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The map label for this gene is yfiB [H]

Identifier: 152971453

GI number: 152971453

Start: 3217498

End: 3217881

Strand: Direct

Name: yfiB [H]

Synonym: KPN_02926

Alternate gene names: 152971453

Gene position: 3217498-3217881 (Clockwise)

Preceding gene: 152971452

Following gene: 152971461

Centisome position: 60.53

GC content: 57.81

Gene sequence:

>384_bases
ATGAAATCTTACGGCTTTACTGAAAGCAATGGCGATTGGTCCCTGGGCTTATCCGATAGCATCCTGTTTGACAAGAATGA
CTACCGACTACGTCCCGACAGCCGCCAGCAGATCACCACGATGGCCTCGCGGCTGGCGGCTACCGGGATCACCCATAGCC
GCCTTGAAGGCCATACCGATAATTATGGTGAAGATAGCTACAATGAAGCCCTGTCGCTTAAGCGGGCCAACAGCGTGGCC
GATGCCTGGGCGGAAGGCGCTCATGTCCCACGCAGTAATTTAGTCACCCGCGGCCTTGGCAAAAAATACCCGATCGCCAG
CAACGACACGGCGGCCGGGCGCGCCGAAAACCGCCGGGTAACGGTGGTCATCAGCACGCCGTAA

Upstream 100 bases:

>100_bases
TATGATCAGAAAATATTTCGTCCCCGCCCTGATGGCGGCGGCGCTTTTGACAGGTTGCCAGGCTCCTCAGGGAAAATTTA
CCCCCGAGCAGGTGGCGGCG

Downstream 100 bases:

>100_bases
GTCTTCACTTAGTCGCTGGACTTCATCATCCTCATTGCCGTTGCCGCGCGCCAGCGCAGGTAGTCAACGGCAATGAACAG
CAGCAGGCTGGCTCCCATTA

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MKSYGFTESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSYNEALSLKRANSVA
DAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVTVVISTP

Sequences:

>Translated_127_residues
MKSYGFTESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSYNEALSLKRANSVA
DAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVTVVISTP
>Mature_127_residues
MKSYGFTESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTDNYGEDSYNEALSLKRANSVA
DAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRVTVVISTP

Specific function: Unknown

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788957, Length=127, Percent_Identity=77.9527559055118, Blast_Score=218, Evalue=9e-59,
Organism=Escherichia coli, GI48994946, Length=120, Percent_Identity=36.6666666666667, Blast_Score=66, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 13918; Mature: 13918

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSYGFTESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTD
CCCCCCCCCCCCEEECCCCCEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCHHCCCCCC
NYGEDSYNEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
TVVISTP
EEEEECC
>Mature Secondary Structure
MKSYGFTESNGDWSLGLSDSILFDKNDYRLRPDSRQQITTMASRLAATGITHSRLEGHTD
CCCCCCCCCCCCEEECCCCCEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCHHCCCCCC
NYGEDSYNEALSLKRANSVADAWAEGAHVPRSNLVTRGLGKKYPIASNDTAAGRAENRRV
CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEE
TVVISTP
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 6357787; 9205837; 9278503; 6298574 [H]