene position: 680848-681972 (Clockwise)

Preceding gene: 152974424

Following gene: 152974429

Centisome position: 16.66

GC content: 34.58

Gene sequence:

>1125_bases
ATGAGTGGGTGCTCAGAGCGAAAAGAAATTGAAGAGAGAGGATTTGTTGTAGGGGCAGCATTTGATGTTGTGAAAGAAGA
AAGTGAAGAGAAGAAACCACCTCGTATGAAAGGAACGTATCAATTAGTTTTACCAAGTGCGTTAGCACAACAGGGGAAAC
AAGGTGCAGATGGGGCTCAGTATATGAATATCAATGTAACTGCGGATAGTCTTTTTACACAAATTCGTGAAGCATCCAAG
AAAATAAGTCGTTCTTTGTTTTTTCCTCATATTAAAGTTGTTATTTTTTCTAAAGATTTATTAAAGCGACAAAACTTTTT
AGAACAAACATTAGATATCTTTTTTCGTGCCCATGAAATGAGGCGGAATATTAAAATTTTTGTTTCGAAAAATCAAGCTG
GAAAAATTTTTGAACAAAATGCGAAACCAGAAAATTTTCCGGCAAAATATATTGATTTACTAGCGGATCATGCAGATGTG
AATTCATTTATGTTAGAGGCAGTTCGTATCGGAGAGGTTCAAGAAATGTTAACTTCTAAAAGAAGCTTTGTACTTCCAGT
TTTAGAGTTAACAAAGCAAGGGGTAAAGATGGAAGGAGCTGCTATTTTTAAGGGGGAGAATAATAAACTGGTCGGTCTTT
TAAGTGGAAAAGATACACAAGGATTAAATTATATAATAGGAAAGAAAGTGGGTGGATTTTTAACCATTCGAAAAAAAGAA
AAGGTATTTACGTATGAAATTCATAAAATAAGACGGAAAATCCGTGCTTCCTTTACAGATCCTCGTCATCCAAAGTTTAT
AATTGATATGTATCCTAAAGGTGTGCTTGGAGAAGTATATTTAGGAGAGGATGCAAAAGCATGGAGTGAGAAGCGAATAA
ATTCATACATTACAAAAGAGATGGAACGTATAGTGGGGAGAACAATAAAAAAAGTACAAAAAGAGTATAAAACGGATGTA
CTTGGATTAGGGGATTATTATAAACGGCATAATTATAAAAAGTGGAAAAAAGTAGAGAAGAATTGGGATTATGGGGAGAA
CTACTTTATGAAGACTGATATAGCAGTTCGTGTTCATCCGGTAGTAGAGCATTCTGGTTCATTAGTACCAAAAGGTGGTC
AGTAA

Upstream 100 bases:

>100_bases
ATTGTTCCTATACTTGTTTTTAGCATTTATAAAATAAAGGGGGGCGGAAAGAGTGAGCCGTCTTCATAAATACATGTGTT
GCGTTATGTTAGTGATCTGT

Downstream 100 bases:

>100_bases
TATGAAAATGCTTTCTACTTTAGCAATTATTAGTATGATTTTGATGGCTATTATTCCATACACAGTGTATTTTTTAAATA
AGAAAATAAAAAAATACACT

Product: spore germination B3 GerAC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSGCSERKEIEERGFVVGAAFDVVKEESEEKKPPRMKGTYQLVLPSALAQQGKQGADGAQYMNINVTADSLFTQIREASK
KISRSLFFPHIKVVIFSKDLLKRQNFLEQTLDIFFRAHEMRRNIKIFVSKNQAGKIFEQNAKPENFPAKYIDLLADHADV
NSFMLEAVRIGEVQEMLTSKRSFVLPVLELTKQGVKMEGAAIFKGENNKLVGLLSGKDTQGLNYIIGKKVGGFLTIRKKE
KVFTYEIHKIRRKIRASFTDPRHPKFIIDMYPKGVLGEVYLGEDAKAWSEKRINSYITKEMERIVGRTIKKVQKEYKTDV
LGLGDYYKRHNYKKWKKVEKNWDYGENYFMKTDIAVRVHPVVEHSGSLVPKGGQ

Sequences:

>Translated_374_residues
MSGCSERKEIEERGFVVGAAFDVVKEESEEKKPPRMKGTYQLVLPSALAQQGKQGADGAQYMNINVTADSLFTQIREASK
KISRSLFFPHIKVVIFSKDLLKRQNFLEQTLDIFFRAHEMRRNIKIFVSKNQAGKIFEQNAKPENFPAKYIDLLADHADV
NSFMLEAVRIGEVQEMLTSKRSFVLPVLELTKQGVKMEGAAIFKGENNKLVGLLSGKDTQGLNYIIGKKVGGFLTIRKKE
KVFTYEIHKIRRKIRASFTDPRHPKFIIDMYPKGVLGEVYLGEDAKAWSEKRINSYITKEMERIVGRTIKKVQKEYKTDV
LGLGDYYKRHNYKKWKKVEKNWDYGENYFMKTDIAVRVHPVVEHSGSLVPKGGQ
>Mature_373_residues
SGCSERKEIEERGFVVGAAFDVVKEESEEKKPPRMKGTYQLVLPSALAQQGKQGADGAQYMNINVTADSLFTQIREASKK
ISRSLFFPHIKVVIFSKDLLKRQNFLEQTLDIFFRAHEMRRNIKIFVSKNQAGKIFEQNAKPENFPAKYIDLLADHADVN
SFMLEAVRIGEVQEMLTSKRSFVLPVLELTKQGVKMEGAAIFKGENNKLVGLLSGKDTQGLNYIIGKKVGGFLTIRKKEK
VFTYEIHKIRRKIRASFTDPRHPKFIIDMYPKGVLGEVYLGEDAKAWSEKRINSYITKEMERIVGRTIKKVQKEYKTDVL
GLGDYYKRHNYKKWKKVEKNWDYGENYFMKTDIAVRVHPVVEHSGSLVPKGGQ

Specific function: May be involved in spore germination [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKC lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008844 [H]

Pfam domain/function: PF05504 Spore_GerAC [H]

EC number: NA

Molecular weight: Translated: 42926; Mature: 42795

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGCSERKEIEERGFVVGAAFDVVKEESEEKKPPRMKGTYQLVLPSALAQQGKQGADGAQ
CCCCHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHCCCCCCCCCE
YMNINVTADSLFTQIREASKKISRSLFFPHIKVVIFSKDLLKRQNFLEQTLDIFFRAHEM
EEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
RRNIKIFVSKNQAGKIFEQNAKPENFPAKYIDLLADHADVNSFMLEAVRIGEVQEMLTSK
CCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
RSFVLPVLELTKQGVKMEGAAIFKGENNKLVGLLSGKDTQGLNYIIGKKVGGFLTIRKKE
CHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECC
KVFTYEIHKIRRKIRASFTDPRHPKFIIDMYPKGVLGEVYLGEDAKAWSEKRINSYITKE
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHH
MERIVGRTIKKVQKEYKTDVLGLGDYYKRHNYKKWKKVEKNWDYGENYFMKTDIAVRVHP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCEEEEECEEEEEEE
VVEHSGSLVPKGGQ
EHHCCCCCCCCCCC
>Mature Secondary Structure 
SGCSERKEIEERGFVVGAAFDVVKEESEEKKPPRMKGTYQLVLPSALAQQGKQGADGAQ
CCCHHHHHHHHCCEEEEHHHHHHHHHHHHCCCCCCCCCEEEEECHHHHHCCCCCCCCCE
YMNINVTADSLFTQIREASKKISRSLFFPHIKVVIFSKDLLKRQNFLEQTLDIFFRAHEM
EEEEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHH
RRNIKIFVSKNQAGKIFEQNAKPENFPAKYIDLLADHADVNSFMLEAVRIGEVQEMLTSK
CCCEEEEEECCCCCCHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
RSFVLPVLELTKQGVKMEGAAIFKGENNKLVGLLSGKDTQGLNYIIGKKVGGFLTIRKKE
CHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECC
KVFTYEIHKIRRKIRASFTDPRHPKFIIDMYPKGVLGEVYLGEDAKAWSEKRINSYITKE
CCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHH
MERIVGRTIKKVQKEYKTDVLGLGDYYKRHNYKKWKKVEKNWDYGENYFMKTDIAVRVHP
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCEEEEECEEEEEEE
VVEHSGSLVPKGGQ
EHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]