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The map label for this gene is yabB [H]

Identifier: 152973882

GI number: 152973882

Start: 39166

End: 39906

Strand: Direct

Name: yabB [H]

Synonym: Bcer98_0029

Alternate gene names: 152973882

Gene position: 39166-39906 (Clockwise)

Preceding gene: 152973881

Following gene: 152973883

Centisome position: 0.96

GC content: 34.41

Gene sequence:

>741_bases
ATGGAGTTATATGGAGATGAGCGTTTAGATTACTTACTAACTGAAGAGATGAAAATTATTCAAAGTCCGTCTGTATTTAA
TTTTTCTTTAGATGCAGTGTTACTTGCAAATTTCGTTTGGGTTCCGATTCAAAGAGGAAATTTGCTTGATTTATGTACGG
GGAATGCAGTCATTCCACTGTTATTAAGTAAAAGAACAAAAGGGAAAATCACTGGTGTAGAAATTCAAGAGCGATTATAT
GATATGGGAATAAGAAGTGTTCAATACAATCGTTTAGAAGAAAGAATTCATTTAATTCATGGGGATTTAAAGGATATGCC
GCAAACATTAGGGCATCATCAATATGATTTTGTTACGTGCAATCCTCCTTATTTTCAAACACCAAAATCATCGGAGAAAA
ATATAAATGAACATTTAGCAATCGCACGGCATGAAATTATGTGTACATTAGAAGATGTGGTACGTGCTAGTAGTCAATTG
GTGAAACAAGGCGGAAAAGTAGCTTTTGTACATCGACCAGGTCGATTGCTCGATATTGTAACGTTAATGAGGAAATATAA
AATTGAGCCAAAACGTGTACAATTTGTATATCCAAAAGCAGGTAAGGAAGCAAATACATTATTAATTGAAGGAATTAAGG
ATGGTAGCGCTGATCTGAAGATTTTACCACCGCTTTTTGTATATGATGAGAACAATGAATATACGAAGGAGATGCGCAGC
ATTTTGTATGGAGAAGAATAA

Upstream 100 bases:

>100_bases
ATTTTTTATACATGAGCGTAAGATTGGACAAAATAAACTTTAATTTTACGTTAATGGATAATGAAGTAGGATAGGTTAAT
TGAAAGAAAGGATATCATAT

Downstream 100 bases:

>100_bases
ACATTATTTTTATGTAGTGGAATGTTCAGACGGTAGCTATTATGCAGGTTATACAAATCATATAGAAAAGCGAATTCAGA
CTCATAACAATGGAAAGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MELYGDERLDYLLTEEMKIIQSPSVFNFSLDAVLLANFVWVPIQRGNLLDLCTGNAVIPLLLSKRTKGKITGVEIQERLY
DMGIRSVQYNRLEERIHLIHGDLKDMPQTLGHHQYDFVTCNPPYFQTPKSSEKNINEHLAIARHEIMCTLEDVVRASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVQFVYPKAGKEANTLLIEGIKDGSADLKILPPLFVYDENNEYTKEMRS
ILYGEE

Sequences:

>Translated_246_residues
MELYGDERLDYLLTEEMKIIQSPSVFNFSLDAVLLANFVWVPIQRGNLLDLCTGNAVIPLLLSKRTKGKITGVEIQERLY
DMGIRSVQYNRLEERIHLIHGDLKDMPQTLGHHQYDFVTCNPPYFQTPKSSEKNINEHLAIARHEIMCTLEDVVRASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVQFVYPKAGKEANTLLIEGIKDGSADLKILPPLFVYDENNEYTKEMRS
ILYGEE
>Mature_246_residues
MELYGDERLDYLLTEEMKIIQSPSVFNFSLDAVLLANFVWVPIQRGNLLDLCTGNAVIPLLLSKRTKGKITGVEIQERLY
DMGIRSVQYNRLEERIHLIHGDLKDMPQTLGHHQYDFVTCNPPYFQTPKSSEKNINEHLAIARHEIMCTLEDVVRASSQL
VKQGGKVAFVHRPGRLLDIVTLMRKYKIEPKRVQFVYPKAGKEANTLLIEGIKDGSADLKILPPLFVYDENNEYTKEMRS
ILYGEE

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 28264; Mature: 28264

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYGDERLDYLLTEEMKIIQSPSVFNFSLDAVLLANFVWVPIQRGNLLDLCTGNAVIPL
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEEEEECCCCEEEEECCCCEEEH
LLSKRTKGKITGVEIQERLYDMGIRSVQYNRLEERIHLIHGDLKDMPQTLGHHQYDFVTC
EECCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEE
NPPYFQTPKSSEKNINEHLAIARHEIMCTLEDVVRASSQLVKQGGKVAFVHRPGRLLDIV
CCCCCCCCCCCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
TLMRKYKIEPKRVQFVYPKAGKEANTLLIEGIKDGSADLKILPPLFVYDENNEYTKEMRS
HHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEECEEEEEECCCHHHHHHHH
ILYGEE
HHCCCC
>Mature Secondary Structure
MELYGDERLDYLLTEEMKIIQSPSVFNFSLDAVLLANFVWVPIQRGNLLDLCTGNAVIPL
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHEEEEEECCCCEEEEECCCCEEEH
LLSKRTKGKITGVEIQERLYDMGIRSVQYNRLEERIHLIHGDLKDMPQTLGHHQYDFVTC
EECCCCCCCEECHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEE
NPPYFQTPKSSEKNINEHLAIARHEIMCTLEDVVRASSQLVKQGGKVAFVHRPGRLLDIV
CCCCCCCCCCCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCEEEEECCCHHHHHH
TLMRKYKIEPKRVQFVYPKAGKEANTLLIEGIKDGSADLKILPPLFVYDENNEYTKEMRS
HHHHHHCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCEEEECEEEEEECCCHHHHHHHH
ILYGEE
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]