| Definition | Klebsiella pneumoniae subsp. pneumoniae MGH 78578 chromosome, complete genome. |
|---|---|
| Accession | NC_009648 |
| Length | 5,315,120 |
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The map label for this gene is gsiB [H]
Identifier: 152970406
GI number: 152970406
Start: 2043490
End: 2045112
Strand: Direct
Name: gsiB [H]
Synonym: KPN_01854
Alternate gene names: 152970406
Gene position: 2043490-2045112 (Clockwise)
Preceding gene: 152970405
Following gene: 152970407
Centisome position: 38.45
GC content: 60.75
Gene sequence:
>1623_bases ATGCATCGTCATTTTCGCCTGCCCGCGCTGGCCGCGCTGTTTCTCACCGGCGCCTTTTCCGTCTGGGCCGCCGACACGCC GGTTAAAGGCGGCACCTTAATTTATCTGGAGCAGCAACCGCACACCAATCTCTATCCGCCCGCCGGCGGCTTTTACCCGA ATGGCGGGATTCTCAATCAGATAACCGACAAGCTCACCTGGCAGAACCCGAAAACGCTGGAGATTGAGCCGTGGATCGCC GAGAGCTGGACCAGCAATGCCGATAAAACCGAGTACACTTTCCACCTGCGCAAAGGGGTCACTTTCTCAGATGGCACACC GCTGGACGCCGCCGCCGTCGCCAAAAACTTCGATACCTATGGTCTGGGAGATAAAGCCCATCGTCTGCCCGTCTCGGAGG TCATCAATAACTACCAGCGCAGCGAAGTGATCGACCCGCTGACGGTAAAATTCTACTTCAACAAGCCGTCGCCGGGCTTC CTGCAGGGAACCGCCACCATCGGCTCCGGTCTGGTATCTCTCAGCACCCTGCAGCGTAATTTTGAAGAGCTGGGCGATGC CCGACATATTATCGGCTCCGGCCCCTTCGTCGTGCAGGATGAAAAACCAGGCCGCGAGCTGACGCTGGTGGCGCGCAAGG ATTACCAGTGGGGGCCGAAAAACATTGCCCAGCAGGGGCCCGCTAACCTCGACGGCATCACCTATATTGTGACGCCGGAA GACAGCGTGCGTATCGGCGCGCTGCTGGCAGGTCAGGCGGGCTTTATTCGCCAGGTGCAGGCCTACGATGAAAAGCAGGC TACCGATCAGGGATTTAAGATCTACGCTGCCCCTACCCGCGGGGTCAACGACAGCCTGAGCTTCCGCCCGGATAACCCAC TGGTCGCCGACCTGCGGGTGCGTCAGGCCCTGCTCCATGCCACCAACGCCAGGCAGGTGGTGGAGACGCTGTTCTCCGCT AACTACCCGCAAGCCACCTCCGTGCTGGCCAGCTCTGCCGCCGGCTATGTCAATCTCAGCGATAAACTCACCTTCGACCA GGCCAAAGCCCGGCAGTTGCTGGATGACGCCGGCTGGAAGCCCGCCGCCGACGGTATTCGCAGCAAAGACGGTCAGCGGC TGGCGCTGACCGTTTATGAGTCGCTGCCGCAGCCGCAAAATAAGGAAGTGCTGCAGCTGATCGCCCAGCAGTGGCGCCAG GTGGGTGTGGCGTTGACGGTCAAAGCCGGGGATGCCGGTAGCCGTACGCTGGATAACCTCGACCCGCAGAAAACCCCGCT CACCGTCTCAGAAGTGGGCCGCGCCGACCCGGATGTGGTGAAAAGTATGTTCTTCCCCAACAACCGCGATGCGCTGCTGC AGAAAGGCGGCTCCAGCGATAAAGTGCAGCGCTTCCGCGATGATAAGCTCAATGACCTGCTGACCGGCATCTCCGCGGCG GTTGAACCGCAGCAGCGCTTGCAGTTAACCGGTGACGCCCAGCGCTATCTGATCGATAACGCCTATGTGATCCCTATTTT CGAAGAGCCGCAGGTGTTCGCCGGCGCGCCGTGGGTCAAAGGCGTCAGCTTCGAGGCCGTCGGTCGTCCGTCGTTCTACG GCGCGTGGCTGGACAAGCACTAA
Upstream 100 bases:
>100_bases GTAAATGCAATTTCCGCAAATGCTTAGCGCAATTCCTTGGTTCCTTTGTTTTTAGCCGCGCCCGATGATGGCAACACAAT AGATAACAAAGGAATTCACC
Downstream 100 bases:
>100_bases GAGGCCGGTTATGAGCGCTTATCTTCTGCGACGATTCGGCCAGGGGCTGCTGGTCCTGTGGGCGGCCTTTACCCTCACCT TTTTCCTGCTGCAGGTCCTG
Product: nickel ABC transporter periplasmic substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 540; Mature: 540
Protein sequence:
>540_residues MHRHFRLPALAALFLTGAFSVWAADTPVKGGTLIYLEQQPHTNLYPPAGGFYPNGGILNQITDKLTWQNPKTLEIEPWIA ESWTSNADKTEYTFHLRKGVTFSDGTPLDAAAVAKNFDTYGLGDKAHRLPVSEVINNYQRSEVIDPLTVKFYFNKPSPGF LQGTATIGSGLVSLSTLQRNFEELGDARHIIGSGPFVVQDEKPGRELTLVARKDYQWGPKNIAQQGPANLDGITYIVTPE DSVRIGALLAGQAGFIRQVQAYDEKQATDQGFKIYAAPTRGVNDSLSFRPDNPLVADLRVRQALLHATNARQVVETLFSA NYPQATSVLASSAAGYVNLSDKLTFDQAKARQLLDDAGWKPAADGIRSKDGQRLALTVYESLPQPQNKEVLQLIAQQWRQ VGVALTVKAGDAGSRTLDNLDPQKTPLTVSEVGRADPDVVKSMFFPNNRDALLQKGGSSDKVQRFRDDKLNDLLTGISAA VEPQQRLQLTGDAQRYLIDNAYVIPIFEEPQVFAGAPWVKGVSFEAVGRPSFYGAWLDKH
Sequences:
>Translated_540_residues MHRHFRLPALAALFLTGAFSVWAADTPVKGGTLIYLEQQPHTNLYPPAGGFYPNGGILNQITDKLTWQNPKTLEIEPWIA ESWTSNADKTEYTFHLRKGVTFSDGTPLDAAAVAKNFDTYGLGDKAHRLPVSEVINNYQRSEVIDPLTVKFYFNKPSPGF LQGTATIGSGLVSLSTLQRNFEELGDARHIIGSGPFVVQDEKPGRELTLVARKDYQWGPKNIAQQGPANLDGITYIVTPE DSVRIGALLAGQAGFIRQVQAYDEKQATDQGFKIYAAPTRGVNDSLSFRPDNPLVADLRVRQALLHATNARQVVETLFSA NYPQATSVLASSAAGYVNLSDKLTFDQAKARQLLDDAGWKPAADGIRSKDGQRLALTVYESLPQPQNKEVLQLIAQQWRQ VGVALTVKAGDAGSRTLDNLDPQKTPLTVSEVGRADPDVVKSMFFPNNRDALLQKGGSSDKVQRFRDDKLNDLLTGISAA VEPQQRLQLTGDAQRYLIDNAYVIPIFEEPQVFAGAPWVKGVSFEAVGRPSFYGAWLDKH >Mature_540_residues MHRHFRLPALAALFLTGAFSVWAADTPVKGGTLIYLEQQPHTNLYPPAGGFYPNGGILNQITDKLTWQNPKTLEIEPWIA ESWTSNADKTEYTFHLRKGVTFSDGTPLDAAAVAKNFDTYGLGDKAHRLPVSEVINNYQRSEVIDPLTVKFYFNKPSPGF LQGTATIGSGLVSLSTLQRNFEELGDARHIIGSGPFVVQDEKPGRELTLVARKDYQWGPKNIAQQGPANLDGITYIVTPE DSVRIGALLAGQAGFIRQVQAYDEKQATDQGFKIYAAPTRGVNDSLSFRPDNPLVADLRVRQALLHATNARQVVETLFSA NYPQATSVLASSAAGYVNLSDKLTFDQAKARQLLDDAGWKPAADGIRSKDGQRLALTVYESLPQPQNKEVLQLIAQQWRQ VGVALTVKAGDAGSRTLDNLDPQKTPLTVSEVGRADPDVVKSMFFPNNRDALLQKGGSSDKVQRFRDDKLNDLLTGISAA VEPQQRLQLTGDAQRYLIDNAYVIPIFEEPQVFAGAPWVKGVSFEAVGRPSFYGAWLDKH
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=353, Percent_Identity=29.4617563739377, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1789887, Length=444, Percent_Identity=27.027027027027, Blast_Score=100, Evalue=3e-22, Organism=Escherichia coli, GI1789966, Length=496, Percent_Identity=23.1854838709677, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787762, Length=473, Percent_Identity=24.1014799154334, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787551, Length=515, Percent_Identity=22.3300970873786, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 59294; Mature: 59294
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRHFRLPALAALFLTGAFSVWAADTPVKGGTLIYLEQQPHTNLYPPAGGFYPNGGILNQ CCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH ITDKLTWQNPKTLEIEPWIAESWTSNADKTEYTFHLRKGVTFSDGTPLDAAAVAKNFDTY HHHHHCCCCCCEEEECCCHHHCCCCCCCCCEEEEEEECCCEECCCCCCHHHHHHHCCCCC GLGDKAHRLPVSEVINNYQRSEVIDPLTVKFYFNKPSPGFLQGTATIGSGLVSLSTLQRN CCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH FEELGDARHIIGSGPFVVQDEKPGRELTLVARKDYQWGPKNIAQQGPANLDGITYIVTPE HHHHCCHHEECCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCEEEEECCC DSVRIGALLAGQAGFIRQVQAYDEKQATDQGFKIYAAPTRGVNDSLSFRPDNPLVADLRV CCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH RQALLHATNARQVVETLFSANYPQATSVLASSAAGYVNLSDKLTFDQAKARQLLDDAGWK HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCC PAADGIRSKDGQRLALTVYESLPQPQNKEVLQLIAQQWRQVGVALTVKAGDAGSRTLDNL CCCCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC DPQKTPLTVSEVGRADPDVVKSMFFPNNRDALLQKGGSSDKVQRFRDDKLNDLLTGISAA CCCCCCEEHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VEPQQRLQLTGDAQRYLIDNAYVIPIFEEPQVFAGAPWVKGVSFEAVGRPSFYGAWLDKH CCHHHHEEECCCCCEEEECCEEEEEEECCCCEEECCCCCCCCCEEECCCCCEECCCCCCC >Mature Secondary Structure MHRHFRLPALAALFLTGAFSVWAADTPVKGGTLIYLEQQPHTNLYPPAGGFYPNGGILNQ CCCCCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH ITDKLTWQNPKTLEIEPWIAESWTSNADKTEYTFHLRKGVTFSDGTPLDAAAVAKNFDTY HHHHHCCCCCCEEEECCCHHHCCCCCCCCCEEEEEEECCCEECCCCCCHHHHHHHCCCCC GLGDKAHRLPVSEVINNYQRSEVIDPLTVKFYFNKPSPGFLQGTATIGSGLVSLSTLQRN CCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHH FEELGDARHIIGSGPFVVQDEKPGRELTLVARKDYQWGPKNIAQQGPANLDGITYIVTPE HHHHCCHHEECCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHCCCCCCCCEEEEECCC DSVRIGALLAGQAGFIRQVQAYDEKQATDQGFKIYAAPTRGVNDSLSFRPDNPLVADLRV CCEEEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHH RQALLHATNARQVVETLFSANYPQATSVLASSAAGYVNLSDKLTFDQAKARQLLDDAGWK HHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCC PAADGIRSKDGQRLALTVYESLPQPQNKEVLQLIAQQWRQVGVALTVKAGDAGSRTLDNL CCCCCCCCCCCCEEEEEEEHHCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC DPQKTPLTVSEVGRADPDVVKSMFFPNNRDALLQKGGSSDKVQRFRDDKLNDLLTGISAA CCCCCCEEHHHHCCCCHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH VEPQQRLQLTGDAQRYLIDNAYVIPIFEEPQVFAGAPWVKGVSFEAVGRPSFYGAWLDKH CCHHHHEEECCCCCEEEECCEEEEEEECCCCEEECCCCCCCCCEEECCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA