Click here to switch to the map view.

The map label for this gene is yecO [H]

Identifier: 152970931

GI number: 152970931

Start: 2608112

End: 2608855

Strand: Direct

Name: yecO [H]

Synonym: KPN_02384

Alternate gene names: 152970931

Gene position: 2608112-2608855 (Clockwise)

Preceding gene: 152970930

Following gene: 152970932

Centisome position: 49.07

GC content: 56.18

Gene sequence:

>744_bases
ATGTCTCACCGCGATACGCTTTTTTCCGCGCCGATTGCCAGCCTCGGCGACTGGACCTTTGATGAACGGGTTGCTGAAGT
CTTCCCCGATATGATCCAGCGTTCTGTGCCCGGCTACTCCAATATCATCTCGATGATCGGCATGCTGGCCGAGCGCTTCG
TTCAGCCCAACACTCAGGTTTACGATCTTGGCTGTTCGCTGGGCGCCGCCACCCTCTCCGTGCGCCGCAATATTAGCCAT
CCGGACTGTCGCATTATCGCCATCGATAACTCGCCCGCGATGGTGGAGCGCTGCCGTCGCCATATTGACGCTTATAAAGC
GCCGACGCCGGTCGAAGTGATTGAAGGGGATATCCGCGACGTGACCATTGAAAACGCCTCGCTGGTGATCCTGAACTTTA
CTATTCAGTTCCTTGAGCCGGGCGATCGCCAGGCGATCCTCAATAAAGTCTATCAGGGGCTGAATCCGGGCGGCGCGCTA
GTGCTCTCGGAAAAATTCAGCTTCGAAGACGCCCACGTTGGCGAACTGTTGTTCAATATGCATCATGACTTTAAGCGCGC
CAACGGCTACAGCGAACTGGAGATCAGCCAGAAACGCAGCATGCTGGAAAATGTGATGCTGACGGACTCCGTCGAAACCC
ATAAAGCCCGCCTGCGTCAGGCTGGGTTTGAACATGCCGAACTGTGGTTCCAGTGCTTTAACTTTGGCTCGCTGGTGGCC
GTGAAAGCCGGGGAGCAGGCATGA

Upstream 100 bases:

>100_bases
GCTAATGGTGCTGGCCAATCTCTGGTATATGCCCTGGGAGTTGGTTTTCTCCCTCCGTTAGCGCACAATACGCCGTTTTC
GTTTTTTCGGGTTTAACGTT

Downstream 100 bases:

>100_bases
TCGACTTCAGTAACTTCTATCAGCTGATCGCCAAAAGCCCGCTGTCTCACTGGCTGGAGACGCTGCCTGCCCAGGTAGCC
GCCTGGCAGCGCGATGCCCT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSHRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQVYDLGCSLGAATLSVRRNISH
PDCRIIAIDNSPAMVERCRRHIDAYKAPTPVEVIEGDIRDVTIENASLVILNFTIQFLEPGDRQAILNKVYQGLNPGGAL
VLSEKFSFEDAHVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHAELWFQCFNFGSLVA
VKAGEQA

Sequences:

>Translated_247_residues
MSHRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQVYDLGCSLGAATLSVRRNISH
PDCRIIAIDNSPAMVERCRRHIDAYKAPTPVEVIEGDIRDVTIENASLVILNFTIQFLEPGDRQAILNKVYQGLNPGGAL
VLSEKFSFEDAHVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHAELWFQCFNFGSLVA
VKAGEQA
>Mature_246_residues
SHRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQVYDLGCSLGAATLSVRRNISHP
DCRIIAIDNSPAMVERCRRHIDAYKAPTPVEVIEGDIRDVTIENASLVILNFTIQFLEPGDRQAILNKVYQGLNPGGALV
LSEKFSFEDAHVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHAELWFQCFNFGSLVAV
KAGEQA

Specific function: Catalyzes the conversion of 5-methoxyuridine (mo5U) to uridine-5-oxyacetic acid (cmo5U) at position 34 in tRNA. May also participate in the methylation of uridine-5-oxyacetic acid (cmo5U) to uridine-5-oxyacetic acid methyl ester (mcmo5U) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoA family [H]

Homologues:

Organism=Escherichia coli, GI1788177, Length=247, Percent_Identity=89.4736842105263, Blast_Score=472, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216
- InterPro:   IPR005271 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 27690; Mature: 27559

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQV
CCCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
YDLGCSLGAATLSVRRNISHPDCRIIAIDNSPAMVERCRRHIDAYKAPTPVEVIEGDIRD
EECCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCE
VTIENASLVILNFTIQFLEPGDRQAILNKVYQGLNPGGALVLSEKFSFEDAHVGELLFNM
EEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH
HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHAELWFQCFNFGSLVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE
VKAGEQA
EECCCCC
>Mature Secondary Structure 
SHRDTLFSAPIASLGDWTFDERVAEVFPDMIQRSVPGYSNIISMIGMLAERFVQPNTQV
CCCHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
YDLGCSLGAATLSVRRNISHPDCRIIAIDNSPAMVERCRRHIDAYKAPTPVEVIEGDIRD
EECCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHCCCCCE
VTIENASLVILNFTIQFLEPGDRQAILNKVYQGLNPGGALVLSEKFSFEDAHVGELLFNM
EEECCCEEEEEEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH
HHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLRQAGFEHAELWFQCFNFGSLVA
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCEEE
VKAGEQA
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA