| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is codA [H]
Identifier: 152970585
GI number: 152970585
Start: 2230918
End: 2232201
Strand: Direct
Name: codA [H]
Synonym: KPN_02036
Alternate gene names: 152970585
Gene position: 2230918-2232201 (Clockwise)
Preceding gene: 152970584
Following gene: 152970586
Centisome position: 41.97
GC content: 68.46
Gene sequence:
>1284_bases ATGACGCTCCCCTCCTCTTGTGCGCCGCTCACCGGCATCAGCCGCGCCCGACTCCCGGCCTGGGCGCTGCCCGACGGCTG GCCGACGCAGGCCAACGGTGAACCGCTGCTGGCGGACCTGGCCTTTCGCGACGGCCGGATCGCCGCACTGACCCCAACCG ACCAGCCGACTCCCGGCCTGTGGGACCTGGCGGGAGCCCTGACGCTCCCCGGCCTGGTGGAACCCCATGCCCATCTGGAC AAGACATTCACCATTGAACGCTGCCGTCCAGCGCAGGCCGGGCTGCTGCCGGCGATCCACGCCATGCATGAGGATCGCCG ACACTGGTCCAGGGCGGATATTCAACGCCGGGCGTCCGCCGCGCTGGCCCGGGCGGCAGCGAATGGCGTGACCCATTTGC GCAGCCATATCGACTGGTTTAACGCCGACGCGCCGGACGCCTGGCAGGAAATCGCCCGCCTCGATACCGTCGGCATCACC CTGGAGCGGGTGGCGCTGGTCCCGCTGCCCCTGTTTCGCGAGCTGGCGCAAGCGGAGGCCATCGCCCGGACGGTCGCCAA CAGCGGAGAGCGCTGCCTGCTGGGCGGCTTCATCCACTCCTCCAACTGGGACGCCACCGCCATGGAAAATCTGCTGTACA GCGCGGCCCGCTGGGATCTGGATCTGGATTTGCATATTGATGAGGAGCTCAGCGAAGTGTCTCAGGGGCTGACCTGGCTG GCGGATCATCTCTCCCGCCACCCTTTTCCCGGGCATATCTGCTGCAGCCACGGCTGCGCACTGGCCGCCGGCAGCGACGA ACAGGCGGCGCCGATCCTGCGCCAGCTGGCGGCGCACGGCGTCACCCTTATCGCTCTGCCGATGACCAACCTGCTGCTGC AGGATGCGACGTTCGGCCGCACGCCGCGCCAGCGGGGGATCACCCTGCTGCACGAGGCGCAGGCCGCCGGCGTGGCCACC CTGCTCGGCTGCGACAACGTGCAGGATGCCTTCTGCCCGGCGGGGAGCTATGACCCGCTGGACACCCTGGCCTGCGGTCT GTTCAGCGCTCAGCTCAGCGACCTGTTCGACCAGCAGTCGCGGCTGATCTGCGATCGCGCGGCGCTAACCGGTTCGCCGG CAGACGCGGCGCCCTTTGCCGTCGGAGCGGCGGCCAGCGTGGTGATTTTCCCGGGTAGCGACCGTTTTACCTGGCCTTTA AACAGCGCCGCCCGTCTGGTGGTTAACCACGGCAGGTTAACCCACCGGCGCGTGTGGCAGGAGGAGATGGCACATGAGTC TTGA
Upstream 100 bases:
>100_bases TGCTGACGGCGGAAGAGAAAGCCGGCAACGACCAGATCACGCTCTGCTGTTCGCGGGCGAAATCGCCGGGTCTGGTTTTG GATCTGTGAGGAGACTGACG
Downstream 100 bases:
>100_bases AGCAGGCGCCGGGGCGCCGCTGGCGCGGTATGCCGCCTGGCGCAGAGCCGGCGATTTTATCTTTCTCTCCGGCATTATTC CGGTCAATCCCCTGACCGGC
Product: putative cytosine deaminase
Products: NA
Alternate protein names: Cytosine aminohydrolase [H]
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MTLPSSCAPLTGISRARLPAWALPDGWPTQANGEPLLADLAFRDGRIAALTPTDQPTPGLWDLAGALTLPGLVEPHAHLD KTFTIERCRPAQAGLLPAIHAMHEDRRHWSRADIQRRASAALARAAANGVTHLRSHIDWFNADAPDAWQEIARLDTVGIT LERVALVPLPLFRELAQAEAIARTVANSGERCLLGGFIHSSNWDATAMENLLYSAARWDLDLDLHIDEELSEVSQGLTWL ADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGRTPRQRGITLLHEAQAAGVAT LLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQSRLICDRAALTGSPADAAPFAVGAAASVVIFPGSDRFTWPL NSAARLVVNHGRLTHRRVWQEEMAHES
Sequences:
>Translated_427_residues MTLPSSCAPLTGISRARLPAWALPDGWPTQANGEPLLADLAFRDGRIAALTPTDQPTPGLWDLAGALTLPGLVEPHAHLD KTFTIERCRPAQAGLLPAIHAMHEDRRHWSRADIQRRASAALARAAANGVTHLRSHIDWFNADAPDAWQEIARLDTVGIT LERVALVPLPLFRELAQAEAIARTVANSGERCLLGGFIHSSNWDATAMENLLYSAARWDLDLDLHIDEELSEVSQGLTWL ADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGRTPRQRGITLLHEAQAAGVAT LLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQSRLICDRAALTGSPADAAPFAVGAAASVVIFPGSDRFTWPL NSAARLVVNHGRLTHRRVWQEEMAHES >Mature_426_residues TLPSSCAPLTGISRARLPAWALPDGWPTQANGEPLLADLAFRDGRIAALTPTDQPTPGLWDLAGALTLPGLVEPHAHLDK TFTIERCRPAQAGLLPAIHAMHEDRRHWSRADIQRRASAALARAAANGVTHLRSHIDWFNADAPDAWQEIARLDTVGITL ERVALVPLPLFRELAQAEAIARTVANSGERCLLGGFIHSSNWDATAMENLLYSAARWDLDLDLHIDEELSEVSQGLTWLA DHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGRTPRQRGITLLHEAQAAGVATL LGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQSRLICDRAALTGSPADAAPFAVGAAASVVIFPGSDRFTWPLN SAARLVVNHGRLTHRRVWQEEMAHES
Specific function: Unknown
COG id: COG0402
COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786531, Length=404, Percent_Identity=26.980198019802, Blast_Score=111, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: =3.5.4.1 [H]
Molecular weight: Translated: 46044; Mature: 45912
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLPSSCAPLTGISRARLPAWALPDGWPTQANGEPLLADLAFRDGRIAALTPTDQPTPGL CCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCH WDLAGALTLPGLVEPHAHLDKTFTIERCRPAQAGLLPAIHAMHEDRRHWSRADIQRRASA HHHHHHHCCCCCCCCHHHCCCEEECCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ALARAAANGVTHLRSHIDWFNADAPDAWQEIARLDTVGITLERVALVPLPLFRELAQAEA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHH IARTVANSGERCLLGGFIHSSNWDATAMENLLYSAARWDLDLDLHIDEELSEVSQGLTWL HHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH ADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGR HHHHHCCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCC TPRQRGITLLHEAQAAGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQS CCHHHCCEEEEHHHHCCEEHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLICDRAALTGSPADAAPFAVGAAASVVIFPGSDRFTWPLNSAARLVVNHGRLTHRRVWQ HHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCEEECCCCHHHHHECCCCHHHHHHHH EEMAHES HHHCCCC >Mature Secondary Structure TLPSSCAPLTGISRARLPAWALPDGWPTQANGEPLLADLAFRDGRIAALTPTDQPTPGL CCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCH WDLAGALTLPGLVEPHAHLDKTFTIERCRPAQAGLLPAIHAMHEDRRHWSRADIQRRASA HHHHHHHCCCCCCCCHHHCCCEEECCCCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHH ALARAAANGVTHLRSHIDWFNADAPDAWQEIARLDTVGITLERVALVPLPLFRELAQAEA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHH IARTVANSGERCLLGGFIHSSNWDATAMENLLYSAARWDLDLDLHIDEELSEVSQGLTWL HHHHHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHH ADHLSRHPFPGHICCSHGCALAAGSDEQAAPILRQLAAHGVTLIALPMTNLLLQDATFGR HHHHHCCCCCCCEECCCCCEEECCCCHHHHHHHHHHHHCCEEEEEEHHHHHHHHCCCCCC TPRQRGITLLHEAQAAGVATLLGCDNVQDAFCPAGSYDPLDTLACGLFSAQLSDLFDQQS CCHHHCCEEEEHHHHCCEEHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH RLICDRAALTGSPADAAPFAVGAAASVVIFPGSDRFTWPLNSAARLVVNHGRLTHRRVWQ HHHHHHHHCCCCCCCCCCEEECCCEEEEEECCCCCEEECCCCHHHHHECCCCHHHHHHHH EEMAHES HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1640834; 8450832; 9278503 [H]