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The map label for this gene is pqqE [H]

Identifier: 152970364

GI number: 152970364

Start: 2000973

End: 2002115

Strand: Direct

Name: pqqE [H]

Synonym: KPN_01812

Alternate gene names: 152970364

Gene position: 2000973-2002115 (Clockwise)

Preceding gene: 152970363

Following gene: 152970365

Centisome position: 37.65

GC content: 61.5

Gene sequence:

>1143_bases
GTGAACCAGAGTAAACCCACCGTCAATCCGCCGCTGTGGCTGCTGGCGGAGCTGACCTACCGCTGCCCGCTGCAGTGTCC
CTACTGTTCCAATCCGCTGGACTTCGCCCGGCAGGATAAGGAGCTGACCACCGAACAATGGATCGAGGTCTTTCGCCAGG
CGCGGGCGATGGGCAGCGTTCAGCTGGGCTTTTCCGGCGGCGAGCCGCTGACCCGTAAAGATCTGCCGGAGCTGATCCGC
GCCGCGCGCGACCTCGGGTTCTATACCAACCTGATCACCTCCGGGATAGGGCTGACGGAGAGCAAACTGGACGCCTTCAG
CGAGGCCGGGCTGGACCATATCCAGATTAGCTTCCAGGCCAGCGATGAAGTGCTCAACGCCGCGCTGGCCGGCAACAAAA
AAGCCTTCCAGCAGAAGCTGACCATGGCCAAAGCCGTGAAAGCGCGCGACTACCCGATGGTGCTCAACTTCGTTCTCCAC
CGGCACAACATCGACCAGCTCGATAAAATTATCGAGCTGTGCATTGAGCTGGAAGCCGATGACGTTGAGCTGGCCACCTG
CCAGTTCTACGGGTGGGCGTTTCTTAATCGCGAAGGGCTGCTGCCGACCCGGGAACAGATCGCCCGCGCCGAGCAGGTGG
TCGCTGACTACCGGCAGAAAATGGCCGCCAGCGGCAACCTCACCAACCTGCTGTTCGTCACCCCGGACTATTACGAAGAG
CGGCCGAAAGGCTGCATGGGCGGCTGGGGATCGATTTTCCTCAGCGTCACCCCGGAAGGCACCGCCCTGCCTTGCCACAG
CGCGCGCCAGCTGCCGGTGGCATTTCCGTCGGTGCTGGAGCAGAGTCTGGAATCGATCTGGTATGACTCATTCGGCTTCA
ATCGCTACCGCGGGTATGACTGGATGCCGGAGCCGTGCCGCTCCTGTGATGAAAAAGAGAAGGACTTCGGCGGCTGCCGC
TGCCAGGCCTTTATGCTGACCGGCAGCGCCGATAACGCCGACCCGGTGTGCAGCAAATCCCCGCATCATCACAAAATCCT
CGAGGCTAGGCGCGAAGCGGCCTGCAGCGACATAAAAGTCAGCCAGCTGCAGTTCCGCAACCGTACCCGCTCGCAGCTGA
TCTACCAAACCCGGGACCTGTAA

Upstream 100 bases:

>100_bases
ATCGCCATGCTTAATGAACGTTTCCCGGAAGCCGGCGGCGTCGATGACGACGTCATCGAGTTCCTGAAGATCGCCTGTCA
ACAGAAGTGGATCACCTGCC

Downstream 100 bases:

>100_bases
TGACGCTGGCGACCCGCACCGTCATTTTGCCGGGCGGCCTGCAGGCCACCCTGGTCCATCAGCCGCAGGCGGATCGCGCG
GCTGCCCTGGCGCGGGTCGC

Product: pyrroloquinoline quinone biosynthesis protein PqqE

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNQSKPTVNPPLWLLAELTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVFRQARAMGSVQLGFSGGEPLTRKDLPELIR
AARDLGFYTNLITSGIGLTESKLDAFSEAGLDHIQISFQASDEVLNAALAGNKKAFQQKLTMAKAVKARDYPMVLNFVLH
RHNIDQLDKIIELCIELEADDVELATCQFYGWAFLNREGLLPTREQIARAEQVVADYRQKMAASGNLTNLLFVTPDYYEE
RPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVAFPSVLEQSLESIWYDSFGFNRYRGYDWMPEPCRSCDEKEKDFGGCR
CQAFMLTGSADNADPVCSKSPHHHKILEARREAACSDIKVSQLQFRNRTRSQLIYQTRDL

Sequences:

>Translated_380_residues
MNQSKPTVNPPLWLLAELTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVFRQARAMGSVQLGFSGGEPLTRKDLPELIR
AARDLGFYTNLITSGIGLTESKLDAFSEAGLDHIQISFQASDEVLNAALAGNKKAFQQKLTMAKAVKARDYPMVLNFVLH
RHNIDQLDKIIELCIELEADDVELATCQFYGWAFLNREGLLPTREQIARAEQVVADYRQKMAASGNLTNLLFVTPDYYEE
RPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVAFPSVLEQSLESIWYDSFGFNRYRGYDWMPEPCRSCDEKEKDFGGCR
CQAFMLTGSADNADPVCSKSPHHHKILEARREAACSDIKVSQLQFRNRTRSQLIYQTRDL
>Mature_380_residues
MNQSKPTVNPPLWLLAELTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVFRQARAMGSVQLGFSGGEPLTRKDLPELIR
AARDLGFYTNLITSGIGLTESKLDAFSEAGLDHIQISFQASDEVLNAALAGNKKAFQQKLTMAKAVKARDYPMVLNFVLH
RHNIDQLDKIIELCIELEADDVELATCQFYGWAFLNREGLLPTREQIARAEQVVADYRQKMAASGNLTNLLFVTPDYYEE
RPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVAFPSVLEQSLESIWYDSFGFNRYRGYDWMPEPCRSCDEKEKDFGGCR
CQAFMLTGSADNADPVCSKSPHHHKILEARREAACSDIKVSQLQFRNRTRSQLIYQTRDL

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR000385
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42971; Mature: 42971

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01305 MOAA_NIFB_PQQE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSKPTVNPPLWLLAELTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVFRQARAMGSV
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCE
QLGFSGGEPLTRKDLPELIRAARDLGFYTNLITSGIGLTESKLDAFSEAGLDHIQISFQA
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEC
SDEVLNAALAGNKKAFQQKLTMAKAVKARDYPMVLNFVLHRHNIDQLDKIIELCIELEAD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
DVELATCQFYGWAFLNREGLLPTREQIARAEQVVADYRQKMAASGNLTNLLFVTPDYYEE
CCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH
RPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVAFPSVLEQSLESIWYDSFGFNRYRGYD
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
WMPEPCRSCDEKEKDFGGCRCQAFMLTGSADNADPVCSKSPHHHKILEARREAACSDIKV
CCCHHHHCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
SQLQFRNRTRSQLIYQTRDL
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQSKPTVNPPLWLLAELTYRCPLQCPYCSNPLDFARQDKELTTEQWIEVFRQARAMGSV
CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHCCE
QLGFSGGEPLTRKDLPELIRAARDLGFYTNLITSGIGLTESKLDAFSEAGLDHIQISFQA
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEEEC
SDEVLNAALAGNKKAFQQKLTMAKAVKARDYPMVLNFVLHRHNIDQLDKIIELCIELEAD
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
DVELATCQFYGWAFLNREGLLPTREQIARAEQVVADYRQKMAASGNLTNLLFVTPDYYEE
CCEEEEEEECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH
RPKGCMGGWGSIFLSVTPEGTALPCHSARQLPVAFPSVLEQSLESIWYDSFGFNRYRGYD
CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
WMPEPCRSCDEKEKDFGGCRCQAFMLTGSADNADPVCSKSPHHHKILEARREAACSDIKV
CCCHHHHCCCHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
SQLQFRNRTRSQLIYQTRDL
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA