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The map label for this gene is yecD [H]

Identifier: 152970335

GI number: 152970335

Start: 1965792

End: 1966301

Strand: Direct

Name: yecD [H]

Synonym: KPN_01783

Alternate gene names: 152970335

Gene position: 1965792-1966301 (Clockwise)

Preceding gene: 152970333

Following gene: 152970338

Centisome position: 36.98

GC content: 45.69

Gene sequence:

>510_bases
TTGCCTCAAGAAGGCGGAGGCGGCTTTCCGCTGATTGCCGCTACGCGCACAGCAGGCGTACCGGTCATTTATGTCAGCGT
CGGATTCCGCAAGGGGTATCCAGAGGTCAGCAAAAACAACACTATCTTAGCTTCGATTAAGGAGAATGGAGTTTTTATGG
CTGATAACGAGAGCACGGCTATTCATCCTGATGTTGCTCCAGCAGAAAATGAAGTCGTCATCGTCAAACGCAGAGTCGGA
GCTTTCTCGTTTACTGAACTTGAGATGATCCTTCGTGCTCAAGGCATCGAAGACCTGATTCTTACGGGTGTAACTACCAG
TCGTGTGGTGCTTTCCACAGTCGGACAAGCTTTTGATCTGGATTACCGCCTTATCGTTGTGAATGATTATTGCGCAGATC
CAGATCCTGACACCAATATGTTTTTACTTAAAAAAGTTCTACCTCAACATGCTTTTGTTACCAGTTCCTCTGAAATATCA
AAACCTGGGCATAAAACTATGAATTTCTGA

Upstream 100 bases:

>100_bases
GAGCGAAAAGCGGATTTTTGTCGTTCTGTCATCAAAACTGGCGACTTATATTAGGATATCGCAATACCCCTCGCCCTCAG
GCTACGTCTGCTTGAATTGA

Downstream 100 bases:

>100_bases
CGTCAAAAAACGGGAGGATATAACCGGGGATCCCCAGTCATCTGAACGTCCGCTCCTGGTGGCGATAGTCAGCATCATGT
CTGGCCCAGGAGAAATCTCC

Product: putative isochorismatase hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPQEGGGGFPLIAATRTAGVPVIYVSVGFRKGYPEVSKNNTILASIKENGVFMADNESTAIHPDVAPAENEVVIVKRRVG
AFSFTELEMILRAQGIEDLILTGVTTSRVVLSTVGQAFDLDYRLIVVNDYCADPDPDTNMFLLKKVLPQHAFVTSSSEIS
KPGHKTMNF

Sequences:

>Translated_169_residues
MPQEGGGGFPLIAATRTAGVPVIYVSVGFRKGYPEVSKNNTILASIKENGVFMADNESTAIHPDVAPAENEVVIVKRRVG
AFSFTELEMILRAQGIEDLILTGVTTSRVVLSTVGQAFDLDYRLIVVNDYCADPDPDTNMFLLKKVLPQHAFVTSSSEIS
KPGHKTMNF
>Mature_168_residues
PQEGGGGFPLIAATRTAGVPVIYVSVGFRKGYPEVSKNNTILASIKENGVFMADNESTAIHPDVAPAENEVVIVKRRVGA
FSFTELEMILRAQGIEDLILTGVTTSRVVLSTVGQAFDLDYRLIVVNDYCADPDPDTNMFLLKKVLPQHAFVTSSSEISK
PGHKTMNF

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isochorismatase family [H]

Homologues:

Organism=Escherichia coli, GI87081992, Length=150, Percent_Identity=31.3333333333333, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000868 [H]

Pfam domain/function: PF00857 Isochorismatase [H]

EC number: NA

Molecular weight: Translated: 18331; Mature: 18200

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQEGGGGFPLIAATRTAGVPVIYVSVGFRKGYPEVSKNNTILASIKENGVFMADNESTA
CCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCE
IHPDVAPAENEVVIVKRRVGAFSFTELEMILRAQGIEDLILTGVTTSRVVLSTVGQAFDL
ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCHHCCC
DYRLIVVNDYCADPDPDTNMFLLKKVLPQHAFVTSSSEISKPGHKTMNF
CEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
PQEGGGGFPLIAATRTAGVPVIYVSVGFRKGYPEVSKNNTILASIKENGVFMADNESTA
CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEECCCEEEECCCCCE
IHPDVAPAENEVVIVKRRVGAFSFTELEMILRAQGIEDLILTGVTTSRVVLSTVGQAFDL
ECCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHCCHHCCC
DYRLIVVNDYCADPDPDTNMFLLKKVLPQHAFVTSSSEISKPGHKTMNF
CEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]