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The map label for this gene is pcaH [H]

Identifier: 152970500

GI number: 152970500

Start: 2145932

End: 2146672

Strand: Direct

Name: pcaH [H]

Synonym: KPN_01948

Alternate gene names: 152970500

Gene position: 2145932-2146672 (Clockwise)

Preceding gene: 152970497

Following gene: 152970501

Centisome position: 40.37

GC content: 58.7

Gene sequence:

>741_bases
ATGAACGACAAATGGTCCCCACGTGAGGTTGTCCATCGCGATTACAGTAGCCACCCGCCCGCTTACGCGCCGGGCTATAA
AACCAGCGTCCTGCGCTCGCCAAAAAACGCCCTCATCTCTCTGCAGAACTCGCTGTCAGAGATCACCGGCCCGGTATTTA
GCCACGACGACCTCGGCCCTCTGGATAATGACCTAATCCTGAACTATGCCAAAGAAGGCCTGCCTATCGGCGAGCGGATC
ATCGTCCACGGTTACGTGCGCGATGGATTCGGCCGACCGATGAAAAATACGCTGGTGGAAGTCTGGCAAGCCAATGCTGG
CGGTCGCTACCGGCATAAAAAAGATCAGTATCTGGCGCCGATTGACCCGAACTTTGGCGGCTGCGGCCGGATGCTTACCG
ATGAAAACGGCTATTACTGTTTTCGCACCATCAAACCCGGCCCCTACCCCTGGCGCAACCAGGCCAGCGACTGGCGTCCG
GCGCATATCCATTTTTCTCTCTCGGGCGACGCCTGGGCCCAGCGCCTGATCACCCAGATGTATTTTGAAGGCGACCCGCT
GATTAAGCAGTGCCCGATCGTCAGGACTATTAAGAATGACGACGCCGTGCGCACGCTGATCGCCGAGCTGGACATGCACG
CCGCCGTACCGCTGGATTGTTTGGCCTACCGCTTCGACCTTGTTCTGCGCGGCCACCGCGCCACGCTGTTTGAAAATCGC
ACTCAGGGGGCCGCCCGATGA

Upstream 100 bases:

>100_bases
ACACCCGGTAATTTCACTTTAAATTAACAATACATTTACACACACTGCTTCTGTCGACATTACAACAATATGCCCCTCTA
CCGTCTACACGGAGTACCCT

Downstream 100 bases:

>100_bases
AAGAGTATCTGCCTGAAACCGCCTCGCAGACGGCGGGACCCTATGTTCATATCGGCCTGGCGCCGGACGCCGCAGGCTTT
CATATTTTTGAGAAAAATTT

Product: putative oxidoreductase

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MNDKWSPREVVHRDYSSHPPAYAPGYKTSVLRSPKNALISLQNSLSEITGPVFSHDDLGPLDNDLILNYAKEGLPIGERI
IVHGYVRDGFGRPMKNTLVEVWQANAGGRYRHKKDQYLAPIDPNFGGCGRMLTDENGYYCFRTIKPGPYPWRNQASDWRP
AHIHFSLSGDAWAQRLITQMYFEGDPLIKQCPIVRTIKNDDAVRTLIAELDMHAAVPLDCLAYRFDLVLRGHRATLFENR
TQGAAR

Sequences:

>Translated_246_residues
MNDKWSPREVVHRDYSSHPPAYAPGYKTSVLRSPKNALISLQNSLSEITGPVFSHDDLGPLDNDLILNYAKEGLPIGERI
IVHGYVRDGFGRPMKNTLVEVWQANAGGRYRHKKDQYLAPIDPNFGGCGRMLTDENGYYCFRTIKPGPYPWRNQASDWRP
AHIHFSLSGDAWAQRLITQMYFEGDPLIKQCPIVRTIKNDDAVRTLIAELDMHAAVPLDCLAYRFDLVLRGHRATLFENR
TQGAAR
>Mature_246_residues
MNDKWSPREVVHRDYSSHPPAYAPGYKTSVLRSPKNALISLQNSLSEITGPVFSHDDLGPLDNDLILNYAKEGLPIGERI
IVHGYVRDGFGRPMKNTLVEVWQANAGGRYRHKKDQYLAPIDPNFGGCGRMLTDENGYYCFRTIKPGPYPWRNQASDWRP
AHIHFSLSGDAWAQRLITQMYFEGDPLIKQCPIVRTIKNDDAVRTLIAELDMHAAVPLDCLAYRFDLVLRGHRATLFENR
TQGAAR

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 27923; Mature: 27923

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKWSPREVVHRDYSSHPPAYAPGYKTSVLRSPKNALISLQNSLSEITGPVFSHDDLGP
CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
LDNDLILNYAKEGLPIGERIIVHGYVRDGFGRPMKNTLVEVWQANAGGRYRHKKDQYLAP
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECC
IDPNFGGCGRMLTDENGYYCFRTIKPGPYPWRNQASDWRPAHIHFSLSGDAWAQRLITQM
CCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHH
YFEGDPLIKQCPIVRTIKNDDAVRTLIAELDMHAAVPLDCLAYRFDLVLRGHRATLFENR
HCCCCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCC
TQGAAR
CCCCCC
>Mature Secondary Structure
MNDKWSPREVVHRDYSSHPPAYAPGYKTSVLRSPKNALISLQNSLSEITGPVFSHDDLGP
CCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCC
LDNDLILNYAKEGLPIGERIIVHGYVRDGFGRPMKNTLVEVWQANAGGRYRHKKDQYLAP
CCCHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECC
IDPNFGGCGRMLTDENGYYCFRTIKPGPYPWRNQASDWRPAHIHFSLSGDAWAQRLITQM
CCCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHH
YFEGDPLIKQCPIVRTIKNDDAVRTLIAELDMHAAVPLDCLAYRFDLVLRGHRATLFENR
HCCCCCHHHHCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHCCC
TQGAAR
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2298704; 8063101 [H]