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The map label for this gene is ytfH [C]

Identifier: 152970326

GI number: 152970326

Start: 1955529

End: 1956086

Strand: Direct

Name: ytfH [C]

Synonym: KPN_01774

Alternate gene names: 152970326

Gene position: 1955529-1956086 (Clockwise)

Preceding gene: 152970324

Following gene: 152970327

Centisome position: 36.79

GC content: 60.39

Gene sequence:

>558_bases
ATGAAAAATGAACCGCTTTGCCGCGCTCCCTGCCCCATCGCCCGCAGCCTGGGCCGCATCGGCGACAGCTGGAGCATCAT
GATCCTGCGCGACGCCTTTGCGGGCTTTACCCGCTTCGACGAATTTCAGAAAAGCAGCAACGTCGCGCCCAATATTCTGT
CGCGCCGCCTGAAGGAACTGGTCGATGACGGACTGCTGGAGAAGGTGTGCTACAGCAGCACCCCGCCGCGCTACGAATAC
CACCTCACGCCGCGCGGCCGCGATTTCCGCATGGTGCTGCTGGCGCTGGCGGAATGGGGTAACCGCCACTTCGCCCCCGA
AGGGCGTCAGATGCAGCTGGTGGAAATGGCAACCCAGCGCCACGTGGAGCCAGTCATGGTGGATAAAGCGACTGGGGAAG
AGATTATCCCGGGTAAATACGCCATGGTGCCGGGCCCCGCCGCCTCGCCGCTGATGAAATATCGTCATGAATATCTGCTG
CGCAAACGCGAAGGCGATAGCGGGCAAAAATTCCAGCCTGAACCTTACAGAGATGCCAGCAATGAATCCGGCCAGTAA

Upstream 100 bases:

>100_bases
CGGCAGCAGCTTCTTCTCCGGGTACCATGAAGAGTAACTTGCATTTTGATAGTGACTATGTCAATTTGCTGGCAAAAGCC
ACCTGCTACCTGGACCTCCC

Downstream 100 bases:

>100_bases
GAAAAATATTCTTGTCCTGGCGGCCCTGGGCGCTGCCGCCCTGGCGGCAGCGAGCTACGGCGCTTACTGGTGGCATACCG
GGCGCTTTATGCAGACCACC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKNEPLCRAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKELVDDGLLEKVCYSSTPPRYEY
HLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVEMATQRHVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLL
RKREGDSGQKFQPEPYRDASNESGQ

Sequences:

>Translated_185_residues
MKNEPLCRAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKELVDDGLLEKVCYSSTPPRYEY
HLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVEMATQRHVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLL
RKREGDSGQKFQPEPYRDASNESGQ
>Mature_185_residues
MKNEPLCRAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKELVDDGLLEKVCYSSTPPRYEY
HLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVEMATQRHVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLL
RKREGDSGQKFQPEPYRDASNESGQ

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 21114; Mature: 21114

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEPLCRAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKEL
CCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VDDGLLEKVCYSSTPPRYEYHLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVEMATQR
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLLRKREGDSGQKFQPEPYRDAS
CCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NESGQ
CCCCC
>Mature Secondary Structure
MKNEPLCRAPCPIARSLGRIGDSWSIMILRDAFAGFTRFDEFQKSSNVAPNILSRRLKEL
CCCCCCCCCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
VDDGLLEKVCYSSTPPRYEYHLTPRGRDFRMVLLALAEWGNRHFAPEGRQMQLVEMATQR
HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
HVEPVMVDKATGEEIIPGKYAMVPGPAASPLMKYRHEYLLRKREGDSGQKFQPEPYRDAS
CCCCEEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
NESGQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]