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The map label for this gene is rex [H]

Identifier: 152974092

GI number: 152974092

Start: 266970

End: 267599

Strand: Direct

Name: rex [H]

Synonym: Bcer98_0248

Alternate gene names: 152974092

Gene position: 266970-267599 (Clockwise)

Preceding gene: 152974090

Following gene: 152974095

Centisome position: 6.53

GC content: 35.87

Gene sequence:

>630_bases
ATGGATCAGCAAAAGATTCCGCAGGCCACAGCCAAAAGATTGCCTCTATACTATCGATTTATCCAAAATTTATCTCTTTC
TGGTAAGCAACGTGTTTCATCAGCAGAATTGAGTGAAGCGGTGAAGGTAGATTCCGCAACAATTCGAAGAGATTTCTCAT
ATTTTGGAGCGTTAGGGAAAAAAGGATATGGATATAATGTAAACTATTTATTATCATTTTTCCGTGAAACGCTTGATCAA
GATGATATAACACGCGTGGCACTTATTGGAGTAGGGAATTTAGGGACCGCTTTCTTACATTACAATTTCACAAAAAATAA
TAATACGAAAATTGAAATGGCATTTGATGTCGATGAAGAGAAAGTGGGAAAAGAAATCGGAGGAATTCCTGTATATCATT
TGGATGAATTGGAAGAGCGACTAACGAATGATATACAAGTGGCAATACTAACAGTACCTGCTAACGTTGCACAAGCTGTA
GCAGATCGATTGGCTTATACAAGTGTACACGGTATTTTGAATTTTACACCGGCACGGTTAAATGTATCAGAAAAAATAAG
GATTCATCATATTGATTTAGCAGTAGAATTACAAACGCTTGTTTATTTTCTGAAAAATTATCCACAGTAA

Upstream 100 bases:

>100_bases
TTTTTCTTTCTTTCTTTATTATACAAGGAATGTTATAAGTGCTAAACTTTTGTATTTATTCCAAGTATACGAACAAAGAT
AGGAAGAGAGGAGAGGTTAT

Downstream 100 bases:

>100_bases
AACGCAGAGGAATCCCTCTGCGTTTTACTGTTTTTTCTTTATGAATTTAACTAAAATCAATCGAAGTGCTAGATTAAAGT
CAATTGTTGCCATAGCAGCG

Product: redox-sensing transcriptional repressor Rex

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MDQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQ
DDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVDEEKVGKEIGGIPVYHLDELEERLTNDIQVAILTVPANVAQAV
ADRLAYTSVHGILNFTPARLNVSEKIRIHHIDLAVELQTLVYFLKNYPQ

Sequences:

>Translated_209_residues
MDQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQ
DDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVDEEKVGKEIGGIPVYHLDELEERLTNDIQVAILTVPANVAQAV
ADRLAYTSVHGILNFTPARLNVSEKIRIHHIDLAVELQTLVYFLKNYPQ
>Mature_209_residues
MDQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVNYLLSFFRETLDQ
DDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVDEEKVGKEIGGIPVYHLDELEERLTNDIQVAILTVPANVAQAV
ADRLAYTSVHGILNFTPARLNVSEKIRIHHIDLAVELQTLVYFLKNYPQ

Specific function: Modulates transcription in response to changes in cellular NADH/NAD(+) redox state [H]

COG id: COG2344

COG function: function code R; AT-rich DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory rex family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003781
- InterPro:   IPR016040
- InterPro:   IPR009718
- InterPro:   IPR022876
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02629 CoA_binding; PF06971 Put_DNA-bind_N [H]

EC number: NA

Molecular weight: Translated: 23616; Mature: 23616

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGK
CCCCCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
KGYGYNVNYLLSFFRETLDQDDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVDEE
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEECCHH
KVGKEIGGIPVYHLDELEERLTNDIQVAILTVPANVAQAVADRLAYTSVHGILNFTPARL
HHHHHHCCCCEEHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC
NVSEKIRIHHIDLAVELQTLVYFLKNYPQ
CCCCEEEEEEEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDQQKIPQATAKRLPLYYRFIQNLSLSGKQRVSSAELSEAVKVDSATIRRDFSYFGALGK
CCCCCCCHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
KGYGYNVNYLLSFFRETLDQDDITRVALIGVGNLGTAFLHYNFTKNNNTKIEMAFDVDEE
CCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCEEEEEEEECCHH
KVGKEIGGIPVYHLDELEERLTNDIQVAILTVPANVAQAVADRLAYTSVHGILNFTPARL
HHHHHHCCCCEEHHHHHHHHHCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC
NVSEKIRIHHIDLAVELQTLVYFLKNYPQ
CCCCEEEEEEEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA